RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 AP1G2O75843 785 aa11□□□□□ -0.65
CLK4-202ENST00000519132 PPP1R15AO75807 674 aaPredicted RBP11□□□□□ -0.65
CLK4-202ENST00000519132 EN1Q05925 392 aaPredicted RBP11□□□□□ -0.65
CLK4-202ENST00000519132 RTL5Q5HYW3 569 aaPredicted RBP11□□□□□ -0.65
CLK4-202ENST00000519132 PADI6Q6TGC4 694 aa11□□□□□ -0.65
CLK4-202ENST00000519132 NDUFV2P19404 249 aa10.99□□□□□ -0.65
CLK4-202ENST00000519132 VAC14Q08AM6 782 aa10.99□□□□□ -0.65
CLK4-202ENST00000519132 MYT1LQ9UL68 1186 aa10.99□□□□□ -0.65
CLK4-202ENST00000519132 BRD1O95696 1058 aa10.99□□□□□ -0.65
CLK4-202ENST00000519132 FAM9AQ8IZU1 332 aaPredicted RBP10.98□□□□□ -0.65
CLK4-202ENST00000519132 CABLES1Q8TDN4 633 aa10.98□□□□□ -0.65
CLK4-202ENST00000519132 PXYLP1Q8TE99 480 aa10.97□□□□□ -0.65
CLK4-202ENST00000519132 UCN2Q96RP3 112 aa10.97□□□□□ -0.65
CLK4-202ENST00000519132 PCDHGA10Q9Y5H3 936 aa10.97□□□□□ -0.65
CLK4-202ENST00000519132 CFTRP13569 1480 aa10.96□□□□□ -0.65
CLK4-202ENST00000519132 MOXD2PA6NHM9 499 aa10.96□□□□□ -0.65
CLK4-202ENST00000519132 SPIRE2Q8WWL2 714 aa10.96□□□□□ -0.65
CLK4-202ENST00000519132 RIC3Q7Z5B4 369 aa10.96□□□□□ -0.66
CLK4-202ENST00000519132 BOLA1Q9Y3E2 137 aa10.96□□□□□ -0.66
CLK4-202ENST00000519132 SCNN1AP37088 669 aa10.95□□□□□ -0.66
CLK4-202ENST00000519132 PIP4P2Q8N4L2 257 aa10.95□□□□□ -0.66
CLK4-202ENST00000519132 BANK1Q8NDB2 785 aa10.95□□□□□ -0.66
CLK4-202ENST00000519132 LMOD1P29536 600 aaPredicted RBP10.94□□□□□ -0.66
CLK4-202ENST00000519132 EPS8L1Q8TE68 723 aa10.94□□□□□ -0.66
CLK4-202ENST00000519132 GJD4Q96KN9 370 aaPredicted RBP10.94□□□□□ -0.66
CLK4-202ENST00000519132 TMEM121BQ9BXQ6 578 aaPredicted RBP10.94□□□□□ -0.66
CLK4-202ENST00000519132 TMEM88BA6NKF7 163 aa10.94□□□□□ -0.66
CLK4-202ENST00000519132 SND1Q7KZF4 910 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLK4-202ENST00000519132 LAMC3Q9Y6N6 1575 aa10.93□□□□□ -0.66
CLK4-202ENST00000519132 PALM3A6NDB9 673 aaPredicted RBP10.93□□□□□ -0.66
CLK4-202ENST00000519132 USP17L8P0C7I0 530 aa10.93□□□□□ -0.66
CLK4-202ENST00000519132 PPP1R12CQ9BZL4 782 aa10.93□□□□□ -0.66
CLK4-202ENST00000519132 ADGRG1Q9Y653 693 aa10.93□□□□□ -0.66
CLK4-202ENST00000519132 GALR2O43603 387 aaPredicted RBP10.93□□□□□ -0.66
CLK4-202ENST00000519132 PPP2R2DQ66LE6 453 aa10.93□□□□□ -0.66
CLK4-202ENST00000519132 CADPSQ9ULU8 1353 aa10.92□□□□□ -0.66
CLK4-202ENST00000519132 HLA-CQ95604 372 aa10.92□□□□□ -0.66
CLK4-202ENST00000519132 KIAA1522Q9P206 1035 aaPredicted RBP10.92□□□□□ -0.66
CLK4-202ENST00000519132 C3orf80F5H4A9 247 aa10.91□□□□□ -0.66
CLK4-202ENST00000519132 CSB-PGBD3P0DP91 1061 aa10.91□□□□□ -0.66
CLK4-202ENST00000519132 KCNA1Q09470 495 aa10.9□□□□□ -0.66
CLK4-202ENST00000519132 NOM1Q5C9Z4 860 aaKnown RBP10.9□□□□□ -0.66
CLK4-202ENST00000519132 TFIP11Q9UBB9 837 aaKnown RBP10.9□□□□□ -0.66
CLK4-202ENST00000519132 TMEM259Q4ZIN3 620 aa10.89□□□□□ -0.67
CLK4-202ENST00000519132 ZNF710Q8N1W2 664 aa10.88□□□□□ -0.67
CLK4-202ENST00000519132 RSBN1LQ6PCB5 846 aaPredicted RBP10.87□□□□□ -0.67
CLK4-202ENST00000519132 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
CLK4-202ENST00000519132 ATN1P54259 1190 aaPredicted RBP10.86□□□□□ -0.67
CLK4-202ENST00000519132 TRIM34Q9BYJ4 488 aa10.86□□□□□ -0.67
CLK4-202ENST00000519132 TIE1P35590 1138 aa10.86□□□□□ -0.67
CLK4-202ENST00000519132 CTDSPL2Q05D32 466 aa10.86□□□□□ -0.67
CLK4-202ENST00000519132 PRR7Q8TB68 274 aa10.86□□□□□ -0.67
CLK4-202ENST00000519132 VRTNQ9H8Y1 702 aa10.86□□□□□ -0.67
CLK4-202ENST00000519132 IRX5P78411 483 aaPredicted RBP10.85□□□□□ -0.67
CLK4-202ENST00000519132 LRRN4Q8WUT4 740 aa10.85□□□□□ -0.67
CLK4-202ENST00000519132 STK32AQ8WU08 396 aa10.84□□□□□ -0.67
CLK4-202ENST00000519132 FAM198AQ9UFP1 575 aa10.84□□□□□ -0.67
CLK4-202ENST00000519132 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
CLK4-202ENST00000519132 SLAIN1Q8ND83 568 aa10.83□□□□□ -0.68
CLK4-202ENST00000519132 TSC1Q92574 1164 aa10.83□□□□□ -0.68
CLK4-202ENST00000519132 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
CLK4-202ENST00000519132 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
CLK4-202ENST00000519132 LILRB3O75022 631 aa10.82□□□□□ -0.68
CLK4-202ENST00000519132 NUTM2DQ5VT03 806 aaPredicted RBP10.82□□□□□ -0.68
CLK4-202ENST00000519132 NUTM2AQ8IVF1 878 aaPredicted RBP10.82□□□□□ -0.68
CLK4-202ENST00000519132 NESP48681 1621 aa10.82□□□□□ -0.68
CLK4-202ENST00000519132 DDX11L8A8MPP1 907 aa10.82□□□□□ -0.68
CLK4-202ENST00000519132 ABCC8Q09428 1581 aa10.82□□□□□ -0.68
CLK4-202ENST00000519132 PHLDB3Q6NSJ2 640 aa10.82□□□□□ -0.68
CLK4-202ENST00000519132 TXNDC2Q86VQ3 553 aa10.82□□□□□ -0.68
CLK4-202ENST00000519132 FAM177A1Q8N128 213 aaPredicted RBP10.82□□□□□ -0.68
CLK4-202ENST00000519132 IGSF5Q9NSI5 407 aa10.82□□□□□ -0.68
CLK4-202ENST00000519132 TBC1D9Q6ZT07 1266 aa10.81□□□□□ -0.68
CLK4-202ENST00000519132 ANO8Q9HCE9 1232 aaPredicted RBP10.81□□□□□ -0.68
CLK4-202ENST00000519132 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
CLK4-202ENST00000519132 MRRFQ96E11 262 aaKnown RBP10.8□□□□□ -0.68
CLK4-202ENST00000519132 AMOTL2Q9Y2J4 779 aa10.8□□□□□ -0.68
CLK4-202ENST00000519132 SPTLC1O15269 473 aa10.8□□□□□ -0.68
CLK4-202ENST00000519132 CDK11BP21127 795 aaKnown RBP10.8□□□□□ -0.68
CLK4-202ENST00000519132 SLAIN2Q9P270 581 aa10.8□□□□□ -0.68
CLK4-202ENST00000519132 CDK11AQ9UQ88 783 aaPredicted RBP10.8□□□□□ -0.68
CLK4-202ENST00000519132 FANCD2Q9BXW9 1451 aa10.8□□□□□ -0.68
CLK4-202ENST00000519132 WRNQ14191 1432 aaPredicted RBP eCLIP10.8□□□□□ -0.68
CLK4-202ENST00000519132 PDS5BQ9NTI5 1447 aa10.79□□□□□ -0.68
CLK4-202ENST00000519132 PHF14O94880 888 aa10.79□□□□□ -0.68
CLK4-202ENST00000519132 TOP2BQ02880 1626 aa10.78□□□□□ -0.68
CLK4-202ENST00000519132 OATP04181 439 aa10.78□□□□□ -0.68
CLK4-202ENST00000519132 TAGLNQ01995 201 aaKnown RBP10.78□□□□□ -0.68
CLK4-202ENST00000519132 ALG2Q9H553 416 aa10.78□□□□□ -0.68
CLK4-202ENST00000519132 ZMIZ1Q9ULJ6 1067 aa10.78□□□□□ -0.68
CLK4-202ENST00000519132 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
CLK4-202ENST00000519132 PIK3CDO00329 1044 aa10.78□□□□□ -0.68
CLK4-202ENST00000519132 CD46P15529 392 aa10.78□□□□□ -0.68
CLK4-202ENST00000519132 PTCD2Q8WV60 388 aaKnown RBP10.78□□□□□ -0.68
CLK4-202ENST00000519132 SYNJ1O43426 1573 aa10.77□□□□□ -0.68
CLK4-202ENST00000519132 RCCD1A6NED2 376 aa10.77□□□□□ -0.69
CLK4-202ENST00000519132 MAFBQ9Y5Q3 323 aaPredicted RBP10.77□□□□□ -0.69
CLK4-202ENST00000519132 PCDHGC3Q9UN70 934 aa10.77□□□□□ -0.69
CLK4-202ENST00000519132 TMEM164Q5U3C3 297 aa10.76□□□□□ -0.69
CLK4-202ENST00000519132 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms