RNA–Protein interactions for RNA: ENST00000518963.5

PSD3-208, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-208ENST00000518963 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
PSD3-208ENST00000518963 RBM27Q9P2N5 1060 aaKnown RBP8.45□□□□□ -1.06
PSD3-208ENST00000518963 Q6ZNB5 142 aa8.44□□□□□ -1.06
PSD3-208ENST00000518963 PXYLP1Q8TE99 480 aa8.44□□□□□ -1.06
PSD3-208ENST00000518963 TRIM6-TRIM34B2RNG4 842 aa8.43□□□□□ -1.06
PSD3-208ENST00000518963 FAM98CQ17RN3 349 aaKnown RBP8.43□□□□□ -1.06
PSD3-208ENST00000518963 MDM2Q00987 491 aaPredicted RBP8.42□□□□□ -1.06
PSD3-208ENST00000518963 SEPT9Q9UHD8 586 aaPredicted RBP8.42□□□□□ -1.06
PSD3-208ENST00000518963 SMAPO00193 183 aa8.41□□□□□ -1.06
PSD3-208ENST00000518963 OATP04181 439 aa8.41□□□□□ -1.06
PSD3-208ENST00000518963 TTLL12Q14166 644 aaPredicted RBP8.41□□□□□ -1.06
PSD3-208ENST00000518963 LAPTM4AQ15012 233 aa8.41□□□□□ -1.06
PSD3-208ENST00000518963 NUDT18Q6ZVK8 323 aa8.41□□□□□ -1.06
PSD3-208ENST00000518963 IL27Q8NEV9 243 aa8.41□□□□□ -1.06
PSD3-208ENST00000518963 EYA1Q99502 592 aa8.41□□□□□ -1.06
PSD3-208ENST00000518963 TMUB1Q9BVT8 246 aa8.41□□□□□ -1.06
PSD3-208ENST00000518963 FAM117AQ9C073 453 aa8.41□□□□□ -1.06
PSD3-208ENST00000518963 TSR3Q9UJK0 312 aaKnown RBP8.41□□□□□ -1.06
PSD3-208ENST00000518963 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.4□□□□□ -1.06
PSD3-208ENST00000518963 MS4A1P11836 297 aa8.39□□□□□ -1.07
PSD3-208ENST00000518963 TMEM132AQ24JP5 1023 aa8.39□□□□□ -1.07
PSD3-208ENST00000518963 GIGYF2Q6Y7W6 1299 aaKnown RBP8.39□□□□□ -1.07
PSD3-208ENST00000518963 TATDN2Q93075 761 aa8.39□□□□□ -1.07
PSD3-208ENST00000518963 RBM46Q8TBY0 533 aaKnown RBP8.38□□□□□ -1.07
PSD3-208ENST00000518963 LRCH3Q96II8 777 aa8.38□□□□□ -1.07
PSD3-208ENST00000518963 PNMA3Q9UL41 463 aa8.38□□□□□ -1.07
PSD3-208ENST00000518963 HPS5Q9UPZ3 1129 aa8.38□□□□□ -1.07
PSD3-208ENST00000518963 PLEKHG3A1L390 1219 aa8.37□□□□□ -1.07
PSD3-208ENST00000518963 RCCD1A6NED2 376 aa8.37□□□□□ -1.07
PSD3-208ENST00000518963 PACS2Q86VP3 889 aa8.36□□□□□ -1.07
PSD3-208ENST00000518963 GPCPD1Q9NPB8 672 aa8.36□□□□□ -1.07
PSD3-208ENST00000518963 CLCN1P35523 988 aa8.35□□□□□ -1.07
PSD3-208ENST00000518963 NBPF26B4DH59 902 aa8.34□□□□□ -1.07
PSD3-208ENST00000518963 LCE2BO14633 110 aa8.34□□□□□ -1.07
PSD3-208ENST00000518963 SSTR3P32745 418 aaPredicted RBP8.34□□□□□ -1.07
PSD3-208ENST00000518963 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
PSD3-208ENST00000518963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.32□□□□□ -1.08
PSD3-208ENST00000518963 GFRA3O60609 400 aa8.32□□□□□ -1.08
PSD3-208ENST00000518963 TJAP1Q5JTD0 557 aa8.32□□□□□ -1.08
PSD3-208ENST00000518963 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
PSD3-208ENST00000518963 TMEM134Q9H6X4 195 aa8.32□□□□□ -1.08
PSD3-208ENST00000518963 DNAJB2P25686 324 aa8.31□□□□□ -1.08
PSD3-208ENST00000518963 PPP4CP60510 307 aa8.31□□□□□ -1.08
PSD3-208ENST00000518963 DAXXQ9UER7 740 aaPredicted RBP8.3□□□□□ -1.08
PSD3-208ENST00000518963 BEGAINQ9BUH8 593 aa8.29□□□□□ -1.08
PSD3-208ENST00000518963 DDRGK1Q96HY6 314 aa8.28□□□□□ -1.08
PSD3-208ENST00000518963 NRG2O14511 850 aaPredicted RBP8.27□□□□□ -1.09
PSD3-208ENST00000518963 SWT1Q5T5J6 900 aaKnown RBP8.27□□□□□ -1.09
PSD3-208ENST00000518963 SAMD7Q7Z3H4 446 aa8.27□□□□□ -1.09
PSD3-208ENST00000518963 PRKD2Q9BZL6 878 aa8.27□□□□□ -1.09
PSD3-208ENST00000518963 IL21Q9HBE4 155 aa8.27□□□□□ -1.09
PSD3-208ENST00000518963 V9GY48 417 aaPredicted RBP8.27□□□□□ -1.09
PSD3-208ENST00000518963 DDX11L8A8MPP1 907 aa8.26□□□□□ -1.09
PSD3-208ENST00000518963 GTF3C3Q9Y5Q9 886 aa8.26□□□□□ -1.09
PSD3-208ENST00000518963 CD46P15529 392 aa8.25□□□□□ -1.09
PSD3-208ENST00000518963 PPP1R18Q6NYC8 613 aa8.25□□□□□ -1.09
PSD3-208ENST00000518963 MTRQ99707 1265 aa8.25□□□□□ -1.09
PSD3-208ENST00000518963 SLC10A3P09131 477 aa8.24□□□□□ -1.09
PSD3-208ENST00000518963 SULF1Q8IWU6 871 aa8.21□□□□□ -1.1
PSD3-208ENST00000518963 TBC1D2Q9BYX2 928 aa8.21□□□□□ -1.1
PSD3-208ENST00000518963 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.21□□□□□ -1.1
PSD3-208ENST00000518963 MYSM1Q5VVJ2 828 aa8.2□□□□□ -1.1
PSD3-208ENST00000518963 RDH13Q8NBN7 331 aa8.2□□□□□ -1.1
PSD3-208ENST00000518963 PROCA1Q8NCQ7 364 aaPredicted RBP8.2□□□□□ -1.1
PSD3-208ENST00000518963 SPIRE2Q8WWL2 714 aa8.2□□□□□ -1.1
PSD3-208ENST00000518963 ZNF516Q92618 1163 aa8.2□□□□□ -1.1
PSD3-208ENST00000518963 POLR3EQ9NVU0 708 aa8.2□□□□□ -1.1
PSD3-208ENST00000518963 SH3D19Q5HYK7 790 aa8.19□□□□□ -1.1
PSD3-208ENST00000518963 RNF40O75150 1001 aa8.18□□□□□ -1.1
PSD3-208ENST00000518963 GCGRP47871 477 aa8.18□□□□□ -1.1
PSD3-208ENST00000518963 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
PSD3-208ENST00000518963 GOPCQ9HD26 462 aa8.18□□□□□ -1.1
PSD3-208ENST00000518963 APLP1P51693 650 aa8.17□□□□□ -1.1
PSD3-208ENST00000518963 SKIV2LQ15477 1246 aaKnown RBP8.17□□□□□ -1.1
PSD3-208ENST00000518963 FBXO31Q5XUX0 539 aaPredicted RBP8.17□□□□□ -1.1
PSD3-208ENST00000518963 NDUFV2P19404 249 aa8.16□□□□□ -1.1
PSD3-208ENST00000518963 NECTIN2Q92692 538 aa8.16□□□□□ -1.1
PSD3-208ENST00000518963 HLA-CQ95604 372 aa8.16□□□□□ -1.1
PSD3-208ENST00000518963 LIMD1Q9UGP4 676 aa8.16□□□□□ -1.1
PSD3-208ENST00000518963 PDZRN3Q9UPQ7 1066 aa8.16□□□□□ -1.1
PSD3-208ENST00000518963 MOXD2PA6NHM9 499 aa8.15□□□□□ -1.1
PSD3-208ENST00000518963 KDM4AO75164 1064 aa8.15□□□□□ -1.1
PSD3-208ENST00000518963 ZNF787Q6DD87 383 aa8.15□□□□□ -1.1
PSD3-208ENST00000518963 SLF2Q8IX21 1173 aa8.15□□□□□ -1.1
PSD3-208ENST00000518963 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
PSD3-208ENST00000518963 CFHP08603 1231 aa8.14□□□□□ -1.11
PSD3-208ENST00000518963 GGCXP38435 758 aa8.14□□□□□ -1.11
PSD3-208ENST00000518963 NUTM1Q86Y26 1132 aa8.14□□□□□ -1.11
PSD3-208ENST00000518963 NKX2-3Q8TAU0 364 aa8.14□□□□□ -1.11
PSD3-208ENST00000518963 GUCA2AQ02747 115 aa8.13□□□□□ -1.11
PSD3-208ENST00000518963 RIC3Q7Z5B4 369 aa8.13□□□□□ -1.11
PSD3-208ENST00000518963 PCMTD1Q96MG8 357 aaPredicted RBP8.13□□□□□ -1.11
PSD3-208ENST00000518963 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.13□□□□□ -1.11
PSD3-208ENST00000518963 TIMELESSQ9UNS1 1208 aa8.13□□□□□ -1.11
PSD3-208ENST00000518963 PCDHB15Q9Y5E8 787 aa8.13□□□□□ -1.11
PSD3-208ENST00000518963 HOXA2O43364 376 aa8.12□□□□□ -1.11
PSD3-208ENST00000518963 CLK2P49760 499 aaKnown RBP8.12□□□□□ -1.11
PSD3-208ENST00000518963 FUT2Q10981 343 aa8.12□□□□□ -1.11
PSD3-208ENST00000518963 RSBN1LQ6PCB5 846 aaPredicted RBP8.12□□□□□ -1.11
PSD3-208ENST00000518963 SPTLC1O15269 473 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms