RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ZFYVE9	O95405	1425 aa		36.17	■■■■□ 3.38
CNOT7-204	ENST00000518885	SLC4A1AP	Q9BWU0	796 aa	Known RBP	36.14	■■■■□ 3.38
CNOT7-204	ENST00000518885	PLEKHG1	Q9ULL1	1385 aa		36.14	■■■■□ 3.38
CNOT7-204	ENST00000518885	MYO5B	Q9ULV0	1848 aa		36.13	■■■■□ 3.37
CNOT7-204	ENST00000518885	TOM1	O60784	492 aa		36.13	■■■■□ 3.37
CNOT7-204	ENST00000518885	TRPM2	O94759	1503 aa		36.1	■■■■□ 3.37
CNOT7-204	ENST00000518885	SLC26A8	Q96RN1	970 aa		36.09	■■■■□ 3.37
CNOT7-204	ENST00000518885	LRRC7	Q96NW7	1537 aa		36.08	■■■■□ 3.37
CNOT7-204	ENST00000518885	STRCP1	A6NGW2	1772 aa		36.05	■■■■□ 3.36
CNOT7-204	ENST00000518885	KCNA6	P17658	529 aa		36.04	■■■■□ 3.36
CNOT7-204	ENST00000518885	ZNF326	Q5BKZ1	582 aa	Known RBP	36.03	■■■■□ 3.36
CNOT7-204	ENST00000518885	SETD5	Q9C0A6	1442 aa		36	■■■■□ 3.35
CNOT7-204	ENST00000518885	CLTCL1	P53675	1640 aa		35.98	■■■■□ 3.35
CNOT7-204	ENST00000518885	TBX22	Q9Y458	520 aa		35.98	■■■■□ 3.35
CNOT7-204	ENST00000518885	SCAF1	Q9H7N4	1312 aa	Known RBP	35.98	■■■■□ 3.35
CNOT7-204	ENST00000518885	DIP2A	Q14689	1571 aa		35.98	■■■■□ 3.35
CNOT7-204	ENST00000518885	NKTR	P30414	1462 aa	Known RBP	35.96	■■■■□ 3.35
CNOT7-204	ENST00000518885	KIF1B	O60333	1816 aa		35.94	■■■■□ 3.34
CNOT7-204	ENST00000518885	NUTM2D	Q5VT03	806 aa	Predicted RBP	35.94	■■■■□ 3.34
CNOT7-204	ENST00000518885	NWD1	Q149M9	1564 aa		35.93	■■■■□ 3.34
CNOT7-204	ENST00000518885	PIP4K2B	P78356	416 aa		35.93	■■■■□ 3.34
CNOT7-204	ENST00000518885	PIK3R4	Q99570	1358 aa		35.91	■■■■□ 3.34
CNOT7-204	ENST00000518885	PROSER2	Q86WR7	435 aa	Predicted RBP	35.91	■■■■□ 3.34
CNOT7-204	ENST00000518885	MPHOSPH9	Q99550	1183 aa		35.91	■■■■□ 3.34
CNOT7-204	ENST00000518885	SENP3	Q9H4L4	574 aa	Predicted RBP	35.91	■■■■□ 3.34
CNOT7-204	ENST00000518885	TMEM94	Q12767	1356 aa		35.88	■■■■□ 3.33
CNOT7-204	ENST00000518885	ADAMTS13	Q76LX8	1427 aa		35.86	■■■■□ 3.33
CNOT7-204	ENST00000518885	CCDC144A	A2RUR9	1427 aa		35.84	■■■■□ 3.33
CNOT7-204	ENST00000518885	RPGRIP1L	Q68CZ1	1315 aa		35.83	■■■■□ 3.33
CNOT7-204	ENST00000518885	CHD2	O14647	1828 aa	Known RBP	35.83	■■■■□ 3.33
CNOT7-204	ENST00000518885	SETBP1	Q9Y6X0	1596 aa		35.83	■■■■□ 3.33
CNOT7-204	ENST00000518885	NEXMIF	Q5QGS0	1516 aa		35.82	■■■■□ 3.32
CNOT7-204	ENST00000518885	RAB3GAP2	Q9H2M9	1393 aa		35.81	■■■■□ 3.32
CNOT7-204	ENST00000518885	VGF	O15240	615 aa	Predicted RBP	35.81	■■■■□ 3.32
CNOT7-204	ENST00000518885	FOXD1	Q16676	465 aa		35.8	■■■■□ 3.32
CNOT7-204	ENST00000518885	XIRP1	Q702N8	1843 aa	Known RBP	35.78	■■■■□ 3.32
CNOT7-204	ENST00000518885	MSH6	P52701	1360 aa		35.76	■■■■□ 3.32
CNOT7-204	ENST00000518885	NCOA3	Q9Y6Q9	1424 aa		35.76	■■■■□ 3.32
CNOT7-204	ENST00000518885	ALK	Q9UM73	1620 aa		35.75	■■■■□ 3.31
CNOT7-204	ENST00000518885	HRC	P23327	699 aa		35.72	■■■■□ 3.31
CNOT7-204	ENST00000518885	HSPA1L	P34931	641 aa		35.71	■■■■□ 3.31
CNOT7-204	ENST00000518885	NRXN3	Q9Y4C0	1643 aa		35.71	■■■■□ 3.31
CNOT7-204	ENST00000518885	AMOTL2	Q9Y2J4	779 aa		35.7	■■■■□ 3.31
CNOT7-204	ENST00000518885	C14orf37	Q86TY3	774 aa		35.69	■■■■□ 3.3
CNOT7-204	ENST00000518885	RBM33	Q96EV2	1170 aa	Known RBP	35.67	■■■■□ 3.3
CNOT7-204	ENST00000518885	FAM135B	Q49AJ0	1406 aa		35.63	■■■■□ 3.29
CNOT7-204	ENST00000518885	PPL	O60437	1756 aa		35.62	■■■■□ 3.29
CNOT7-204	ENST00000518885	ANKRD30B	Q9BXX2	1392 aa		35.62	■■■■□ 3.29
CNOT7-204	ENST00000518885	PTPRU	Q92729	1446 aa		35.61	■■■■□ 3.29
CNOT7-204	ENST00000518885	SPATA31E1	Q6ZUB1	1445 aa		35.6	■■■■□ 3.29
CNOT7-204	ENST00000518885	MET	P08581	1390 aa		35.6	■■■■□ 3.29
CNOT7-204	ENST00000518885	RGL3	Q3MIN7	710 aa		35.59	■■■■□ 3.29
CNOT7-204	ENST00000518885	C19orf44	Q9H6X5	657 aa		35.59	■■■■□ 3.29
CNOT7-204	ENST00000518885	XRN1	Q8IZH2	1706 aa	Known RBP	35.59	■■■■□ 3.29
CNOT7-204	ENST00000518885	DISP3	Q9P2K9	1392 aa		35.57	■■■■□ 3.28
CNOT7-204	ENST00000518885	CADPS2	Q86UW7	1296 aa		35.57	■■■■□ 3.28
CNOT7-204	ENST00000518885	ATF3	P18847	181 aa		35.56	■■■■□ 3.28
CNOT7-204	ENST00000518885	SLAIN2	Q9P270	581 aa		35.56	■■■■□ 3.28
CNOT7-204	ENST00000518885	DCC	P43146	1447 aa		35.49	■■■■□ 3.27
CNOT7-204	ENST00000518885	ROBO1	Q9Y6N7	1651 aa		35.49	■■■■□ 3.27
CNOT7-204	ENST00000518885	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	35.46	■■■■□ 3.27
CNOT7-204	ENST00000518885	IFT172	Q9UG01	1749 aa		35.46	■■■■□ 3.27
CNOT7-204	ENST00000518885	PTCH1	Q13635	1447 aa		35.46	■■■■□ 3.27
CNOT7-204	ENST00000518885	ADGRF5	Q8IZF2	1346 aa		35.45	■■■■□ 3.27
CNOT7-204	ENST00000518885	SETD1A	O15047	1707 aa	Known RBP	35.45	■■■■□ 3.27
CNOT7-204	ENST00000518885	PRAG1	Q86YV5	1406 aa		35.42	■■■■□ 3.26
CNOT7-204	ENST00000518885	ADGRL3	Q9HAR2	1447 aa		35.4	■■■■□ 3.26
CNOT7-204	ENST00000518885	PIK3C2G	O75747	1445 aa		35.39	■■■■□ 3.26
CNOT7-204	ENST00000518885	MYOM2	P54296	1465 aa		35.37	■■■■□ 3.25
CNOT7-204	ENST00000518885	MED1	Q15648	1581 aa	Predicted RBP	35.34	■■■■□ 3.25
CNOT7-204	ENST00000518885	STAC3	Q96MF2	364 aa		35.33	■■■■□ 3.25
CNOT7-204	ENST00000518885	ROBO2	Q9HCK4	1378 aa		35.33	■■■■□ 3.25
CNOT7-204	ENST00000518885	LAMC1	P11047	1609 aa		35.3	■■■■□ 3.24
CNOT7-204	ENST00000518885	NRXN1	Q9ULB1	1477 aa		35.29	■■■■□ 3.24
CNOT7-204	ENST00000518885	PHLPP1	O60346	1717 aa		35.29	■■■■□ 3.24
CNOT7-204	ENST00000518885	LRPPRC	P42704	1394 aa	Known RBP	35.28	■■■■□ 3.24
CNOT7-204	ENST00000518885	NALCN	Q8IZF0	1738 aa		35.28	■■■■□ 3.24
CNOT7-204	ENST00000518885	TECPR2	O15040	1411 aa		35.26	■■■■□ 3.24
CNOT7-204	ENST00000518885	MST1R	Q04912	1400 aa		35.26	■■■■□ 3.24
CNOT7-204	ENST00000518885	PHF23	Q9BUL5	403 aa	Predicted RBP	35.26	■■■■□ 3.24
CNOT7-204	ENST00000518885	C14orf93	Q9H972	538 aa	Known RBP	35.26	■■■■□ 3.24
CNOT7-204	ENST00000518885	ABCC11	Q96J66	1382 aa		35.25	■■■■□ 3.23
CNOT7-204	ENST00000518885	STK26	Q9P289	416 aa		35.25	■■■■□ 3.23
CNOT7-204	ENST00000518885	BRINP3	Q76B58	766 aa		35.23	■■■■□ 3.23
CNOT7-204	ENST00000518885	DHX57	Q6P158	1386 aa	Known RBP	35.23	■■■■□ 3.23
CNOT7-204	ENST00000518885	AHDC1	Q5TGY3	1603 aa	Predicted RBP	35.22	■■■■□ 3.23
CNOT7-204	ENST00000518885	JCAD	Q9P266	1359 aa		35.22	■■■■□ 3.23
CNOT7-204	ENST00000518885	TMEM132E	Q6IEE7	984 aa		35.21	■■■■□ 3.23
CNOT7-204	ENST00000518885	YTHDC2	Q9H6S0	1430 aa	Known RBP	35.21	■■■■□ 3.23
CNOT7-204	ENST00000518885	KNDC1	Q76NI1	1749 aa		35.2	■■■■□ 3.23
CNOT7-204	ENST00000518885	DCAF11	Q8TEB1	546 aa		35.2	■■■■□ 3.23
CNOT7-204	ENST00000518885	ASXL1	Q8IXJ9	1541 aa		35.19	■■■■□ 3.22
CNOT7-204	ENST00000518885	CFAP70	Q5T0N1	1121 aa		35.17	■■■■□ 3.22
CNOT7-204	ENST00000518885	SIRT1	Q96EB6	747 aa		35.17	■■■■□ 3.22
CNOT7-204	ENST00000518885	COL16A1	Q07092	1604 aa	Predicted RBP	35.16	■■■■□ 3.22
CNOT7-204	ENST00000518885	KDM2A	Q9Y2K7	1162 aa		35.15	■■■■□ 3.22
CNOT7-204	ENST00000518885	CDC42BPG	Q6DT37	1551 aa		35.13	■■■■□ 3.21
CNOT7-204	ENST00000518885	C1orf167	Q5SNV9	1468 aa		35.13	■■■■□ 3.21
CNOT7-204	ENST00000518885	WAPL	Q7Z5K2	1190 aa		35.1	■■■■□ 3.21
CNOT7-204	ENST00000518885	SPATA31A6	Q5VVP1	1343 aa		35.07	■■■■□ 3.21

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms