RNA–Protein interactions for RNA: ENST00000518423.1

IGKV2D-38-201, Transcript of immunoglobulin kappa variable 2D-38 (pseudogene), humanhuman

BASIC

Gene IGKV2D-38, Length 240 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-38-201ENST00000518423 RIMS2Q9UQ26 1411 aa10.16□□□□□ -0.78
IGKV2D-38-201ENST00000518423 KDM5AP29375 1690 aaKnown RBP10.15□□□□□ -0.78
IGKV2D-38-201ENST00000518423 LTKP29376 864 aa10.15□□□□□ -0.78
IGKV2D-38-201ENST00000518423 SLC52A1Q9NWF4 448 aa10.15□□□□□ -0.78
IGKV2D-38-201ENST00000518423 SLIT1O75093 1534 aa10.15□□□□□ -0.78
IGKV2D-38-201ENST00000518423 RAB3GAP2Q9H2M9 1393 aa10.14□□□□□ -0.79
IGKV2D-38-201ENST00000518423 TRPM2O94759 1503 aa10.14□□□□□ -0.79
IGKV2D-38-201ENST00000518423 FBXO41Q8TF61 875 aa10.14□□□□□ -0.79
IGKV2D-38-201ENST00000518423 LTBP4Q8N2S1 1624 aa10.14□□□□□ -0.79
IGKV2D-38-201ENST00000518423 ARHGAP23Q9P227 1491 aa10.13□□□□□ -0.79
IGKV2D-38-201ENST00000518423 UBAP1LF5GYI3 381 aa10.13□□□□□ -0.79
IGKV2D-38-201ENST00000518423 PIP4K2BP78356 416 aa10.13□□□□□ -0.79
IGKV2D-38-201ENST00000518423 STRCP1A6NGW2 1772 aa10.12□□□□□ -0.79
IGKV2D-38-201ENST00000518423 HDGFP51858 240 aaKnown RBP10.12□□□□□ -0.79
IGKV2D-38-201ENST00000518423 CPS1P31327 1500 aa10.12□□□□□ -0.79
IGKV2D-38-201ENST00000518423 MED14O60244 1454 aa10.11□□□□□ -0.79
IGKV2D-38-201ENST00000518423 C14orf37Q86TY3 774 aa10.11□□□□□ -0.79
IGKV2D-38-201ENST00000518423 RBM33Q96EV2 1170 aaKnown RBP10.11□□□□□ -0.79
IGKV2D-38-201ENST00000518423 MPHOSPH9Q99550 1183 aa10.11□□□□□ -0.79
IGKV2D-38-201ENST00000518423 CCDC144AA2RUR9 1427 aa10.1□□□□□ -0.79
IGKV2D-38-201ENST00000518423 RGL3Q3MIN7 710 aa10.1□□□□□ -0.79
IGKV2D-38-201ENST00000518423 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.09□□□□□ -0.79
IGKV2D-38-201ENST00000518423 ZFYVE9O95405 1425 aa10.08□□□□□ -0.8
IGKV2D-38-201ENST00000518423 PLEKHG1Q9ULL1 1385 aa10.07□□□□□ -0.8
IGKV2D-38-201ENST00000518423 PROSER2Q86WR7 435 aaPredicted RBP10.07□□□□□ -0.8
IGKV2D-38-201ENST00000518423 NEXMIFQ5QGS0 1516 aa10.07□□□□□ -0.8
IGKV2D-38-201ENST00000518423 PPLO60437 1756 aa10.06□□□□□ -0.8
IGKV2D-38-201ENST00000518423 LRRC7Q96NW7 1537 aa10.05□□□□□ -0.8
IGKV2D-38-201ENST00000518423 DIP2AQ14689 1571 aa10.05□□□□□ -0.8
IGKV2D-38-201ENST00000518423 IQSEC2Q5JU85 1478 aa10.04□□□□□ -0.8
IGKV2D-38-201ENST00000518423 TOM1O60784 492 aa10.04□□□□□ -0.8
IGKV2D-38-201ENST00000518423 TMEM94Q12767 1356 aa10.03□□□□□ -0.8
IGKV2D-38-201ENST00000518423 XIRP1Q702N8 1843 aaKnown RBP10.03□□□□□ -0.8
IGKV2D-38-201ENST00000518423 NRXN3Q9Y4C0 1643 aa10.03□□□□□ -0.8
IGKV2D-38-201ENST00000518423 CHD2O14647 1828 aaKnown RBP10.03□□□□□ -0.8
IGKV2D-38-201ENST00000518423 NWD1Q149M9 1564 aa10.02□□□□□ -0.81
IGKV2D-38-201ENST00000518423 KCNA6P17658 529 aa10.02□□□□□ -0.81
IGKV2D-38-201ENST00000518423 ADAMTS13Q76LX8 1427 aa10.01□□□□□ -0.81
IGKV2D-38-201ENST00000518423 KDM2AQ9Y2K7 1162 aa10.01□□□□□ -0.81
IGKV2D-38-201ENST00000518423 NKTRP30414 1462 aaKnown RBP10.01□□□□□ -0.81
IGKV2D-38-201ENST00000518423 IFT172Q9UG01 1749 aa10.01□□□□□ -0.81
IGKV2D-38-201ENST00000518423 SETBP1Q9Y6X0 1596 aa10.01□□□□□ -0.81
IGKV2D-38-201ENST00000518423 MSH6P52701 1360 aa10.01□□□□□ -0.81
IGKV2D-38-201ENST00000518423 VGFO15240 615 aaPredicted RBP10□□□□□ -0.81
IGKV2D-38-201ENST00000518423 STK26Q9P289 416 aa10□□□□□ -0.81
IGKV2D-38-201ENST00000518423 AMOTL2Q9Y2J4 779 aa10□□□□□ -0.81
IGKV2D-38-201ENST00000518423 ACIN1Q9UKV3 1341 aaKnown RBP10□□□□□ -0.81
IGKV2D-38-201ENST00000518423 METP08581 1390 aa9.99□□□□□ -0.81
IGKV2D-38-201ENST00000518423 ALKQ9UM73 1620 aa9.98□□□□□ -0.81
IGKV2D-38-201ENST00000518423 TBX22Q9Y458 520 aa9.98□□□□□ -0.81
IGKV2D-38-201ENST00000518423 ADGRF5Q8IZF2 1346 aa9.98□□□□□ -0.81
IGKV2D-38-201ENST00000518423 ROBO1Q9Y6N7 1651 aa9.97□□□□□ -0.81
IGKV2D-38-201ENST00000518423 XRN1Q8IZH2 1706 aaKnown RBP9.97□□□□□ -0.81
IGKV2D-38-201ENST00000518423 HSPA1LP34931 641 aa9.97□□□□□ -0.81
IGKV2D-38-201ENST00000518423 TRIM26Q12899 539 aaPredicted RBP9.97□□□□□ -0.81
IGKV2D-38-201ENST00000518423 NEUROD1Q13562 356 aa9.97□□□□□ -0.81
IGKV2D-38-201ENST00000518423 PPP4R3CPQ6ZMV5 832 aa9.97□□□□□ -0.81
IGKV2D-38-201ENST00000518423 PTPRUQ92729 1446 aa9.97□□□□□ -0.81
IGKV2D-38-201ENST00000518423 ATF3P18847 181 aa9.96□□□□□ -0.82
IGKV2D-38-201ENST00000518423 RPGRIP1LQ68CZ1 1315 aa9.96□□□□□ -0.82
IGKV2D-38-201ENST00000518423 SETD1AO15047 1707 aaKnown RBP9.96□□□□□ -0.82
IGKV2D-38-201ENST00000518423 NALCNQ8IZF0 1738 aa9.96□□□□□ -0.82
IGKV2D-38-201ENST00000518423 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.96□□□□□ -0.82
IGKV2D-38-201ENST00000518423 TMEM132EQ6IEE7 984 aa9.95□□□□□ -0.82
IGKV2D-38-201ENST00000518423 DCAF11Q8TEB1 546 aa9.95□□□□□ -0.82
IGKV2D-38-201ENST00000518423 ANKRD30BQ9BXX2 1392 aa9.95□□□□□ -0.82
IGKV2D-38-201ENST00000518423 SPATA31E1Q6ZUB1 1445 aa9.95□□□□□ -0.82
IGKV2D-38-201ENST00000518423 PHLPP1O60346 1717 aa9.94□□□□□ -0.82
IGKV2D-38-201ENST00000518423 PIK3R4Q99570 1358 aa9.94□□□□□ -0.82
IGKV2D-38-201ENST00000518423 DISP3Q9P2K9 1392 aa9.94□□□□□ -0.82
IGKV2D-38-201ENST00000518423 MAPK8IP2Q13387 824 aaPredicted RBP9.94□□□□□ -0.82
IGKV2D-38-201ENST00000518423 SAFB2Q14151 953 aaKnown RBP eCLIP9.94□□□□□ -0.82
IGKV2D-38-201ENST00000518423 LAMC1P11047 1609 aa9.93□□□□□ -0.82
IGKV2D-38-201ENST00000518423 NUTM2FA1L443 756 aa9.92□□□□□ -0.82
IGKV2D-38-201ENST00000518423 MYOM2P54296 1465 aa9.91□□□□□ -0.82
IGKV2D-38-201ENST00000518423 PIK3C2GO75747 1445 aa9.91□□□□□ -0.82
IGKV2D-38-201ENST00000518423 CFAP70Q5T0N1 1121 aa9.91□□□□□ -0.82
IGKV2D-38-201ENST00000518423 PCGF6Q9BYE7 350 aa9.91□□□□□ -0.82
IGKV2D-38-201ENST00000518423 ASXL1Q8IXJ9 1541 aa9.91□□□□□ -0.82
IGKV2D-38-201ENST00000518423 ROBO2Q9HCK4 1378 aa9.9□□□□□ -0.82
IGKV2D-38-201ENST00000518423 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.82
IGKV2D-38-201ENST00000518423 SIN3AQ96ST3 1273 aa9.9□□□□□ -0.82
IGKV2D-38-201ENST00000518423 SLAIN2Q9P270 581 aa9.9□□□□□ -0.82
IGKV2D-38-201ENST00000518423 ADGRL3Q9HAR2 1447 aa9.9□□□□□ -0.83
IGKV2D-38-201ENST00000518423 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
IGKV2D-38-201ENST00000518423 HRCP23327 699 aa9.89□□□□□ -0.83
IGKV2D-38-201ENST00000518423 C19orf44Q9H6X5 657 aa9.89□□□□□ -0.83
IGKV2D-38-201ENST00000518423 POGKQ9P215 609 aa9.89□□□□□ -0.83
IGKV2D-38-201ENST00000518423 TRAK1Q9UPV9 953 aa9.89□□□□□ -0.83
IGKV2D-38-201ENST00000518423 KNDC1Q76NI1 1749 aa9.89□□□□□ -0.83
IGKV2D-38-201ENST00000518423 DHX57Q6P158 1386 aaKnown RBP9.88□□□□□ -0.83
IGKV2D-38-201ENST00000518423 MED1Q15648 1581 aaPredicted RBP9.88□□□□□ -0.83
IGKV2D-38-201ENST00000518423 WAPLQ7Z5K2 1190 aa9.88□□□□□ -0.83
IGKV2D-38-201ENST00000518423 PTCH1Q13635 1447 aa9.88□□□□□ -0.83
IGKV2D-38-201ENST00000518423 YTHDC2Q9H6S0 1430 aaKnown RBP9.88□□□□□ -0.83
IGKV2D-38-201ENST00000518423 PLEKHH1Q9ULM0 1364 aa9.88□□□□□ -0.83
IGKV2D-38-201ENST00000518423 LRPPRCP42704 1394 aaKnown RBP9.87□□□□□ -0.83
IGKV2D-38-201ENST00000518423 MEX3CQ5U5Q3 659 aaKnown RBP9.86□□□□□ -0.83
IGKV2D-38-201ENST00000518423 POTEDQ86YR6 584 aa9.86□□□□□ -0.83
IGKV2D-38-201ENST00000518423 DDX17Q92841 729 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms