RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 SLKQ9H2G2 1235 aaPredicted RBP12.67□□□□□ -0.38
ARFGEF1-203ENST00000518230 PLA2R1Q13018 1463 aa12.66□□□□□ -0.38
ARFGEF1-203ENST00000518230 ARXQ96QS3 562 aa12.66□□□□□ -0.38
ARFGEF1-203ENST00000518230 BCAR3O75815 825 aa12.65□□□□□ -0.38
ARFGEF1-203ENST00000518230 IGHDP01880 384 aa12.65□□□□□ -0.38
ARFGEF1-203ENST00000518230 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
ARFGEF1-203ENST00000518230 AFAP1Q8N556 730 aa12.65□□□□□ -0.38
ARFGEF1-203ENST00000518230 USP19O94966 1318 aa12.65□□□□□ -0.38
ARFGEF1-203ENST00000518230 UNC13BO14795 1591 aa12.65□□□□□ -0.38
ARFGEF1-203ENST00000518230 ABCC1P33527 1531 aa12.65□□□□□ -0.38
ARFGEF1-203ENST00000518230 DUOX2Q9NRD8 1548 aa12.65□□□□□ -0.38
ARFGEF1-203ENST00000518230 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
ARFGEF1-203ENST00000518230 CCDC146Q8IYE0 955 aa12.64□□□□□ -0.39
ARFGEF1-203ENST00000518230 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
ARFGEF1-203ENST00000518230 RRAGDQ9NQL2 400 aaPredicted RBP12.64□□□□□ -0.39
ARFGEF1-203ENST00000518230 PRAG1Q86YV5 1406 aa12.64□□□□□ -0.39
ARFGEF1-203ENST00000518230 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.64□□□□□ -0.39
ARFGEF1-203ENST00000518230 WDR7Q9Y4E6 1490 aa12.63□□□□□ -0.39
ARFGEF1-203ENST00000518230 CCDC144AA2RUR9 1427 aa12.63□□□□□ -0.39
ARFGEF1-203ENST00000518230 ERBINQ96RT1 1412 aa12.63□□□□□ -0.39
ARFGEF1-203ENST00000518230 PPP2R1AP30153 589 aa12.62□□□□□ -0.39
ARFGEF1-203ENST00000518230 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
ARFGEF1-203ENST00000518230 TRPM1Q7Z4N2 1603 aa12.62□□□□□ -0.39
ARFGEF1-203ENST00000518230 SPAG9O60271 1321 aaKnown RBP12.62□□□□□ -0.39
ARFGEF1-203ENST00000518230 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
ARFGEF1-203ENST00000518230 ARAP3Q8WWN8 1544 aa12.61□□□□□ -0.39
ARFGEF1-203ENST00000518230 MAGI2Q86UL8 1455 aa12.61□□□□□ -0.39
ARFGEF1-203ENST00000518230 COL17A1Q9UMD9 1497 aaPredicted RBP12.61□□□□□ -0.39
ARFGEF1-203ENST00000518230 IQGAP3Q86VI3 1631 aa12.61□□□□□ -0.39
ARFGEF1-203ENST00000518230 TMF1P82094 1093 aa12.61□□□□□ -0.39
ARFGEF1-203ENST00000518230 INSRP06213 1382 aa12.61□□□□□ -0.39
ARFGEF1-203ENST00000518230 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
ARFGEF1-203ENST00000518230 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
ARFGEF1-203ENST00000518230 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
ARFGEF1-203ENST00000518230 APAF1O14727 1248 aa12.59□□□□□ -0.39
ARFGEF1-203ENST00000518230 ATP10AO60312 1499 aa12.58□□□□□ -0.4
ARFGEF1-203ENST00000518230 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
ARFGEF1-203ENST00000518230 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
ARFGEF1-203ENST00000518230 FANCAO15360 1455 aa12.58□□□□□ -0.4
ARFGEF1-203ENST00000518230 DMRT2Q9Y5R5 561 aa12.58□□□□□ -0.4
ARFGEF1-203ENST00000518230 PANK1Q8TE04 598 aa12.57□□□□□ -0.4
ARFGEF1-203ENST00000518230 A2MP01023 1474 aa12.57□□□□□ -0.4
ARFGEF1-203ENST00000518230 COG6Q9Y2V7 657 aa12.56□□□□□ -0.4
ARFGEF1-203ENST00000518230 ZFYVE16Q7Z3T8 1539 aa12.56□□□□□ -0.4
ARFGEF1-203ENST00000518230 ABCA9Q8IUA7 1624 aa12.56□□□□□ -0.4
ARFGEF1-203ENST00000518230 BECN1Q14457 450 aa12.56□□□□□ -0.4
ARFGEF1-203ENST00000518230 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
ARFGEF1-203ENST00000518230 GZF1Q9H116 711 aaPredicted RBP12.56□□□□□ -0.4
ARFGEF1-203ENST00000518230 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
ARFGEF1-203ENST00000518230 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
ARFGEF1-203ENST00000518230 ANTXR1Q9H6X2 564 aa12.55□□□□□ -0.4
ARFGEF1-203ENST00000518230 SCAPERQ9BY12 1400 aa12.55□□□□□ -0.4
ARFGEF1-203ENST00000518230 EIF3AQ14152 1382 aaKnown RBP12.54□□□□□ -0.4
ARFGEF1-203ENST00000518230 XRCC6P12956 609 aaKnown RBP eCLIP12.54□□□□□ -0.4
ARFGEF1-203ENST00000518230 L1TD1Q5T7N2 865 aaKnown RBP12.53□□□□□ -0.4
ARFGEF1-203ENST00000518230 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
ARFGEF1-203ENST00000518230 PRDM15P57071 1507 aaPredicted RBP12.53□□□□□ -0.4
ARFGEF1-203ENST00000518230 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
ARFGEF1-203ENST00000518230 CANXP27824 592 aaKnown RBP12.53□□□□□ -0.4
ARFGEF1-203ENST00000518230 CLUAP1Q96AJ1 413 aa12.52□□□□□ -0.41
ARFGEF1-203ENST00000518230 TBC1D2Q9BYX2 928 aa12.52□□□□□ -0.41
ARFGEF1-203ENST00000518230 NKTRP30414 1462 aaKnown RBP12.52□□□□□ -0.41
ARFGEF1-203ENST00000518230 NAP1L5Q96NT1 182 aaPredicted RBP12.52□□□□□ -0.41
ARFGEF1-203ENST00000518230 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
ARFGEF1-203ENST00000518230 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
ARFGEF1-203ENST00000518230 NPM1P06748 294 aaKnown RBP eCLIP12.51□□□□□ -0.41
ARFGEF1-203ENST00000518230 KIF3BO15066 747 aa12.51□□□□□ -0.41
ARFGEF1-203ENST00000518230 INO80Q9ULG1 1556 aaPredicted RBP12.5□□□□□ -0.41
ARFGEF1-203ENST00000518230 TNNQ9UQP3 1299 aa12.5□□□□□ -0.41
ARFGEF1-203ENST00000518230 MAPK8IP3Q9UPT6 1336 aa12.5□□□□□ -0.41
ARFGEF1-203ENST00000518230 NLRP1Q9C000 1473 aa12.5□□□□□ -0.41
ARFGEF1-203ENST00000518230 E9PSI1 815 aa12.5□□□□□ -0.41
ARFGEF1-203ENST00000518230 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
ARFGEF1-203ENST00000518230 GOLGA6L3A6NEY3 463 aa12.49□□□□□ -0.41
ARFGEF1-203ENST00000518230 PTPRTO14522 1441 aa12.49□□□□□ -0.41
ARFGEF1-203ENST00000518230 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
ARFGEF1-203ENST00000518230 PCDHB15Q9Y5E8 787 aa12.48□□□□□ -0.41
ARFGEF1-203ENST00000518230 DEPDC5O75140 1603 aa12.48□□□□□ -0.41
ARFGEF1-203ENST00000518230 PDE3AQ14432 1141 aa12.48□□□□□ -0.41
ARFGEF1-203ENST00000518230 TBC1D32Q96NH3 1257 aa12.48□□□□□ -0.41
ARFGEF1-203ENST00000518230 CENPJQ9HC77 1338 aaPredicted RBP12.48□□□□□ -0.41
ARFGEF1-203ENST00000518230 AEBP2Q6ZN18 517 aaPredicted RBP12.47□□□□□ -0.41
ARFGEF1-203ENST00000518230 PNNQ9H307 717 aaKnown RBP12.47□□□□□ -0.41
ARFGEF1-203ENST00000518230 UPF2Q9HAU5 1272 aaKnown RBP12.47□□□□□ -0.41
ARFGEF1-203ENST00000518230 PDZRN3Q9UPQ7 1066 aa12.47□□□□□ -0.41
ARFGEF1-203ENST00000518230 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
ARFGEF1-203ENST00000518230 MCM4P33991 863 aa12.46□□□□□ -0.41
ARFGEF1-203ENST00000518230 BCL2L13Q9BXK5 485 aa12.46□□□□□ -0.41
ARFGEF1-203ENST00000518230 RLBP1P12271 317 aa12.46□□□□□ -0.41
ARFGEF1-203ENST00000518230 TRPM2O94759 1503 aa12.46□□□□□ -0.41
ARFGEF1-203ENST00000518230 KANK1Q14678 1352 aa12.46□□□□□ -0.42
ARFGEF1-203ENST00000518230 FSD2A1L4K1 749 aa12.46□□□□□ -0.42
ARFGEF1-203ENST00000518230 RRP7AQ9Y3A4 280 aaKnown RBP12.46□□□□□ -0.42
ARFGEF1-203ENST00000518230 CD109Q6YHK3 1445 aa12.45□□□□□ -0.42
ARFGEF1-203ENST00000518230 LAMC1P11047 1609 aa12.45□□□□□ -0.42
ARFGEF1-203ENST00000518230 WWC1Q8IX03 1113 aa12.45□□□□□ -0.42
ARFGEF1-203ENST00000518230 VSIG10Q8N0Z9 540 aa12.44□□□□□ -0.42
ARFGEF1-203ENST00000518230 TET3O43151 1660 aa12.44□□□□□ -0.42
ARFGEF1-203ENST00000518230 TRAK2O60296 914 aa12.44□□□□□ -0.42
ARFGEF1-203ENST00000518230 PKNOX2Q96KN3 472 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms