RNA–Protein interactions for RNA: ENST00000518081.1

EFCAB13-204, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-204ENST00000518081 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.29
EFCAB13-204ENST00000518081 SWT1Q5T5J6 900 aaKnown RBP13.27□□□□□ -0.29
EFCAB13-204ENST00000518081 LAPTM4BQ86VI4 370 aa13.27□□□□□ -0.29
EFCAB13-204ENST00000518081 NBPF3Q9H094 633 aa13.27□□□□□ -0.29
EFCAB13-204ENST00000518081 CD46P15529 392 aa13.26□□□□□ -0.29
EFCAB13-204ENST00000518081 SULF1Q8IWU6 871 aa13.26□□□□□ -0.29
EFCAB13-204ENST00000518081 ANKRD13DQ6ZTN6 518 aa13.25□□□□□ -0.29
EFCAB13-204ENST00000518081 HRO43593 1189 aa13.24□□□□□ -0.29
EFCAB13-204ENST00000518081 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
EFCAB13-204ENST00000518081 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
EFCAB13-204ENST00000518081 GOPCQ9HD26 462 aa13.23□□□□□ -0.29
EFCAB13-204ENST00000518081 SAMD7Q7Z3H4 446 aa13.21□□□□□ -0.29
EFCAB13-204ENST00000518081 ZFRQ96KR1 1074 aaKnown RBP13.21□□□□□ -0.29
EFCAB13-204ENST00000518081 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
EFCAB13-204ENST00000518081 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
EFCAB13-204ENST00000518081 RDH13Q8NBN7 331 aa13.2□□□□□ -0.3
EFCAB13-204ENST00000518081 KRTAP3-3Q9BYR6 98 aa13.2□□□□□ -0.3
EFCAB13-204ENST00000518081 KRTAP3-2Q9BYR7 98 aa13.2□□□□□ -0.3
EFCAB13-204ENST00000518081 SLC10A3P09131 477 aa13.19□□□□□ -0.3
EFCAB13-204ENST00000518081 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
EFCAB13-204ENST00000518081 SKIV2LQ15477 1246 aaKnown RBP13.17□□□□□ -0.3
EFCAB13-204ENST00000518081 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
EFCAB13-204ENST00000518081 MYSM1Q5VVJ2 828 aa13.17□□□□□ -0.3
EFCAB13-204ENST00000518081 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
EFCAB13-204ENST00000518081 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
EFCAB13-204ENST00000518081 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
EFCAB13-204ENST00000518081 PCMTD1Q96MG8 357 aaPredicted RBP13.16□□□□□ -0.3
EFCAB13-204ENST00000518081 DIXDC1Q155Q3 683 aa13.15□□□□□ -0.3
EFCAB13-204ENST00000518081 POTEGQ6S5H5 508 aa13.15□□□□□ -0.3
EFCAB13-204ENST00000518081 POLR3EQ9NVU0 708 aa13.15□□□□□ -0.3
EFCAB13-204ENST00000518081 GCGRP47871 477 aa13.14□□□□□ -0.31
EFCAB13-204ENST00000518081 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
EFCAB13-204ENST00000518081 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
EFCAB13-204ENST00000518081 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
EFCAB13-204ENST00000518081 POTEMA6NI47 508 aa13.12□□□□□ -0.31
EFCAB13-204ENST00000518081 GOLGA8CPA6NN73 597 aa13.11□□□□□ -0.31
EFCAB13-204ENST00000518081 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
EFCAB13-204ENST00000518081 RNF40O75150 1001 aa13.1□□□□□ -0.31
EFCAB13-204ENST00000518081 KDM4AO75164 1064 aa13.1□□□□□ -0.31
EFCAB13-204ENST00000518081 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
EFCAB13-204ENST00000518081 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.1□□□□□ -0.31
EFCAB13-204ENST00000518081 CLK2P49760 499 aaKnown RBP13.09□□□□□ -0.31
EFCAB13-204ENST00000518081 MOXD2PA6NHM9 499 aa13.08□□□□□ -0.32
EFCAB13-204ENST00000518081 RIC3Q7Z5B4 369 aa13.08□□□□□ -0.32
EFCAB13-204ENST00000518081 ANKK1Q8NFD2 765 aa13.08□□□□□ -0.32
EFCAB13-204ENST00000518081 SPTLC1O15269 473 aa13.07□□□□□ -0.32
EFCAB13-204ENST00000518081 NDUFV2P19404 249 aa13.07□□□□□ -0.32
EFCAB13-204ENST00000518081 LIMD1Q9UGP4 676 aa13.07□□□□□ -0.32
EFCAB13-204ENST00000518081 ATP1B4Q9UN42 357 aaPredicted RBP13.07□□□□□ -0.32
EFCAB13-204ENST00000518081 CFHP08603 1231 aa13.06□□□□□ -0.32
EFCAB13-204ENST00000518081 SOWAHBA6NEL2 793 aa13.05□□□□□ -0.32
EFCAB13-204ENST00000518081 USP46P62068 366 aa13.05□□□□□ -0.32
EFCAB13-204ENST00000518081 RSBN1LQ6PCB5 846 aaPredicted RBP13.05□□□□□ -0.32
EFCAB13-204ENST00000518081 WNT2BQ93097 391 aa13.05□□□□□ -0.32
EFCAB13-204ENST00000518081 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.05□□□□□ -0.32
EFCAB13-204ENST00000518081 BCAMP50895 628 aa13.04□□□□□ -0.32
EFCAB13-204ENST00000518081 HOXA2O43364 376 aa13.03□□□□□ -0.32
EFCAB13-204ENST00000518081 TIMELESSQ9UNS1 1208 aa13.03□□□□□ -0.32
EFCAB13-204ENST00000518081 GJA5P36382 358 aa13.02□□□□□ -0.33
EFCAB13-204ENST00000518081 TUSC1Q2TAM9 212 aa13.02□□□□□ -0.33
EFCAB13-204ENST00000518081 NECTIN2Q92692 538 aa13.02□□□□□ -0.33
EFCAB13-204ENST00000518081 PPP4CP60510 307 aa13.01□□□□□ -0.33
EFCAB13-204ENST00000518081 FUT2Q10981 343 aa13.01□□□□□ -0.33
EFCAB13-204ENST00000518081 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
EFCAB13-204ENST00000518081 HPS5Q9UPZ3 1129 aa13.01□□□□□ -0.33
EFCAB13-204ENST00000518081 HLA-CQ95604 372 aa13□□□□□ -0.33
EFCAB13-204ENST00000518081 PCDHB15Q9Y5E8 787 aa13□□□□□ -0.33
EFCAB13-204ENST00000518081 CSPP1Q1MSJ5 1256 aa12.99□□□□□ -0.33
EFCAB13-204ENST00000518081 FBXO31Q5XUX0 539 aaPredicted RBP12.99□□□□□ -0.33
EFCAB13-204ENST00000518081 TSR3Q9UJK0 312 aaKnown RBP12.99□□□□□ -0.33
EFCAB13-204ENST00000518081 FDX1P10109 184 aa12.98□□□□□ -0.33
EFCAB13-204ENST00000518081 GUCA2AQ02747 115 aa12.98□□□□□ -0.33
EFCAB13-204ENST00000518081 ACTN4O43707 911 aaKnown RBP12.97□□□□□ -0.33
EFCAB13-204ENST00000518081 ATP6V1AP38606 617 aa12.97□□□□□ -0.33
EFCAB13-204ENST00000518081 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
EFCAB13-204ENST00000518081 ERICH6Q7L0X2 663 aa12.97□□□□□ -0.33
EFCAB13-204ENST00000518081 C14orf37Q86TY3 774 aa12.96□□□□□ -0.33
EFCAB13-204ENST00000518081 PCDHGC3Q9UN70 934 aa12.96□□□□□ -0.33
EFCAB13-204ENST00000518081 QPCTQ16769 361 aa12.95□□□□□ -0.34
EFCAB13-204ENST00000518081 PPP2R2DQ66LE6 453 aa12.95□□□□□ -0.34
EFCAB13-204ENST00000518081 KCTD12Q96CX2 325 aaKnown RBP12.95□□□□□ -0.34
EFCAB13-204ENST00000518081 LILRB3O75022 631 aa12.94□□□□□ -0.34
EFCAB13-204ENST00000518081 APLP1P51693 650 aa12.94□□□□□ -0.34
EFCAB13-204ENST00000518081 THSD4Q6ZMP0 1018 aa12.94□□□□□ -0.34
EFCAB13-204ENST00000518081 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
EFCAB13-204ENST00000518081 RFC5P40937 340 aa12.93□□□□□ -0.34
EFCAB13-204ENST00000518081 PRR14Q9BWN1 585 aa12.93□□□□□ -0.34
EFCAB13-204ENST00000518081 PUS10Q3MIT2 529 aaKnown RBP12.92□□□□□ -0.34
EFCAB13-204ENST00000518081 PRPF38BQ5VTL8 546 aaKnown RBP12.92□□□□□ -0.34
EFCAB13-204ENST00000518081 CABLES1Q8TDN4 633 aa12.92□□□□□ -0.34
EFCAB13-204ENST00000518081 HRCP23327 699 aa12.91□□□□□ -0.34
EFCAB13-204ENST00000518081 RTL5Q5HYW3 569 aaPredicted RBP12.91□□□□□ -0.34
EFCAB13-204ENST00000518081 MORN1Q5T089 497 aa12.91□□□□□ -0.34
EFCAB13-204ENST00000518081 ZBTB3Q9H5J0 574 aa12.9□□□□□ -0.34
EFCAB13-204ENST00000518081 NUTM2BA6NNL0 878 aaPredicted RBP12.89□□□□□ -0.35
EFCAB13-204ENST00000518081 NUTM2EB1AL46 878 aaPredicted RBP12.89□□□□□ -0.35
EFCAB13-204ENST00000518081 FLIIQ13045 1269 aa12.89□□□□□ -0.35
EFCAB13-204ENST00000518081 NUTM2DQ5VT03 806 aaPredicted RBP12.89□□□□□ -0.35
EFCAB13-204ENST00000518081 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
EFCAB13-204ENST00000518081 SLC27A5Q9Y2P5 690 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms