RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 PLEKHG1Q9ULL1 1385 aa12.93□□□□□ -0.34
CTNNA1-204ENST00000517656 NKTRP30414 1462 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-204ENST00000517656 TMEM131LA2VDJ0 1609 aa12.92□□□□□ -0.34
CTNNA1-204ENST00000517656 IQGAP3Q86VI3 1631 aa12.92□□□□□ -0.34
CTNNA1-204ENST00000517656 HDGFP51858 240 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-204ENST00000517656 NWD1Q149M9 1564 aa12.92□□□□□ -0.34
CTNNA1-204ENST00000517656 RIMS2Q9UQ26 1411 aa12.92□□□□□ -0.34
CTNNA1-204ENST00000517656 FAM135BQ49AJ0 1406 aa12.91□□□□□ -0.34
CTNNA1-204ENST00000517656 PROSER2Q86WR7 435 aaPredicted RBP12.91□□□□□ -0.34
CTNNA1-204ENST00000517656 BCANQ96GW7 911 aa12.91□□□□□ -0.34
CTNNA1-204ENST00000517656 NUP155O75694 1391 aa12.91□□□□□ -0.34
CTNNA1-204ENST00000517656 E9PCH4 1651 aa12.9□□□□□ -0.34
CTNNA1-204ENST00000517656 PPP1R15AO75807 674 aaPredicted RBP12.9□□□□□ -0.34
CTNNA1-204ENST00000517656 ITGAEP38570 1179 aa12.9□□□□□ -0.34
CTNNA1-204ENST00000517656 PPARGC1BQ86YN6 1023 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-204ENST00000517656 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.89□□□□□ -0.35
CTNNA1-204ENST00000517656 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-204ENST00000517656 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-204ENST00000517656 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
CTNNA1-204ENST00000517656 MYO5BQ9ULV0 1848 aa12.87□□□□□ -0.35
CTNNA1-204ENST00000517656 MSH6P52701 1360 aa12.86□□□□□ -0.35
CTNNA1-204ENST00000517656 FOXD1Q16676 465 aa12.86□□□□□ -0.35
CTNNA1-204ENST00000517656 ADAMTS13Q76LX8 1427 aa12.86□□□□□ -0.35
CTNNA1-204ENST00000517656 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-204ENST00000517656 DIP2AQ14689 1571 aa12.85□□□□□ -0.35
CTNNA1-204ENST00000517656 PIK3R4Q99570 1358 aa12.84□□□□□ -0.35
CTNNA1-204ENST00000517656 CHD2O14647 1828 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-204ENST00000517656 NUTM2DQ5VT03 806 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-204ENST00000517656 NCOA3Q9Y6Q9 1424 aa12.84□□□□□ -0.35
CTNNA1-204ENST00000517656 ROBO1Q9Y6N7 1651 aa12.83□□□□□ -0.35
CTNNA1-204ENST00000517656 ADRA2BP18089 450 aa12.82□□□□□ -0.36
CTNNA1-204ENST00000517656 SLAIN2Q9P270 581 aa12.82□□□□□ -0.36
CTNNA1-204ENST00000517656 NAIPQ13075 1403 aa12.8□□□□□ -0.36
CTNNA1-204ENST00000517656 TRPM2O94759 1503 aa12.8□□□□□ -0.36
CTNNA1-204ENST00000517656 SPHKAPQ2M3C7 1700 aa12.79□□□□□ -0.36
CTNNA1-204ENST00000517656 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
CTNNA1-204ENST00000517656 C14orf37Q86TY3 774 aa12.78□□□□□ -0.36
CTNNA1-204ENST00000517656 AMOTL2Q9Y2J4 779 aa12.78□□□□□ -0.36
CTNNA1-204ENST00000517656 PTPRUQ92729 1446 aa12.78□□□□□ -0.36
CTNNA1-204ENST00000517656 SETBP1Q9Y6X0 1596 aa12.77□□□□□ -0.36
CTNNA1-204ENST00000517656 ZNF326Q5BKZ1 582 aaKnown RBP12.77□□□□□ -0.37
CTNNA1-204ENST00000517656 CADPS2Q86UW7 1296 aa12.77□□□□□ -0.37
CTNNA1-204ENST00000517656 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.37
CTNNA1-204ENST00000517656 NRXN3Q9Y4C0 1643 aa12.77□□□□□ -0.37
CTNNA1-204ENST00000517656 HFM1A2PYH4 1435 aa12.76□□□□□ -0.37
CTNNA1-204ENST00000517656 ATF3P18847 181 aa12.75□□□□□ -0.37
CTNNA1-204ENST00000517656 CLTCL1P53675 1640 aa12.75□□□□□ -0.37
CTNNA1-204ENST00000517656 JCADQ9P266 1359 aa12.75□□□□□ -0.37
CTNNA1-204ENST00000517656 PHLPP1O60346 1717 aa12.74□□□□□ -0.37
CTNNA1-204ENST00000517656 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.74□□□□□ -0.37
CTNNA1-204ENST00000517656 NEXMIFQ5QGS0 1516 aa12.74□□□□□ -0.37
CTNNA1-204ENST00000517656 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
CTNNA1-204ENST00000517656 COL16A1Q07092 1604 aaPredicted RBP12.73□□□□□ -0.37
CTNNA1-204ENST00000517656 DCCP43146 1447 aa12.73□□□□□ -0.37
CTNNA1-204ENST00000517656 METP08581 1390 aa12.73□□□□□ -0.37
CTNNA1-204ENST00000517656 AHDC1Q5TGY3 1603 aaPredicted RBP12.72□□□□□ -0.37
CTNNA1-204ENST00000517656 POTEAQ6S8J7 498 aa12.71□□□□□ -0.37
CTNNA1-204ENST00000517656 TRIM52Q96A61 297 aa12.71□□□□□ -0.37
CTNNA1-204ENST00000517656 BRINP3Q76B58 766 aa12.7□□□□□ -0.38
CTNNA1-204ENST00000517656 SPATA31A6Q5VVP1 1343 aa12.69□□□□□ -0.38
CTNNA1-204ENST00000517656 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-204ENST00000517656 MST1RQ04912 1400 aa12.69□□□□□ -0.38
CTNNA1-204ENST00000517656 KIF1BO60333 1816 aa12.68□□□□□ -0.38
CTNNA1-204ENST00000517656 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
CTNNA1-204ENST00000517656 ADGRL3Q9HAR2 1447 aa12.68□□□□□ -0.38
CTNNA1-204ENST00000517656 RPGRIP1LQ68CZ1 1315 aa12.67□□□□□ -0.38
CTNNA1-204ENST00000517656 LRP6O75581 1613 aa12.67□□□□□ -0.38
CTNNA1-204ENST00000517656 ASXL1Q8IXJ9 1541 aa12.67□□□□□ -0.38
CTNNA1-204ENST00000517656 PTCH1Q13635 1447 aa12.66□□□□□ -0.38
CTNNA1-204ENST00000517656 SHPRHQ149N8 1683 aa12.66□□□□□ -0.38
CTNNA1-204ENST00000517656 PRAG1Q86YV5 1406 aa12.65□□□□□ -0.38
CTNNA1-204ENST00000517656 SETD5Q9C0A6 1442 aa12.64□□□□□ -0.39
CTNNA1-204ENST00000517656 SETD1AO15047 1707 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-204ENST00000517656 NALCNQ8IZF0 1738 aa12.63□□□□□ -0.39
CTNNA1-204ENST00000517656 MEX3CQ5U5Q3 659 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-204ENST00000517656 ROBO2Q9HCK4 1378 aa12.63□□□□□ -0.39
CTNNA1-204ENST00000517656 NHSL1Q5SYE7 1610 aa12.62□□□□□ -0.39
CTNNA1-204ENST00000517656 CCDC144AA2RUR9 1427 aa12.62□□□□□ -0.39
CTNNA1-204ENST00000517656 C1orf167Q5SNV9 1468 aa12.61□□□□□ -0.39
CTNNA1-204ENST00000517656 ZNF772Q68DY9 489 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-204ENST00000517656 LRRC59Q96AG4 307 aaKnown RBP12.61□□□□□ -0.39
CTNNA1-204ENST00000517656 PPLO60437 1756 aa12.61□□□□□ -0.39
CTNNA1-204ENST00000517656 MPHOSPH9Q99550 1183 aa12.6□□□□□ -0.39
CTNNA1-204ENST00000517656 SPATA31E1Q6ZUB1 1445 aa12.6□□□□□ -0.39
CTNNA1-204ENST00000517656 DDX17Q92841 729 aaKnown RBP12.59□□□□□ -0.39
CTNNA1-204ENST00000517656 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
CTNNA1-204ENST00000517656 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
CTNNA1-204ENST00000517656 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
CTNNA1-204ENST00000517656 ADGRF5Q8IZF2 1346 aa12.58□□□□□ -0.4
CTNNA1-204ENST00000517656 ACIN1Q9UKV3 1341 aaKnown RBP12.58□□□□□ -0.4
CTNNA1-204ENST00000517656 PNPLA6Q8IY17 1366 aa12.57□□□□□ -0.4
CTNNA1-204ENST00000517656 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
CTNNA1-204ENST00000517656 LAMC1P11047 1609 aa12.57□□□□□ -0.4
CTNNA1-204ENST00000517656 RGL3Q3MIN7 710 aa12.56□□□□□ -0.4
CTNNA1-204ENST00000517656 ORAI2Q96SN7 254 aa12.56□□□□□ -0.4
CTNNA1-204ENST00000517656 SOS2Q07890 1332 aaPredicted RBP12.56□□□□□ -0.4
CTNNA1-204ENST00000517656 TECPR2O15040 1411 aa12.55□□□□□ -0.4
CTNNA1-204ENST00000517656 AFF2P51816 1311 aa12.55□□□□□ -0.4
CTNNA1-204ENST00000517656 CDC42BPGQ6DT37 1551 aa12.55□□□□□ -0.4
CTNNA1-204ENST00000517656 LRPPRCP42704 1394 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms