RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 SEC24BO95487 1268 aa16.02■□□□□ 0.16
PCM1-203ENST00000517545 APAF1O14727 1248 aa16.01■□□□□ 0.15
PCM1-203ENST00000517545 SAMD9LQ8IVG5 1584 aa16.01■□□□□ 0.15
PCM1-203ENST00000517545 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
PCM1-203ENST00000517545 POGKQ9P215 609 aa16.01■□□□□ 0.15
PCM1-203ENST00000517545 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
PCM1-203ENST00000517545 CHD1O14646 1710 aa15.99■□□□□ 0.15
PCM1-203ENST00000517545 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
PCM1-203ENST00000517545 MYO5CQ9NQX4 1742 aa15.99■□□□□ 0.15
PCM1-203ENST00000517545 SLKQ9H2G2 1235 aaPredicted RBP15.98■□□□□ 0.15
PCM1-203ENST00000517545 EIF2AK4Q9P2K8 1649 aaKnown RBP15.97■□□□□ 0.15
PCM1-203ENST00000517545 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
PCM1-203ENST00000517545 NUP160Q12769 1436 aa15.96■□□□□ 0.15
PCM1-203ENST00000517545 FAM43AQ8N2R8 423 aa15.96■□□□□ 0.15
PCM1-203ENST00000517545 SYCP2Q9BX26 1530 aa15.96■□□□□ 0.15
PCM1-203ENST00000517545 PANK1Q8TE04 598 aa15.95■□□□□ 0.14
PCM1-203ENST00000517545 UNC13BO14795 1591 aa15.95■□□□□ 0.14
PCM1-203ENST00000517545 CDC42BPBQ9Y5S2 1711 aa15.95■□□□□ 0.14
PCM1-203ENST00000517545 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
PCM1-203ENST00000517545 COG6Q9Y2V7 657 aa15.94■□□□□ 0.14
PCM1-203ENST00000517545 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
PCM1-203ENST00000517545 PIK3C2GO75747 1445 aa15.94■□□□□ 0.14
PCM1-203ENST00000517545 E9PSI1 815 aa15.93■□□□□ 0.14
PCM1-203ENST00000517545 ASXL1Q8IXJ9 1541 aa15.93■□□□□ 0.14
PCM1-203ENST00000517545 RNF17Q9BXT8 1623 aaKnown RBP15.92■□□□□ 0.14
PCM1-203ENST00000517545 UBE2Q2Q8WVN8 375 aa15.92■□□□□ 0.14
PCM1-203ENST00000517545 CLUAP1Q96AJ1 413 aa15.92■□□□□ 0.14
PCM1-203ENST00000517545 PREX2Q70Z35 1606 aa15.9■□□□□ 0.14
PCM1-203ENST00000517545 IQGAP3Q86VI3 1631 aa15.9■□□□□ 0.14
PCM1-203ENST00000517545 CANXP27824 592 aaKnown RBP15.9■□□□□ 0.14
PCM1-203ENST00000517545 CGNL1Q0VF96 1302 aa15.9■□□□□ 0.14
PCM1-203ENST00000517545 NLRP1Q9C000 1473 aa15.9■□□□□ 0.14
PCM1-203ENST00000517545 BECN1Q14457 450 aa15.89■□□□□ 0.13
PCM1-203ENST00000517545 ARXQ96QS3 562 aa15.89■□□□□ 0.13
PCM1-203ENST00000517545 CENPJQ9HC77 1338 aaPredicted RBP15.89■□□□□ 0.13
PCM1-203ENST00000517545 MAPK8IP3Q9UPT6 1336 aa15.89■□□□□ 0.13
PCM1-203ENST00000517545 ATP10AO60312 1499 aa15.89■□□□□ 0.13
PCM1-203ENST00000517545 CDCA8Q53HL2 280 aa15.89■□□□□ 0.13
PCM1-203ENST00000517545 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
PCM1-203ENST00000517545 RRAGDQ9NQL2 400 aaPredicted RBP15.89■□□□□ 0.13
PCM1-203ENST00000517545 SYNMO15061 1565 aa15.89■□□□□ 0.13
PCM1-203ENST00000517545 PDE3AQ14432 1141 aa15.88■□□□□ 0.13
PCM1-203ENST00000517545 ANTXR1Q9H6X2 564 aa15.88■□□□□ 0.13
PCM1-203ENST00000517545 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
PCM1-203ENST00000517545 ARHGAP5Q13017 1502 aa15.88■□□□□ 0.13
PCM1-203ENST00000517545 TNNQ9UQP3 1299 aa15.87■□□□□ 0.13
PCM1-203ENST00000517545 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
PCM1-203ENST00000517545 MADDQ8WXG6 1647 aa15.86■□□□□ 0.13
PCM1-203ENST00000517545 IQGAP1P46940 1657 aa15.86■□□□□ 0.13
PCM1-203ENST00000517545 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
PCM1-203ENST00000517545 NEUROD2Q15784 382 aa15.85■□□□□ 0.13
PCM1-203ENST00000517545 WWC1Q8IX03 1113 aa15.85■□□□□ 0.13
PCM1-203ENST00000517545 PCDHB15Q9Y5E8 787 aa15.85■□□□□ 0.13
PCM1-203ENST00000517545 SPRYD3Q8NCJ5 442 aa15.85■□□□□ 0.13
PCM1-203ENST00000517545 MAST1Q9Y2H9 1570 aa15.85■□□□□ 0.13
PCM1-203ENST00000517545 NPC1L1Q9UHC9 1359 aa15.85■□□□□ 0.13
PCM1-203ENST00000517545 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
PCM1-203ENST00000517545 CARD14Q9BXL6 1004 aa15.85■□□□□ 0.13
PCM1-203ENST00000517545 TBC1D2Q9BYX2 928 aa15.85■□□□□ 0.13
PCM1-203ENST00000517545 RLBP1P12271 317 aa15.84■□□□□ 0.13
PCM1-203ENST00000517545 TTC37Q6PGP7 1564 aa15.84■□□□□ 0.13
PCM1-203ENST00000517545 MYOM1P52179 1685 aa15.84■□□□□ 0.13
PCM1-203ENST00000517545 RRP7AQ9Y3A4 280 aaKnown RBP15.84■□□□□ 0.13
PCM1-203ENST00000517545 BCL2L13Q9BXK5 485 aa15.84■□□□□ 0.13
PCM1-203ENST00000517545 TBC1D32Q96NH3 1257 aa15.83■□□□□ 0.13
PCM1-203ENST00000517545 PDZRN3Q9UPQ7 1066 aa15.82■□□□□ 0.12
PCM1-203ENST00000517545 DUOX2Q9NRD8 1548 aa15.81■□□□□ 0.12
PCM1-203ENST00000517545 PLXNC1O60486 1568 aa15.81■□□□□ 0.12
PCM1-203ENST00000517545 RARSP54136 660 aaKnown RBP15.81■□□□□ 0.12
PCM1-203ENST00000517545 L1TD1Q5T7N2 865 aaKnown RBP15.81■□□□□ 0.12
PCM1-203ENST00000517545 ERCC6L2Q5T890 1561 aa15.81■□□□□ 0.12
PCM1-203ENST00000517545 GZF1Q9H116 711 aaPredicted RBP15.8■□□□□ 0.12
PCM1-203ENST00000517545 UPF2Q9HAU5 1272 aaKnown RBP15.8■□□□□ 0.12
PCM1-203ENST00000517545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.8■□□□□ 0.12
PCM1-203ENST00000517545 NINLQ9Y2I6 1382 aa15.79■□□□□ 0.12
PCM1-203ENST00000517545 XRCC6P12956 609 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCM1-203ENST00000517545 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
PCM1-203ENST00000517545 SCAPERQ9BY12 1400 aa15.79■□□□□ 0.12
PCM1-203ENST00000517545 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
PCM1-203ENST00000517545 PANK2Q9BZ23 570 aa15.79■□□□□ 0.12
PCM1-203ENST00000517545 CFAP70Q5T0N1 1121 aa15.77■□□□□ 0.12
PCM1-203ENST00000517545 NGEFQ8N5V2 710 aa15.77■□□□□ 0.11
PCM1-203ENST00000517545 ERVK-7P63135 1459 aa15.75■□□□□ 0.11
PCM1-203ENST00000517545 GOLGA6L3A6NEY3 463 aa15.75■□□□□ 0.11
PCM1-203ENST00000517545 MCM4P33991 863 aa15.75■□□□□ 0.11
PCM1-203ENST00000517545 TCP11L2Q8N4U5 519 aa15.75■□□□□ 0.11
PCM1-203ENST00000517545 SPHKAPQ2M3C7 1700 aa15.75■□□□□ 0.11
PCM1-203ENST00000517545 KDM5AP29375 1690 aaKnown RBP15.75■□□□□ 0.11
PCM1-203ENST00000517545 FSD2A1L4K1 749 aa15.74■□□□□ 0.11
PCM1-203ENST00000517545 POLR3AO14802 1390 aaPredicted RBP15.74■□□□□ 0.11
PCM1-203ENST00000517545 CEP152O94986 1710 aa15.73■□□□□ 0.11
PCM1-203ENST00000517545 TRPM2O94759 1503 aa15.73■□□□□ 0.11
PCM1-203ENST00000517545 CLTCL1P53675 1640 aa15.73■□□□□ 0.11
PCM1-203ENST00000517545 TRAPPC8Q9Y2L5 1435 aa15.72■□□□□ 0.11
PCM1-203ENST00000517545 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
PCM1-203ENST00000517545 SLC24A1O60721 1099 aa15.72■□□□□ 0.11
PCM1-203ENST00000517545 MFAP1P55081 439 aaKnown RBP15.72■□□□□ 0.11
PCM1-203ENST00000517545 RUNDC1Q96C34 613 aa15.72■□□□□ 0.11
PCM1-203ENST00000517545 ADGRF5Q8IZF2 1346 aa15.71■□□□□ 0.11
PCM1-203ENST00000517545 MORC1Q86VD1 984 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms