RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 HDGFP51858 240 aaKnown RBP21.1■□□□□ 0.97
PDGFRB-202ENST00000517488 BCANQ96GW7 911 aa21.1■□□□□ 0.97
PDGFRB-202ENST00000517488 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
PDGFRB-202ENST00000517488 PLEKHG1Q9ULL1 1385 aa21.07■□□□□ 0.96
PDGFRB-202ENST00000517488 FOXD1Q16676 465 aa21.06■□□□□ 0.96
PDGFRB-202ENST00000517488 SETD5Q9C0A6 1442 aa21.04■□□□□ 0.96
PDGFRB-202ENST00000517488 LRRC7Q96NW7 1537 aa21.04■□□□□ 0.96
PDGFRB-202ENST00000517488 MYO5BQ9ULV0 1848 aa21.04■□□□□ 0.96
PDGFRB-202ENST00000517488 SPHKAPQ2M3C7 1700 aa21.04■□□□□ 0.96
PDGFRB-202ENST00000517488 STRCP1A6NGW2 1772 aa21.03■□□□□ 0.96
PDGFRB-202ENST00000517488 KCNA6P17658 529 aa21.03■□□□□ 0.96
PDGFRB-202ENST00000517488 MPHOSPH9Q99550 1183 aa21.03■□□□□ 0.96
PDGFRB-202ENST00000517488 TRPM2O94759 1503 aa21.03■□□□□ 0.96
PDGFRB-202ENST00000517488 ZNF326Q5BKZ1 582 aaKnown RBP21.02■□□□□ 0.96
PDGFRB-202ENST00000517488 TOM1O60784 492 aa21■□□□□ 0.95
PDGFRB-202ENST00000517488 TBX22Q9Y458 520 aa21■□□□□ 0.95
PDGFRB-202ENST00000517488 CLTCL1P53675 1640 aa21■□□□□ 0.95
PDGFRB-202ENST00000517488 RAB3GAP2Q9H2M9 1393 aa20.98■□□□□ 0.95
PDGFRB-202ENST00000517488 ADAMTS13Q76LX8 1427 aa20.98■□□□□ 0.95
PDGFRB-202ENST00000517488 PIP4K2BP78356 416 aa20.98■□□□□ 0.95
PDGFRB-202ENST00000517488 PROSER2Q86WR7 435 aaPredicted RBP20.96■□□□□ 0.95
PDGFRB-202ENST00000517488 RBM33Q96EV2 1170 aaKnown RBP20.96■□□□□ 0.95
PDGFRB-202ENST00000517488 SCAF1Q9H7N4 1312 aaKnown RBP20.95■□□□□ 0.94
PDGFRB-202ENST00000517488 TMEM94Q12767 1356 aa20.95■□□□□ 0.94
PDGFRB-202ENST00000517488 ACIN1Q9UKV3 1341 aaKnown RBP20.94■□□□□ 0.94
PDGFRB-202ENST00000517488 ALKQ9UM73 1620 aa20.92■□□□□ 0.94
PDGFRB-202ENST00000517488 NWD1Q149M9 1564 aa20.9■□□□□ 0.94
PDGFRB-202ENST00000517488 NEXMIFQ5QGS0 1516 aa20.9■□□□□ 0.94
PDGFRB-202ENST00000517488 NKTRP30414 1462 aaKnown RBP20.89■□□□□ 0.94
PDGFRB-202ENST00000517488 CCDC144AA2RUR9 1427 aa20.89■□□□□ 0.94
PDGFRB-202ENST00000517488 PIK3R4Q99570 1358 aa20.88■□□□□ 0.93
PDGFRB-202ENST00000517488 RPGRIP1LQ68CZ1 1315 aa20.88■□□□□ 0.93
PDGFRB-202ENST00000517488 HSPA1LP34931 641 aa20.87■□□□□ 0.93
PDGFRB-202ENST00000517488 AMOTL2Q9Y2J4 779 aa20.87■□□□□ 0.93
PDGFRB-202ENST00000517488 PTPRUQ92729 1446 aa20.87■□□□□ 0.93
PDGFRB-202ENST00000517488 DIP2AQ14689 1571 aa20.86■□□□□ 0.93
PDGFRB-202ENST00000517488 SETBP1Q9Y6X0 1596 aa20.86■□□□□ 0.93
PDGFRB-202ENST00000517488 VGFO15240 615 aaPredicted RBP20.86■□□□□ 0.93
PDGFRB-202ENST00000517488 METP08581 1390 aa20.85■□□□□ 0.93
PDGFRB-202ENST00000517488 HRCP23327 699 aa20.85■□□□□ 0.93
PDGFRB-202ENST00000517488 RGL3Q3MIN7 710 aa20.85■□□□□ 0.93
PDGFRB-202ENST00000517488 NRXN3Q9Y4C0 1643 aa20.85■□□□□ 0.93
PDGFRB-202ENST00000517488 KIF1BO60333 1816 aa20.84■□□□□ 0.93
PDGFRB-202ENST00000517488 SPATA31E1Q6ZUB1 1445 aa20.84■□□□□ 0.93
PDGFRB-202ENST00000517488 CHD2O14647 1828 aaKnown RBP20.83■□□□□ 0.92
PDGFRB-202ENST00000517488 XIRP1Q702N8 1843 aaKnown RBP20.83■□□□□ 0.92
PDGFRB-202ENST00000517488 MSH6P52701 1360 aa20.8■□□□□ 0.92
PDGFRB-202ENST00000517488 ADGRF5Q8IZF2 1346 aa20.79■□□□□ 0.92
PDGFRB-202ENST00000517488 C14orf37Q86TY3 774 aa20.78■□□□□ 0.92
PDGFRB-202ENST00000517488 NCOA3Q9Y6Q9 1424 aa20.78■□□□□ 0.92
PDGFRB-202ENST00000517488 ANKRD30BQ9BXX2 1392 aa20.77■□□□□ 0.92
PDGFRB-202ENST00000517488 C19orf44Q9H6X5 657 aa20.75■□□□□ 0.91
PDGFRB-202ENST00000517488 SLAIN2Q9P270 581 aa20.75■□□□□ 0.91
PDGFRB-202ENST00000517488 FAM135BQ49AJ0 1406 aa20.75■□□□□ 0.91
PDGFRB-202ENST00000517488 XRN1Q8IZH2 1706 aaKnown RBP20.72■□□□□ 0.91
PDGFRB-202ENST00000517488 PPLO60437 1756 aa20.72■□□□□ 0.91
PDGFRB-202ENST00000517488 ATF3P18847 181 aa20.7■□□□□ 0.9
PDGFRB-202ENST00000517488 CADPS2Q86UW7 1296 aa20.7■□□□□ 0.9
PDGFRB-202ENST00000517488 DISP3Q9P2K9 1392 aa20.7■□□□□ 0.9
PDGFRB-202ENST00000517488 ROBO2Q9HCK4 1378 aa20.69■□□□□ 0.9
PDGFRB-202ENST00000517488 TMEM132EQ6IEE7 984 aa20.66■□□□□ 0.9
PDGFRB-202ENST00000517488 PIK3C2GO75747 1445 aa20.66■□□□□ 0.9
PDGFRB-202ENST00000517488 SETD1AO15047 1707 aaKnown RBP20.66■□□□□ 0.9
PDGFRB-202ENST00000517488 PTCH1Q13635 1447 aa20.65■□□□□ 0.9
PDGFRB-202ENST00000517488 STK26Q9P289 416 aa20.64■□□□□ 0.89
PDGFRB-202ENST00000517488 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.64■□□□□ 0.89
PDGFRB-202ENST00000517488 PRAG1Q86YV5 1406 aa20.63■□□□□ 0.89
PDGFRB-202ENST00000517488 ADGRL3Q9HAR2 1447 aa20.63■□□□□ 0.89
PDGFRB-202ENST00000517488 C14orf93Q9H972 538 aaKnown RBP20.63■□□□□ 0.89
PDGFRB-202ENST00000517488 ROBO1Q9Y6N7 1651 aa20.63■□□□□ 0.89
PDGFRB-202ENST00000517488 DCCP43146 1447 aa20.62■□□□□ 0.89
PDGFRB-202ENST00000517488 IFT172Q9UG01 1749 aa20.62■□□□□ 0.89
PDGFRB-202ENST00000517488 CFAP70Q5T0N1 1121 aa20.62■□□□□ 0.89
PDGFRB-202ENST00000517488 NRXN1Q9ULB1 1477 aa20.62■□□□□ 0.89
PDGFRB-202ENST00000517488 KDM2AQ9Y2K7 1162 aa20.61■□□□□ 0.89
PDGFRB-202ENST00000517488 MYOM2P54296 1465 aa20.61■□□□□ 0.89
PDGFRB-202ENST00000517488 LRPPRCP42704 1394 aaKnown RBP20.6■□□□□ 0.89
PDGFRB-202ENST00000517488 DCAF11Q8TEB1 546 aa20.6■□□□□ 0.89
PDGFRB-202ENST00000517488 ASXL1Q8IXJ9 1541 aa20.59■□□□□ 0.89
PDGFRB-202ENST00000517488 BRINP3Q76B58 766 aa20.59■□□□□ 0.89
PDGFRB-202ENST00000517488 MST1RQ04912 1400 aa20.59■□□□□ 0.89
PDGFRB-202ENST00000517488 ABCC11Q96J66 1382 aa20.59■□□□□ 0.89
PDGFRB-202ENST00000517488 WAPLQ7Z5K2 1190 aa20.58■□□□□ 0.89
PDGFRB-202ENST00000517488 DHX57Q6P158 1386 aaKnown RBP20.58■□□□□ 0.88
PDGFRB-202ENST00000517488 TECPR2O15040 1411 aa20.57■□□□□ 0.88
PDGFRB-202ENST00000517488 YTHDC2Q9H6S0 1430 aaKnown RBP20.56■□□□□ 0.88
PDGFRB-202ENST00000517488 ILDR2Q71H61 639 aa20.55■□□□□ 0.88
PDGFRB-202ENST00000517488 PLEKHH1Q9ULM0 1364 aa20.55■□□□□ 0.88
PDGFRB-202ENST00000517488 MED1Q15648 1581 aaPredicted RBP20.55■□□□□ 0.88
PDGFRB-202ENST00000517488 NALCNQ8IZF0 1738 aa20.53■□□□□ 0.88
PDGFRB-202ENST00000517488 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.88
PDGFRB-202ENST00000517488 STAC3Q96MF2 364 aa20.52■□□□□ 0.88
PDGFRB-202ENST00000517488 C1orf167Q5SNV9 1468 aa20.51■□□□□ 0.87
PDGFRB-202ENST00000517488 DDX17Q92841 729 aaKnown RBP20.5■□□□□ 0.87
PDGFRB-202ENST00000517488 SIRT1Q96EB6 747 aa20.5■□□□□ 0.87
PDGFRB-202ENST00000517488 JCADQ9P266 1359 aa20.49■□□□□ 0.87
PDGFRB-202ENST00000517488 ORAI2Q96SN7 254 aa20.49■□□□□ 0.87
PDGFRB-202ENST00000517488 AHDC1Q5TGY3 1603 aaPredicted RBP20.48■□□□□ 0.87
PDGFRB-202ENST00000517488 PHLPP1O60346 1717 aa20.47■□□□□ 0.87
PDGFRB-202ENST00000517488 PRAM1Q96QH2 718 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms