RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 TMEM131LA2VDJ0 1609 aa22.46■■□□□ 1.19
SCARNA20.5-201ENST00000516991 IQGAP3Q86VI3 1631 aa22.46■■□□□ 1.19
SCARNA20.5-201ENST00000516991 SLC26A8Q96RN1 970 aa22.45■■□□□ 1.18
SCARNA20.5-201ENST00000516991 PLEKHG1Q9ULL1 1385 aa22.45■■□□□ 1.18
SCARNA20.5-201ENST00000516991 E9PCH4 1651 aa22.45■■□□□ 1.18
SCARNA20.5-201ENST00000516991 HDGFP51858 240 aaKnown RBP22.44■■□□□ 1.18
SCARNA20.5-201ENST00000516991 FAM135BQ49AJ0 1406 aa22.44■■□□□ 1.18
SCARNA20.5-201ENST00000516991 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
SCARNA20.5-201ENST00000516991 RIMS2Q9UQ26 1411 aa22.43■■□□□ 1.18
SCARNA20.5-201ENST00000516991 PPP1R15AO75807 674 aaPredicted RBP22.41■■□□□ 1.18
SCARNA20.5-201ENST00000516991 PROSER2Q86WR7 435 aaPredicted RBP22.41■■□□□ 1.18
SCARNA20.5-201ENST00000516991 BCANQ96GW7 911 aa22.41■■□□□ 1.18
SCARNA20.5-201ENST00000516991 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
SCARNA20.5-201ENST00000516991 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.39■■□□□ 1.17
SCARNA20.5-201ENST00000516991 CHD2O14647 1828 aaKnown RBP22.38■■□□□ 1.17
SCARNA20.5-201ENST00000516991 DIP2AQ14689 1571 aa22.38■■□□□ 1.17
SCARNA20.5-201ENST00000516991 MSH6P52701 1360 aa22.38■■□□□ 1.17
SCARNA20.5-201ENST00000516991 ROBO1Q9Y6N7 1651 aa22.37■■□□□ 1.17
SCARNA20.5-201ENST00000516991 NUP155O75694 1391 aa22.36■■□□□ 1.17
SCARNA20.5-201ENST00000516991 CHGAP10645 457 aaKnown RBP22.34■■□□□ 1.17
SCARNA20.5-201ENST00000516991 TBX22Q9Y458 520 aa22.33■■□□□ 1.17
SCARNA20.5-201ENST00000516991 NCOA3Q9Y6Q9 1424 aa22.31■■□□□ 1.16
SCARNA20.5-201ENST00000516991 PIK3R4Q99570 1358 aa22.31■■□□□ 1.16
SCARNA20.5-201ENST00000516991 ITGAEP38570 1179 aa22.31■■□□□ 1.16
SCARNA20.5-201ENST00000516991 SPHKAPQ2M3C7 1700 aa22.3■■□□□ 1.16
SCARNA20.5-201ENST00000516991 ADAMTS13Q76LX8 1427 aa22.3■■□□□ 1.16
SCARNA20.5-201ENST00000516991 RBM33Q96EV2 1170 aaKnown RBP22.29■■□□□ 1.16
SCARNA20.5-201ENST00000516991 TRPM2O94759 1503 aa22.28■■□□□ 1.16
SCARNA20.5-201ENST00000516991 SLAIN2Q9P270 581 aa22.25■■□□□ 1.15
SCARNA20.5-201ENST00000516991 PHLPP1O60346 1717 aa22.25■■□□□ 1.15
SCARNA20.5-201ENST00000516991 RRBP1Q9P2E9 1410 aaKnown RBP22.23■■□□□ 1.15
SCARNA20.5-201ENST00000516991 SETBP1Q9Y6X0 1596 aa22.21■■□□□ 1.15
SCARNA20.5-201ENST00000516991 NUTM2DQ5VT03 806 aaPredicted RBP22.21■■□□□ 1.15
SCARNA20.5-201ENST00000516991 C14orf37Q86TY3 774 aa22.21■■□□□ 1.15
SCARNA20.5-201ENST00000516991 PPARGC1BQ86YN6 1023 aaKnown RBP22.21■■□□□ 1.15
SCARNA20.5-201ENST00000516991 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.2■■□□□ 1.14
SCARNA20.5-201ENST00000516991 JCADQ9P266 1359 aa22.19■■□□□ 1.14
SCARNA20.5-201ENST00000516991 NRXN3Q9Y4C0 1643 aa22.18■■□□□ 1.14
SCARNA20.5-201ENST00000516991 CADPS2Q86UW7 1296 aa22.18■■□□□ 1.14
SCARNA20.5-201ENST00000516991 RGS17Q9UGC6 210 aaPredicted RBP22.18■■□□□ 1.14
SCARNA20.5-201ENST00000516991 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
SCARNA20.5-201ENST00000516991 COL16A1Q07092 1604 aaPredicted RBP22.17■■□□□ 1.14
SCARNA20.5-201ENST00000516991 C19orf44Q9H6X5 657 aa22.17■■□□□ 1.14
SCARNA20.5-201ENST00000516991 DCCP43146 1447 aa22.16■■□□□ 1.14
SCARNA20.5-201ENST00000516991 NAIPQ13075 1403 aa22.16■■□□□ 1.14
SCARNA20.5-201ENST00000516991 CLTCL1P53675 1640 aa22.16■■□□□ 1.14
SCARNA20.5-201ENST00000516991 PTPRUQ92729 1446 aa22.15■■□□□ 1.14
SCARNA20.5-201ENST00000516991 ATF3P18847 181 aa22.15■■□□□ 1.14
SCARNA20.5-201ENST00000516991 AMOTL2Q9Y2J4 779 aa22.15■■□□□ 1.14
SCARNA20.5-201ENST00000516991 AHDC1Q5TGY3 1603 aaPredicted RBP22.15■■□□□ 1.14
SCARNA20.5-201ENST00000516991 ZNF326Q5BKZ1 582 aaKnown RBP22.14■■□□□ 1.13
SCARNA20.5-201ENST00000516991 KIF1BO60333 1816 aa22.13■■□□□ 1.13
SCARNA20.5-201ENST00000516991 NEXMIFQ5QGS0 1516 aa22.12■■□□□ 1.13
SCARNA20.5-201ENST00000516991 HFM1A2PYH4 1435 aa22.1■■□□□ 1.13
SCARNA20.5-201ENST00000516991 SPATA31A6Q5VVP1 1343 aa22.08■■□□□ 1.13
SCARNA20.5-201ENST00000516991 SHPRHQ149N8 1683 aa22.08■■□□□ 1.13
SCARNA20.5-201ENST00000516991 POTEAQ6S8J7 498 aa22.07■■□□□ 1.12
SCARNA20.5-201ENST00000516991 METP08581 1390 aa22.06■■□□□ 1.12
SCARNA20.5-201ENST00000516991 ASXL1Q8IXJ9 1541 aa22.04■■□□□ 1.12
SCARNA20.5-201ENST00000516991 ADGRL3Q9HAR2 1447 aa22.04■■□□□ 1.12
SCARNA20.5-201ENST00000516991 BRINP3Q76B58 766 aa22.03■■□□□ 1.12
SCARNA20.5-201ENST00000516991 MST1RQ04912 1400 aa22.03■■□□□ 1.12
SCARNA20.5-201ENST00000516991 LRP6O75581 1613 aa22.02■■□□□ 1.11
SCARNA20.5-201ENST00000516991 TRIM52Q96A61 297 aa22.01■■□□□ 1.11
SCARNA20.5-201ENST00000516991 NHSL1Q5SYE7 1610 aa22.01■■□□□ 1.11
SCARNA20.5-201ENST00000516991 NALCNQ8IZF0 1738 aa22■■□□□ 1.11
SCARNA20.5-201ENST00000516991 PTCH1Q13635 1447 aa21.99■■□□□ 1.11
SCARNA20.5-201ENST00000516991 VGFO15240 615 aaPredicted RBP21.99■■□□□ 1.11
SCARNA20.5-201ENST00000516991 MEX3CQ5U5Q3 659 aaKnown RBP21.99■■□□□ 1.11
SCARNA20.5-201ENST00000516991 SETD1AO15047 1707 aaKnown RBP21.99■■□□□ 1.11
SCARNA20.5-201ENST00000516991 SLC4A1APQ9BWU0 796 aaKnown RBP21.98■■□□□ 1.11
SCARNA20.5-201ENST00000516991 RPGRIP1LQ68CZ1 1315 aa21.98■■□□□ 1.11
SCARNA20.5-201ENST00000516991 PRAG1Q86YV5 1406 aa21.97■■□□□ 1.11
SCARNA20.5-201ENST00000516991 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
SCARNA20.5-201ENST00000516991 PPLO60437 1756 aa21.96■■□□□ 1.11
SCARNA20.5-201ENST00000516991 ZNF772Q68DY9 489 aaPredicted RBP21.95■■□□□ 1.1
SCARNA20.5-201ENST00000516991 C1orf167Q5SNV9 1468 aa21.9■■□□□ 1.1
SCARNA20.5-201ENST00000516991 LAMC1P11047 1609 aa21.89■■□□□ 1.09
SCARNA20.5-201ENST00000516991 LRRC59Q96AG4 307 aaKnown RBP21.89■■□□□ 1.09
SCARNA20.5-201ENST00000516991 ROBO2Q9HCK4 1378 aa21.88■■□□□ 1.09
SCARNA20.5-201ENST00000516991 CCDC144AA2RUR9 1427 aa21.88■■□□□ 1.09
SCARNA20.5-201ENST00000516991 NUTM2BA6NNL0 878 aaPredicted RBP21.86■■□□□ 1.09
SCARNA20.5-201ENST00000516991 NUTM2EB1AL46 878 aaPredicted RBP21.86■■□□□ 1.09
SCARNA20.5-201ENST00000516991 NUTM2AQ8IVF1 878 aaPredicted RBP21.86■■□□□ 1.09
SCARNA20.5-201ENST00000516991 PNPLA6Q8IY17 1366 aa21.86■■□□□ 1.09
SCARNA20.5-201ENST00000516991 CDK12Q9NYV4 1490 aaPredicted RBP21.83■■□□□ 1.09
SCARNA20.5-201ENST00000516991 CDC42BPGQ6DT37 1551 aa21.83■■□□□ 1.09
SCARNA20.5-201ENST00000516991 ANKRD30BQ9BXX2 1392 aa21.83■■□□□ 1.08
SCARNA20.5-201ENST00000516991 IFT172Q9UG01 1749 aa21.83■■□□□ 1.08
SCARNA20.5-201ENST00000516991 ACIN1Q9UKV3 1341 aaKnown RBP21.82■■□□□ 1.08
SCARNA20.5-201ENST00000516991 AFF2P51816 1311 aa21.81■■□□□ 1.08
SCARNA20.5-201ENST00000516991 SPATA31E1Q6ZUB1 1445 aa21.81■■□□□ 1.08
SCARNA20.5-201ENST00000516991 RXRBP28702 533 aa21.8■■□□□ 1.08
SCARNA20.5-201ENST00000516991 FOXD1Q16676 465 aa21.8■■□□□ 1.08
SCARNA20.5-201ENST00000516991 DDX17Q92841 729 aaKnown RBP21.8■■□□□ 1.08
SCARNA20.5-201ENST00000516991 TECPR2O15040 1411 aa21.79■■□□□ 1.08
SCARNA20.5-201ENST00000516991 KNDC1Q76NI1 1749 aa21.78■■□□□ 1.08
SCARNA20.5-201ENST00000516991 MPHOSPH9Q99550 1183 aa21.78■■□□□ 1.08
SCARNA20.5-201ENST00000516991 SOS2Q07890 1332 aaPredicted RBP21.78■■□□□ 1.08
SCARNA20.5-201ENST00000516991 ADGRF5Q8IZF2 1346 aa21.77■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms