RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 NUTM2DQ5VT03 806 aaPredicted RBP7.81□□□□□ -1.16
SCARNA16.4-201ENST00000516956 TMEM2Q9UHN6 1383 aa7.81□□□□□ -1.16
SCARNA16.4-201ENST00000516956 NCKAP5LQ9HCH0 1330 aa7.8□□□□□ -1.16
SCARNA16.4-201ENST00000516956 SENP3Q9H4L4 574 aaPredicted RBP7.8□□□□□ -1.16
SCARNA16.4-201ENST00000516956 CLTCL1P53675 1640 aa7.8□□□□□ -1.16
SCARNA16.4-201ENST00000516956 ZNF142P52746 1687 aaPredicted RBP7.79□□□□□ -1.16
SCARNA16.4-201ENST00000516956 TIMELESSQ9UNS1 1208 aa7.79□□□□□ -1.16
SCARNA16.4-201ENST00000516956 LMTK3Q96Q04 1460 aa7.79□□□□□ -1.16
SCARNA16.4-201ENST00000516956 SCAF11Q99590 1463 aaKnown RBP7.78□□□□□ -1.16
SCARNA16.4-201ENST00000516956 KDM5AP29375 1690 aaKnown RBP7.78□□□□□ -1.16
SCARNA16.4-201ENST00000516956 UBR1Q8IWV7 1749 aa7.78□□□□□ -1.16
SCARNA16.4-201ENST00000516956 TMEM131LA2VDJ0 1609 aa7.78□□□□□ -1.16
SCARNA16.4-201ENST00000516956 LTKP29376 864 aa7.77□□□□□ -1.17
SCARNA16.4-201ENST00000516956 L3MBTL2Q969R5 705 aa7.77□□□□□ -1.17
SCARNA16.4-201ENST00000516956 NPHP4O75161 1426 aaPredicted RBP7.77□□□□□ -1.17
SCARNA16.4-201ENST00000516956 ZEB1P37275 1124 aaPredicted RBP7.76□□□□□ -1.17
SCARNA16.4-201ENST00000516956 SLC26A8Q96RN1 970 aa7.76□□□□□ -1.17
SCARNA16.4-201ENST00000516956 SLIT1O75093 1534 aa7.76□□□□□ -1.17
SCARNA16.4-201ENST00000516956 SPATA31E1Q6ZUB1 1445 aa7.76□□□□□ -1.17
SCARNA16.4-201ENST00000516956 PLEKHG1Q9ULL1 1385 aa7.75□□□□□ -1.17
SCARNA16.4-201ENST00000516956 NEURL4Q96JN8 1562 aa7.75□□□□□ -1.17
SCARNA16.4-201ENST00000516956 ARHGAP23Q9P227 1491 aa7.75□□□□□ -1.17
SCARNA16.4-201ENST00000516956 TBX22Q9Y458 520 aa7.74□□□□□ -1.17
SCARNA16.4-201ENST00000516956 ADGRF5Q8IZF2 1346 aa7.74□□□□□ -1.17
SCARNA16.4-201ENST00000516956 ZFYVE9O95405 1425 aa7.73□□□□□ -1.17
SCARNA16.4-201ENST00000516956 C14orf37Q86TY3 774 aa7.73□□□□□ -1.17
SCARNA16.4-201ENST00000516956 MYO5BQ9ULV0 1848 aa7.73□□□□□ -1.17
SCARNA16.4-201ENST00000516956 NEXMIFQ5QGS0 1516 aa7.73□□□□□ -1.17
SCARNA16.4-201ENST00000516956 POLR1AO95602 1720 aaPredicted RBP7.72□□□□□ -1.17
SCARNA16.4-201ENST00000516956 CFAP70Q5T0N1 1121 aa7.72□□□□□ -1.17
SCARNA16.4-201ENST00000516956 STK26Q9P289 416 aa7.72□□□□□ -1.17
SCARNA16.4-201ENST00000516956 MYOM2P54296 1465 aa7.72□□□□□ -1.17
SCARNA16.4-201ENST00000516956 IQGAP1P46940 1657 aa7.71□□□□□ -1.18
SCARNA16.4-201ENST00000516956 MED14O60244 1454 aa7.71□□□□□ -1.18
SCARNA16.4-201ENST00000516956 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.18
SCARNA16.4-201ENST00000516956 C14orf93Q9H972 538 aaKnown RBP7.71□□□□□ -1.18
SCARNA16.4-201ENST00000516956 POGKQ9P215 609 aa7.71□□□□□ -1.18
SCARNA16.4-201ENST00000516956 PPLO60437 1756 aa7.71□□□□□ -1.18
SCARNA16.4-201ENST00000516956 KCNA6P17658 529 aa7.7□□□□□ -1.18
SCARNA16.4-201ENST00000516956 TMEM132EQ6IEE7 984 aa7.7□□□□□ -1.18
SCARNA16.4-201ENST00000516956 CARD11Q9BXL7 1154 aa7.7□□□□□ -1.18
SCARNA16.4-201ENST00000516956 AMOTL2Q9Y2J4 779 aa7.7□□□□□ -1.18
SCARNA16.4-201ENST00000516956 DIP2AQ14689 1571 aa7.7□□□□□ -1.18
SCARNA16.4-201ENST00000516956 ROCK2O75116 1388 aaKnown RBP7.7□□□□□ -1.18
SCARNA16.4-201ENST00000516956 PIK3R4Q99570 1358 aa7.7□□□□□ -1.18
SCARNA16.4-201ENST00000516956 PIK3C2GO75747 1445 aa7.69□□□□□ -1.18
SCARNA16.4-201ENST00000516956 PRAG1Q86YV5 1406 aa7.69□□□□□ -1.18
SCARNA16.4-201ENST00000516956 SETBP1Q9Y6X0 1596 aa7.68□□□□□ -1.18
SCARNA16.4-201ENST00000516956 LAMC1P11047 1609 aa7.68□□□□□ -1.18
SCARNA16.4-201ENST00000516956 TRAK1Q9UPV9 953 aa7.68□□□□□ -1.18
SCARNA16.4-201ENST00000516956 STRCQ7RTU9 1775 aa7.68□□□□□ -1.18
SCARNA16.4-201ENST00000516956 EIF3AQ14152 1382 aaKnown RBP7.68□□□□□ -1.18
SCARNA16.4-201ENST00000516956 ALKQ9UM73 1620 aa7.67□□□□□ -1.18
SCARNA16.4-201ENST00000516956 IFT172Q9UG01 1749 aa7.67□□□□□ -1.18
SCARNA16.4-201ENST00000516956 ZNF335Q9H4Z2 1342 aaPredicted RBP7.67□□□□□ -1.18
SCARNA16.4-201ENST00000516956 ADAMTS13Q76LX8 1427 aa7.67□□□□□ -1.18
SCARNA16.4-201ENST00000516956 SLC24A1O60721 1099 aa7.66□□□□□ -1.18
SCARNA16.4-201ENST00000516956 NBPF1Q3BBV0 1214 aa7.66□□□□□ -1.18
SCARNA16.4-201ENST00000516956 NBPF8Q3BBV2 869 aa7.66□□□□□ -1.18
SCARNA16.4-201ENST00000516956 METP08581 1390 aa7.66□□□□□ -1.18
SCARNA16.4-201ENST00000516956 LRPPRCP42704 1394 aaKnown RBP7.66□□□□□ -1.18
SCARNA16.4-201ENST00000516956 YTHDC2Q9H6S0 1430 aaKnown RBP7.66□□□□□ -1.18
SCARNA16.4-201ENST00000516956 NRXN1Q9ULB1 1477 aa7.66□□□□□ -1.18
SCARNA16.4-201ENST00000516956 ATF3P18847 181 aa7.65□□□□□ -1.18
SCARNA16.4-201ENST00000516956 SAFB2Q14151 953 aaKnown RBP eCLIP7.65□□□□□ -1.18
SCARNA16.4-201ENST00000516956 PRAM1Q96QH2 718 aa7.65□□□□□ -1.18
SCARNA16.4-201ENST00000516956 CPS1P31327 1500 aa7.64□□□□□ -1.19
SCARNA16.4-201ENST00000516956 MSH6P52701 1360 aa7.64□□□□□ -1.19
SCARNA16.4-201ENST00000516956 ABCC11Q96J66 1382 aa7.64□□□□□ -1.19
SCARNA16.4-201ENST00000516956 CENPJQ9HC77 1338 aaPredicted RBP7.64□□□□□ -1.19
SCARNA16.4-201ENST00000516956 EIF4G2P78344 907 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCARNA16.4-201ENST00000516956 SIRT1Q96EB6 747 aa7.64□□□□□ -1.19
SCARNA16.4-201ENST00000516956 KIAA1210Q9ULL0 1709 aa7.64□□□□□ -1.19
SCARNA16.4-201ENST00000516956 NKTRP30414 1462 aaKnown RBP7.63□□□□□ -1.19
SCARNA16.4-201ENST00000516956 RALGAPBQ86X10 1494 aa7.63□□□□□ -1.19
SCARNA16.4-201ENST00000516956 SCAF1Q9H7N4 1312 aaKnown RBP7.63□□□□□ -1.19
SCARNA16.4-201ENST00000516956 WAPLQ7Z5K2 1190 aa7.63□□□□□ -1.19
SCARNA16.4-201ENST00000516956 TMEM94Q12767 1356 aa7.62□□□□□ -1.19
SCARNA16.4-201ENST00000516956 MINK1Q8N4C8 1332 aaPredicted RBP7.62□□□□□ -1.19
SCARNA16.4-201ENST00000516956 TOM1O60784 492 aa7.62□□□□□ -1.19
SCARNA16.4-201ENST00000516956 CADPS2Q86UW7 1296 aa7.62□□□□□ -1.19
SCARNA16.4-201ENST00000516956 CERKQ8TCT0 537 aa7.62□□□□□ -1.19
SCARNA16.4-201ENST00000516956 RBM33Q96EV2 1170 aaKnown RBP7.62□□□□□ -1.19
SCARNA16.4-201ENST00000516956 C19orf44Q9H6X5 657 aa7.62□□□□□ -1.19
SCARNA16.4-201ENST00000516956 TRPM1Q7Z4N2 1603 aa7.62□□□□□ -1.19
SCARNA16.4-201ENST00000516956 NRXN3Q9Y4C0 1643 aa7.62□□□□□ -1.19
SCARNA16.4-201ENST00000516956 PTCH1Q13635 1447 aa7.61□□□□□ -1.19
SCARNA16.4-201ENST00000516956 FAM135BQ49AJ0 1406 aa7.61□□□□□ -1.19
SCARNA16.4-201ENST00000516956 PTPRUQ92729 1446 aa7.61□□□□□ -1.19
SCARNA16.4-201ENST00000516956 UBAP1LF5GYI3 381 aa7.61□□□□□ -1.19
SCARNA16.4-201ENST00000516956 SRPK2P78362 688 aaKnown RBP7.61□□□□□ -1.19
SCARNA16.4-201ENST00000516956 CDCA8Q53HL2 280 aa7.61□□□□□ -1.19
SCARNA16.4-201ENST00000516956 CHD2O14647 1828 aaKnown RBP7.61□□□□□ -1.19
SCARNA16.4-201ENST00000516956 NCOA3Q9Y6Q9 1424 aa7.61□□□□□ -1.19
SCARNA16.4-201ENST00000516956 GPRASP1Q5JY77 1395 aa7.6□□□□□ -1.19
SCARNA16.4-201ENST00000516956 USP47Q96K76 1375 aa7.6□□□□□ -1.19
SCARNA16.4-201ENST00000516956 ROBO2Q9HCK4 1378 aa7.6□□□□□ -1.19
SCARNA16.4-201ENST00000516956 EVC2Q86UK5 1308 aa7.6□□□□□ -1.19
SCARNA16.4-201ENST00000516956 ST20-MTHFSA0A0A6YYL1 179 aa7.6□□□□□ -1.19
SCARNA16.4-201ENST00000516956 TMF1P82094 1093 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms