RNA–Protein interactions for RNA: ENST00000516549.1

RN7SKP135-201, Transcript of RNA, 7SK small nuclear pseudogene 135, humanhuman

BASIC

Gene RN7SKP135, Length 247 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP135-201ENST00000516549 IQGAP1P46940 1657 aa16.29■□□□□ 0.2
RN7SKP135-201ENST00000516549 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
RN7SKP135-201ENST00000516549 CERKQ8TCT0 537 aa16.28■□□□□ 0.2
RN7SKP135-201ENST00000516549 SCAF11Q99590 1463 aaKnown RBP16.28■□□□□ 0.2
RN7SKP135-201ENST00000516549 ARHGAP23Q9P227 1491 aa16.28■□□□□ 0.2
RN7SKP135-201ENST00000516549 SPHKAPQ2M3C7 1700 aa16.27■□□□□ 0.19
RN7SKP135-201ENST00000516549 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
RN7SKP135-201ENST00000516549 FBXO41Q8TF61 875 aa16.26■□□□□ 0.19
RN7SKP135-201ENST00000516549 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
RN7SKP135-201ENST00000516549 TXNDC2Q86VQ3 553 aa16.25■□□□□ 0.19
RN7SKP135-201ENST00000516549 LTBP4Q8N2S1 1624 aa16.24■□□□□ 0.19
RN7SKP135-201ENST00000516549 HDGFP51858 240 aaKnown RBP16.24■□□□□ 0.19
RN7SKP135-201ENST00000516549 IQSEC2Q5JU85 1478 aa16.23■□□□□ 0.19
RN7SKP135-201ENST00000516549 MYO5BQ9ULV0 1848 aa16.23■□□□□ 0.19
RN7SKP135-201ENST00000516549 TMEM131LA2VDJ0 1609 aa16.23■□□□□ 0.19
RN7SKP135-201ENST00000516549 ZNF335Q9H4Z2 1342 aaPredicted RBP16.21■□□□□ 0.19
RN7SKP135-201ENST00000516549 CPS1P31327 1500 aa16.21■□□□□ 0.19
RN7SKP135-201ENST00000516549 ILDR1Q86SU0 546 aaPredicted RBP16.21■□□□□ 0.19
RN7SKP135-201ENST00000516549 CHGAP10645 457 aaKnown RBP16.2■□□□□ 0.18
RN7SKP135-201ENST00000516549 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
RN7SKP135-201ENST00000516549 LTKP29376 864 aa16.19■□□□□ 0.18
RN7SKP135-201ENST00000516549 TRPM2O94759 1503 aa16.19■□□□□ 0.18
RN7SKP135-201ENST00000516549 SETD5Q9C0A6 1442 aa16.19■□□□□ 0.18
RN7SKP135-201ENST00000516549 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.18■□□□□ 0.18
RN7SKP135-201ENST00000516549 PPP1R15AO75807 674 aaPredicted RBP16.17■□□□□ 0.18
RN7SKP135-201ENST00000516549 RIMS2Q9UQ26 1411 aa16.17■□□□□ 0.18
RN7SKP135-201ENST00000516549 KIF1BO60333 1816 aa16.17■□□□□ 0.18
RN7SKP135-201ENST00000516549 ZFYVE9O95405 1425 aa16.15■□□□□ 0.18
RN7SKP135-201ENST00000516549 BCANQ96GW7 911 aa16.14■□□□□ 0.17
RN7SKP135-201ENST00000516549 CLTCL1P53675 1640 aa16.13■□□□□ 0.17
RN7SKP135-201ENST00000516549 PLEKHG1Q9ULL1 1385 aa16.13■□□□□ 0.17
RN7SKP135-201ENST00000516549 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
RN7SKP135-201ENST00000516549 RAB3GAP2Q9H2M9 1393 aa16.11■□□□□ 0.17
RN7SKP135-201ENST00000516549 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
RN7SKP135-201ENST00000516549 DIP2AQ14689 1571 aa16.09■□□□□ 0.17
RN7SKP135-201ENST00000516549 STRCP1A6NGW2 1772 aa16.09■□□□□ 0.17
RN7SKP135-201ENST00000516549 CCDC144AA2RUR9 1427 aa16.08■□□□□ 0.16
RN7SKP135-201ENST00000516549 HRCP23327 699 aa16.07■□□□□ 0.16
RN7SKP135-201ENST00000516549 SLC26A8Q96RN1 970 aa16.07■□□□□ 0.16
RN7SKP135-201ENST00000516549 LRRC7Q96NW7 1537 aa16.05■□□□□ 0.16
RN7SKP135-201ENST00000516549 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
RN7SKP135-201ENST00000516549 UBAP1LF5GYI3 381 aa16.05■□□□□ 0.16
RN7SKP135-201ENST00000516549 KCNA6P17658 529 aa16.05■□□□□ 0.16
RN7SKP135-201ENST00000516549 TBX22Q9Y458 520 aa16.05■□□□□ 0.16
RN7SKP135-201ENST00000516549 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
RN7SKP135-201ENST00000516549 NEXMIFQ5QGS0 1516 aa16.04■□□□□ 0.16
RN7SKP135-201ENST00000516549 RPGRIP1LQ68CZ1 1315 aa16.04■□□□□ 0.16
RN7SKP135-201ENST00000516549 CHD2O14647 1828 aaKnown RBP16.04■□□□□ 0.16
RN7SKP135-201ENST00000516549 TOM1O60784 492 aa16.04■□□□□ 0.16
RN7SKP135-201ENST00000516549 PIK3R4Q99570 1358 aa16.03■□□□□ 0.16
RN7SKP135-201ENST00000516549 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
RN7SKP135-201ENST00000516549 SETBP1Q9Y6X0 1596 aa16.03■□□□□ 0.16
RN7SKP135-201ENST00000516549 ADAMTS13Q76LX8 1427 aa16.02■□□□□ 0.15
RN7SKP135-201ENST00000516549 VGFO15240 615 aaPredicted RBP16.01■□□□□ 0.15
RN7SKP135-201ENST00000516549 PPLO60437 1756 aa16■□□□□ 0.15
RN7SKP135-201ENST00000516549 XIRP1Q702N8 1843 aaKnown RBP15.99■□□□□ 0.15
RN7SKP135-201ENST00000516549 PROSER2Q86WR7 435 aaPredicted RBP15.99■□□□□ 0.15
RN7SKP135-201ENST00000516549 NRXN3Q9Y4C0 1643 aa15.98■□□□□ 0.15
RN7SKP135-201ENST00000516549 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
RN7SKP135-201ENST00000516549 ANKRD30BQ9BXX2 1392 aa15.96■□□□□ 0.15
RN7SKP135-201ENST00000516549 SPATA31E1Q6ZUB1 1445 aa15.95■□□□□ 0.14
RN7SKP135-201ENST00000516549 IFT172Q9UG01 1749 aa15.95■□□□□ 0.14
RN7SKP135-201ENST00000516549 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
RN7SKP135-201ENST00000516549 MSH6P52701 1360 aa15.94■□□□□ 0.14
RN7SKP135-201ENST00000516549 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
RN7SKP135-201ENST00000516549 PIP4K2BP78356 416 aa15.93■□□□□ 0.14
RN7SKP135-201ENST00000516549 RGL3Q3MIN7 710 aa15.93■□□□□ 0.14
RN7SKP135-201ENST00000516549 XRN1Q8IZH2 1706 aaKnown RBP15.92■□□□□ 0.14
RN7SKP135-201ENST00000516549 AMOTL2Q9Y2J4 779 aa15.92■□□□□ 0.14
RN7SKP135-201ENST00000516549 ALKQ9UM73 1620 aa15.9■□□□□ 0.14
RN7SKP135-201ENST00000516549 C14orf37Q86TY3 774 aa15.9■□□□□ 0.14
RN7SKP135-201ENST00000516549 SETD1AO15047 1707 aaKnown RBP15.9■□□□□ 0.14
RN7SKP135-201ENST00000516549 METP08581 1390 aa15.88■□□□□ 0.13
RN7SKP135-201ENST00000516549 PTPRUQ92729 1446 aa15.88■□□□□ 0.13
RN7SKP135-201ENST00000516549 ABCB7O75027 752 aa15.88■□□□□ 0.13
RN7SKP135-201ENST00000516549 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
RN7SKP135-201ENST00000516549 MYOM2P54296 1465 aa15.87■□□□□ 0.13
RN7SKP135-201ENST00000516549 LAMC1P11047 1609 aa15.86■□□□□ 0.13
RN7SKP135-201ENST00000516549 RBM33Q96EV2 1170 aaKnown RBP15.86■□□□□ 0.13
RN7SKP135-201ENST00000516549 ADGRF5Q8IZF2 1346 aa15.86■□□□□ 0.13
RN7SKP135-201ENST00000516549 TRIM26Q12899 539 aaPredicted RBP15.85■□□□□ 0.13
RN7SKP135-201ENST00000516549 CADPS2Q86UW7 1296 aa15.85■□□□□ 0.13
RN7SKP135-201ENST00000516549 STAC3Q96MF2 364 aa15.85■□□□□ 0.13
RN7SKP135-201ENST00000516549 C19orf44Q9H6X5 657 aa15.85■□□□□ 0.13
RN7SKP135-201ENST00000516549 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.85■□□□□ 0.13
RN7SKP135-201ENST00000516549 PIK3C2GO75747 1445 aa15.85■□□□□ 0.13
RN7SKP135-201ENST00000516549 PTCH1Q13635 1447 aa15.85■□□□□ 0.13
RN7SKP135-201ENST00000516549 PRAG1Q86YV5 1406 aa15.85■□□□□ 0.13
RN7SKP135-201ENST00000516549 ATF3P18847 181 aa15.84■□□□□ 0.13
RN7SKP135-201ENST00000516549 DCCP43146 1447 aa15.84■□□□□ 0.13
RN7SKP135-201ENST00000516549 FAM135BQ49AJ0 1406 aa15.84■□□□□ 0.13
RN7SKP135-201ENST00000516549 HSPA1LP34931 641 aa15.82■□□□□ 0.12
RN7SKP135-201ENST00000516549 NRXN1Q9ULB1 1477 aa15.82■□□□□ 0.12
RN7SKP135-201ENST00000516549 SLAIN2Q9P270 581 aa15.81■□□□□ 0.12
RN7SKP135-201ENST00000516549 ROBO1Q9Y6N7 1651 aa15.81■□□□□ 0.12
RN7SKP135-201ENST00000516549 KNDC1Q76NI1 1749 aa15.8■□□□□ 0.12
RN7SKP135-201ENST00000516549 ADGRL3Q9HAR2 1447 aa15.8■□□□□ 0.12
RN7SKP135-201ENST00000516549 NALCNQ8IZF0 1738 aa15.79■□□□□ 0.12
RN7SKP135-201ENST00000516549 LRPPRCP42704 1394 aaKnown RBP15.78■□□□□ 0.12
RN7SKP135-201ENST00000516549 DCAF11Q8TEB1 546 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms