RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 HDGFP51858 240 aaKnown RBP13.66□□□□□ -0.22
SNORA48.9-201ENST00000516419 SULF1Q8IWU6 871 aa13.66□□□□□ -0.22
SNORA48.9-201ENST00000516419 PLEKHG3A1L390 1219 aa13.65□□□□□ -0.22
SNORA48.9-201ENST00000516419 HRO43593 1189 aa13.65□□□□□ -0.22
SNORA48.9-201ENST00000516419 MRPL50Q8N5N7 158 aaKnown RBP13.65□□□□□ -0.22
SNORA48.9-201ENST00000516419 SWT1Q5T5J6 900 aaKnown RBP13.63□□□□□ -0.23
SNORA48.9-201ENST00000516419 POTEGQ6S5H5 508 aa13.63□□□□□ -0.23
SNORA48.9-201ENST00000516419 BEGAINQ9BUH8 593 aa13.63□□□□□ -0.23
SNORA48.9-201ENST00000516419 STAC3Q96MF2 364 aa13.62□□□□□ -0.23
SNORA48.9-201ENST00000516419 KRTAP3-3Q9BYR6 98 aa13.62□□□□□ -0.23
SNORA48.9-201ENST00000516419 KRTAP3-2Q9BYR7 98 aa13.62□□□□□ -0.23
SNORA48.9-201ENST00000516419 DDX11L8A8MPP1 907 aa13.61□□□□□ -0.23
SNORA48.9-201ENST00000516419 POTEMA6NI47 508 aa13.6□□□□□ -0.23
SNORA48.9-201ENST00000516419 CD46P15529 392 aa13.6□□□□□ -0.23
SNORA48.9-201ENST00000516419 ZFRQ96KR1 1074 aaKnown RBP13.6□□□□□ -0.23
SNORA48.9-201ENST00000516419 SLC4A3P48751 1232 aa13.59□□□□□ -0.23
SNORA48.9-201ENST00000516419 RSPH4AQ5TD94 716 aa13.59□□□□□ -0.23
SNORA48.9-201ENST00000516419 SAMD7Q7Z3H4 446 aa13.58□□□□□ -0.24
SNORA48.9-201ENST00000516419 SLF2Q8IX21 1173 aa13.57□□□□□ -0.24
SNORA48.9-201ENST00000516419 CDAN1Q8IWY9 1227 aa13.56□□□□□ -0.24
SNORA48.9-201ENST00000516419 RDH13Q8NBN7 331 aa13.56□□□□□ -0.24
SNORA48.9-201ENST00000516419 RSPH6AQ9H0K4 717 aa13.56□□□□□ -0.24
SNORA48.9-201ENST00000516419 GOPCQ9HD26 462 aa13.56□□□□□ -0.24
SNORA48.9-201ENST00000516419 GOLGA8CPA6NN73 597 aa13.55□□□□□ -0.24
SNORA48.9-201ENST00000516419 DIXDC1Q155Q3 683 aa13.55□□□□□ -0.24
SNORA48.9-201ENST00000516419 SLC10A3P09131 477 aa13.52□□□□□ -0.25
SNORA48.9-201ENST00000516419 SH3D19Q5HYK7 790 aa13.52□□□□□ -0.25
SNORA48.9-201ENST00000516419 LRCH3Q96II8 777 aa13.52□□□□□ -0.25
SNORA48.9-201ENST00000516419 ANKK1Q8NFD2 765 aa13.51□□□□□ -0.25
SNORA48.9-201ENST00000516419 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.51□□□□□ -0.25
SNORA48.9-201ENST00000516419 GTF3C3Q9Y5Q9 886 aa13.51□□□□□ -0.25
SNORA48.9-201ENST00000516419 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
SNORA48.9-201ENST00000516419 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
SNORA48.9-201ENST00000516419 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
SNORA48.9-201ENST00000516419 RNF40O75150 1001 aa13.49□□□□□ -0.25
SNORA48.9-201ENST00000516419 GCGRP47871 477 aa13.49□□□□□ -0.25
SNORA48.9-201ENST00000516419 SPIRE2Q8WWL2 714 aa13.49□□□□□ -0.25
SNORA48.9-201ENST00000516419 SKIV2LQ15477 1246 aaKnown RBP13.48□□□□□ -0.25
SNORA48.9-201ENST00000516419 MYSM1Q5VVJ2 828 aa13.47□□□□□ -0.25
SNORA48.9-201ENST00000516419 WNT2BQ93097 391 aa13.47□□□□□ -0.25
SNORA48.9-201ENST00000516419 PCMTD1Q96MG8 357 aaPredicted RBP13.47□□□□□ -0.25
SNORA48.9-201ENST00000516419 SOWAHBA6NEL2 793 aa13.46□□□□□ -0.25
SNORA48.9-201ENST00000516419 KDM4AO75164 1064 aa13.45□□□□□ -0.26
SNORA48.9-201ENST00000516419 USP46P62068 366 aa13.44□□□□□ -0.26
SNORA48.9-201ENST00000516419 CFHP08603 1231 aa13.43□□□□□ -0.26
SNORA48.9-201ENST00000516419 CLK2P49760 499 aaKnown RBP13.42□□□□□ -0.26
SNORA48.9-201ENST00000516419 POLR3EQ9NVU0 708 aa13.42□□□□□ -0.26
SNORA48.9-201ENST00000516419 BCAMP50895 628 aa13.41□□□□□ -0.26
SNORA48.9-201ENST00000516419 PPP4CP60510 307 aa13.41□□□□□ -0.26
SNORA48.9-201ENST00000516419 KMT5BQ4FZB7 885 aa13.41□□□□□ -0.26
SNORA48.9-201ENST00000516419 HPS5Q9UPZ3 1129 aa13.41□□□□□ -0.26
SNORA48.9-201ENST00000516419 RIC3Q7Z5B4 369 aa13.4□□□□□ -0.26
SNORA48.9-201ENST00000516419 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
SNORA48.9-201ENST00000516419 TSR3Q9UJK0 312 aaKnown RBP13.4□□□□□ -0.26
SNORA48.9-201ENST00000516419 SPTLC1O15269 473 aa13.39□□□□□ -0.27
SNORA48.9-201ENST00000516419 GJA5P36382 358 aa13.39□□□□□ -0.27
SNORA48.9-201ENST00000516419 PRR14Q9BWN1 585 aa13.39□□□□□ -0.27
SNORA48.9-201ENST00000516419 MOXD2PA6NHM9 499 aa13.38□□□□□ -0.27
SNORA48.9-201ENST00000516419 ATP1B4Q9UN42 357 aaPredicted RBP13.38□□□□□ -0.27
SNORA48.9-201ENST00000516419 HOXA2O43364 376 aa13.37□□□□□ -0.27
SNORA48.9-201ENST00000516419 TUSC1Q2TAM9 212 aa13.37□□□□□ -0.27
SNORA48.9-201ENST00000516419 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
SNORA48.9-201ENST00000516419 RSBN1LQ6PCB5 846 aaPredicted RBP13.37□□□□□ -0.27
SNORA48.9-201ENST00000516419 PROCA1Q8NCQ7 364 aaPredicted RBP13.37□□□□□ -0.27
SNORA48.9-201ENST00000516419 LIMD1Q9UGP4 676 aa13.36□□□□□ -0.27
SNORA48.9-201ENST00000516419 ACTN4O43707 911 aaKnown RBP13.35□□□□□ -0.27
SNORA48.9-201ENST00000516419 NDUFV2P19404 249 aa13.35□□□□□ -0.27
SNORA48.9-201ENST00000516419 FUT2Q10981 343 aa13.35□□□□□ -0.27
SNORA48.9-201ENST00000516419 THSD4Q6ZMP0 1018 aa13.35□□□□□ -0.27
SNORA48.9-201ENST00000516419 KCTD12Q96CX2 325 aaKnown RBP13.35□□□□□ -0.27
SNORA48.9-201ENST00000516419 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNORA48.9-201ENST00000516419 ATP6V1AP38606 617 aa13.34□□□□□ -0.27
SNORA48.9-201ENST00000516419 FDX1P10109 184 aa13.32□□□□□ -0.28
SNORA48.9-201ENST00000516419 WBP1LQ9NX94 342 aa13.31□□□□□ -0.28
SNORA48.9-201ENST00000516419 APLP1P51693 650 aa13.3□□□□□ -0.28
SNORA48.9-201ENST00000516419 MYT1LQ9UL68 1186 aa13.3□□□□□ -0.28
SNORA48.9-201ENST00000516419 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
SNORA48.9-201ENST00000516419 NYAP1Q6ZVC0 841 aa13.28□□□□□ -0.28
SNORA48.9-201ENST00000516419 HLA-CQ95604 372 aa13.28□□□□□ -0.28
SNORA48.9-201ENST00000516419 PCDHB15Q9Y5E8 787 aa13.28□□□□□ -0.28
SNORA48.9-201ENST00000516419 GUCA2AQ02747 115 aa13.27□□□□□ -0.29
SNORA48.9-201ENST00000516419 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.29
SNORA48.9-201ENST00000516419 PPP2R2DQ66LE6 453 aa13.27□□□□□ -0.29
SNORA48.9-201ENST00000516419 LILRB3O75022 631 aa13.26□□□□□ -0.29
SNORA48.9-201ENST00000516419 MORN1Q5T089 497 aa13.26□□□□□ -0.29
SNORA48.9-201ENST00000516419 PCDHGC3Q9UN70 934 aa13.26□□□□□ -0.29
SNORA48.9-201ENST00000516419 PUS10Q3MIT2 529 aaKnown RBP13.25□□□□□ -0.29
SNORA48.9-201ENST00000516419 ERICH6Q7L0X2 663 aa13.25□□□□□ -0.29
SNORA48.9-201ENST00000516419 ZBTB3Q9H5J0 574 aa13.25□□□□□ -0.29
SNORA48.9-201ENST00000516419 PCDHB3Q9Y5E6 796 aa13.24□□□□□ -0.29
SNORA48.9-201ENST00000516419 PTPN5P54829 565 aa13.23□□□□□ -0.29
SNORA48.9-201ENST00000516419 QPCTQ16769 361 aa13.23□□□□□ -0.29
SNORA48.9-201ENST00000516419 NUTM2BA6NNL0 878 aaPredicted RBP13.22□□□□□ -0.29
SNORA48.9-201ENST00000516419 NUTM2EB1AL46 878 aaPredicted RBP13.22□□□□□ -0.29
SNORA48.9-201ENST00000516419 RFC5P40937 340 aa13.22□□□□□ -0.29
SNORA48.9-201ENST00000516419 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
SNORA48.9-201ENST00000516419 NUTM2AQ8IVF1 878 aaPredicted RBP13.22□□□□□ -0.29
SNORA48.9-201ENST00000516419 SLC27A5Q9Y2P5 690 aa13.22□□□□□ -0.29
SNORA48.9-201ENST00000516419 HRCP23327 699 aa13.21□□□□□ -0.29
SNORA48.9-201ENST00000516419 Q3C1V9 767 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms