RNA–Protein interactions for RNA: ENST00000514951.5

SMN1-209, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2 BASIC

Gene SMN1, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-209ENST00000514951 IQSEC2Q5JU85 1478 aa28.09■■■□□ 2.09
SMN1-209ENST00000514951 ZFYVE9O95405 1425 aa28.08■■■□□ 2.09
SMN1-209ENST00000514951 SPATA31E1Q6ZUB1 1445 aa28.07■■■□□ 2.08
SMN1-209ENST00000514951 RIMS2Q9UQ26 1411 aa28.05■■■□□ 2.08
SMN1-209ENST00000514951 LTKP29376 864 aa28.05■■■□□ 2.08
SMN1-209ENST00000514951 SCAF11Q99590 1463 aaKnown RBP28.05■■■□□ 2.08
SMN1-209ENST00000514951 MED14O60244 1454 aa28.02■■■□□ 2.08
SMN1-209ENST00000514951 TXNDC2Q86VQ3 553 aa28.02■■■□□ 2.08
SMN1-209ENST00000514951 NPHP4O75161 1426 aaPredicted RBP28.02■■■□□ 2.08
SMN1-209ENST00000514951 NEXMIFQ5QGS0 1516 aa28.01■■■□□ 2.07
SMN1-209ENST00000514951 ZNF326Q5BKZ1 582 aaKnown RBP27.99■■■□□ 2.07
SMN1-209ENST00000514951 EID1Q9Y6B2 187 aa27.99■■■□□ 2.07
SMN1-209ENST00000514951 IQGAP1P46940 1657 aa27.99■■■□□ 2.07
SMN1-209ENST00000514951 PPLO60437 1756 aa27.98■■■□□ 2.07
SMN1-209ENST00000514951 UBAP1LF5GYI3 381 aa27.97■■■□□ 2.07
SMN1-209ENST00000514951 IFT172Q9UG01 1749 aa27.96■■■□□ 2.07
SMN1-209ENST00000514951 NUTM2DQ5VT03 806 aaPredicted RBP27.95■■■□□ 2.07
SMN1-209ENST00000514951 RGL3Q3MIN7 710 aa27.94■■■□□ 2.06
SMN1-209ENST00000514951 CPS1P31327 1500 aa27.94■■■□□ 2.06
SMN1-209ENST00000514951 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.93■■■□□ 2.06
SMN1-209ENST00000514951 RPGRIP1LQ68CZ1 1315 aa27.93■■■□□ 2.06
SMN1-209ENST00000514951 HDGFP51858 240 aaKnown RBP27.92■■■□□ 2.06
SMN1-209ENST00000514951 PLEKHG1Q9ULL1 1385 aa27.91■■■□□ 2.06
SMN1-209ENST00000514951 PPP1R15AO75807 674 aaPredicted RBP27.91■■■□□ 2.06
SMN1-209ENST00000514951 SIN3AQ96ST3 1273 aa27.91■■■□□ 2.06
SMN1-209ENST00000514951 SCAF1Q9H7N4 1312 aaKnown RBP27.87■■■□□ 2.05
SMN1-209ENST00000514951 NRXN3Q9Y4C0 1643 aa27.87■■■□□ 2.05
SMN1-209ENST00000514951 SENP3Q9H4L4 574 aaPredicted RBP27.85■■■□□ 2.05
SMN1-209ENST00000514951 SETBP1Q9Y6X0 1596 aa27.84■■■□□ 2.05
SMN1-209ENST00000514951 VGFO15240 615 aaPredicted RBP27.83■■■□□ 2.05
SMN1-209ENST00000514951 ADAMTS13Q76LX8 1427 aa27.83■■■□□ 2.05
SMN1-209ENST00000514951 NEUROD1Q13562 356 aa27.82■■■□□ 2.04
SMN1-209ENST00000514951 MYOM2P54296 1465 aa27.82■■■□□ 2.04
SMN1-209ENST00000514951 ADGRF5Q8IZF2 1346 aa27.81■■■□□ 2.04
SMN1-209ENST00000514951 PIP4K2BP78356 416 aa27.8■■■□□ 2.04
SMN1-209ENST00000514951 SLC26A8Q96RN1 970 aa27.8■■■□□ 2.04
SMN1-209ENST00000514951 BCANQ96GW7 911 aa27.79■■■□□ 2.04
SMN1-209ENST00000514951 STRCP1A6NGW2 1772 aa27.79■■■□□ 2.04
SMN1-209ENST00000514951 DIP2AQ14689 1571 aa27.79■■■□□ 2.04
SMN1-209ENST00000514951 DISP3Q9P2K9 1392 aa27.79■■■□□ 2.04
SMN1-209ENST00000514951 NRXN1Q9ULB1 1477 aa27.78■■■□□ 2.04
SMN1-209ENST00000514951 TOM1O60784 492 aa27.78■■■□□ 2.04
SMN1-209ENST00000514951 CLSPNQ9HAW4 1339 aa27.77■■■□□ 2.04
SMN1-209ENST00000514951 DCAF11Q8TEB1 546 aa27.76■■■□□ 2.03
SMN1-209ENST00000514951 SETD1AO15047 1707 aaKnown RBP27.76■■■□□ 2.03
SMN1-209ENST00000514951 CCER1Q8TC90 406 aaPredicted RBP27.75■■■□□ 2.03
SMN1-209ENST00000514951 PIK3C2GO75747 1445 aa27.75■■■□□ 2.03
SMN1-209ENST00000514951 TBX22Q9Y458 520 aa27.74■■■□□ 2.03
SMN1-209ENST00000514951 ALKQ9UM73 1620 aa27.72■■■□□ 2.03
SMN1-209ENST00000514951 L3MBTL2Q969R5 705 aa27.72■■■□□ 2.03
SMN1-209ENST00000514951 LRRC7Q96NW7 1537 aa27.72■■■□□ 2.03
SMN1-209ENST00000514951 KDM2AQ9Y2K7 1162 aa27.71■■■□□ 2.03
SMN1-209ENST00000514951 CHD2O14647 1828 aaKnown RBP27.7■■■□□ 2.02
SMN1-209ENST00000514951 STAC3Q96MF2 364 aa27.69■■■□□ 2.02
SMN1-209ENST00000514951 METP08581 1390 aa27.67■■■□□ 2.02
SMN1-209ENST00000514951 NWD1Q149M9 1564 aa27.67■■■□□ 2.02
SMN1-209ENST00000514951 PIK3R4Q99570 1358 aa27.65■■■□□ 2.02
SMN1-209ENST00000514951 LAMC1P11047 1609 aa27.65■■■□□ 2.02
SMN1-209ENST00000514951 TONSLQ96HA7 1378 aa27.64■■■□□ 2.02
SMN1-209ENST00000514951 PTPRUQ92729 1446 aa27.64■■■□□ 2.01
SMN1-209ENST00000514951 HSPA1LP34931 641 aa27.64■■■□□ 2.01
SMN1-209ENST00000514951 ASXL1Q8IXJ9 1541 aa27.64■■■□□ 2.01
SMN1-209ENST00000514951 PRAG1Q86YV5 1406 aa27.63■■■□□ 2.01
SMN1-209ENST00000514951 KCNA6P17658 529 aa27.63■■■□□ 2.01
SMN1-209ENST00000514951 C14orf93Q9H972 538 aaKnown RBP27.63■■■□□ 2.01
SMN1-209ENST00000514951 XRN1Q8IZH2 1706 aaKnown RBP27.62■■■□□ 2.01
SMN1-209ENST00000514951 CFAP70Q5T0N1 1121 aa27.61■■■□□ 2.01
SMN1-209ENST00000514951 NKTRP30414 1462 aaKnown RBP27.57■■■□□ 2
SMN1-209ENST00000514951 KIAA1210Q9ULL0 1709 aa27.57■■■□□ 2
SMN1-209ENST00000514951 ADGRB1O14514 1584 aa27.56■■■□□ 2
SMN1-209ENST00000514951 AMOTL2Q9Y2J4 779 aa27.56■■■□□ 2
SMN1-209ENST00000514951 XIRP1Q702N8 1843 aaKnown RBP27.56■■■□□ 2
SMN1-209ENST00000514951 TMEM132EQ6IEE7 984 aa27.54■■■□□ 2
SMN1-209ENST00000514951 ILDR2Q71H61 639 aa27.52■■■□□ 2
SMN1-209ENST00000514951 TRPM1Q7Z4N2 1603 aa27.51■■□□□ 1.99
SMN1-209ENST00000514951 PROSER2Q86WR7 435 aaPredicted RBP27.51■■□□□ 1.99
SMN1-209ENST00000514951 TMEM94Q12767 1356 aa27.51■■□□□ 1.99
SMN1-209ENST00000514951 NBPF8Q3BBV2 869 aa27.5■■□□□ 1.99
SMN1-209ENST00000514951 TIMELESSQ9UNS1 1208 aa27.5■■□□□ 1.99
SMN1-209ENST00000514951 LRPPRCP42704 1394 aaKnown RBP27.5■■□□□ 1.99
SMN1-209ENST00000514951 YTHDC2Q9H6S0 1430 aaKnown RBP27.5■■□□□ 1.99
SMN1-209ENST00000514951 KNDC1Q76NI1 1749 aa27.5■■□□□ 1.99
SMN1-209ENST00000514951 RBM33Q96EV2 1170 aaKnown RBP27.49■■□□□ 1.99
SMN1-209ENST00000514951 TECPR2O15040 1411 aa27.47■■□□□ 1.99
SMN1-209ENST00000514951 PTCH1Q13635 1447 aa27.47■■□□□ 1.99
SMN1-209ENST00000514951 ABCC11Q96J66 1382 aa27.46■■□□□ 1.99
SMN1-209ENST00000514951 ROBO2Q9HCK4 1378 aa27.46■■□□□ 1.99
SMN1-209ENST00000514951 NBPF1Q3BBV0 1214 aa27.45■■□□□ 1.99
SMN1-209ENST00000514951 STK26Q9P289 416 aa27.44■■□□□ 1.98
SMN1-209ENST00000514951 MED1Q15648 1581 aaPredicted RBP27.44■■□□□ 1.98
SMN1-209ENST00000514951 DLC1Q96QB1 1528 aa27.39■■□□□ 1.98
SMN1-209ENST00000514951 RALGAPBQ86X10 1494 aa27.39■■□□□ 1.98
SMN1-209ENST00000514951 MSH6P52701 1360 aa27.38■■□□□ 1.97
SMN1-209ENST00000514951 NCOA3Q9Y6Q9 1424 aa27.38■■□□□ 1.97
SMN1-209ENST00000514951 ARHGEF28Q8N1W1 1705 aaKnown RBP27.37■■□□□ 1.97
SMN1-209ENST00000514951 FAM135BQ49AJ0 1406 aa27.36■■□□□ 1.97
SMN1-209ENST00000514951 ROCK2O75116 1388 aaKnown RBP27.36■■□□□ 1.97
SMN1-209ENST00000514951 GPRASP1Q5JY77 1395 aa27.36■■□□□ 1.97
SMN1-209ENST00000514951 PLEKHH1Q9ULM0 1364 aa27.36■■□□□ 1.97
SMN1-209ENST00000514951 NALCNQ8IZF0 1738 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms