RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
PDLIM5-220ENST00000514830 STAC3Q96MF2 364 aa17.37■□□□□ 0.37
PDLIM5-220ENST00000514830 ZFYVE9O95405 1425 aa17.35■□□□□ 0.37
PDLIM5-220ENST00000514830 MYOM2P54296 1465 aa17.35■□□□□ 0.37
PDLIM5-220ENST00000514830 THEMISQ8N1K5 641 aaPredicted RBP17.34■□□□□ 0.37
PDLIM5-220ENST00000514830 TMEM2Q9UHN6 1383 aa17.33■□□□□ 0.36
PDLIM5-220ENST00000514830 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
PDLIM5-220ENST00000514830 TONSLQ96HA7 1378 aa17.32■□□□□ 0.36
PDLIM5-220ENST00000514830 POLR1AO95602 1720 aaPredicted RBP17.32■□□□□ 0.36
PDLIM5-220ENST00000514830 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
PDLIM5-220ENST00000514830 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
PDLIM5-220ENST00000514830 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
PDLIM5-220ENST00000514830 DISP3Q9P2K9 1392 aa17.3■□□□□ 0.36
PDLIM5-220ENST00000514830 CHGAP10645 457 aaKnown RBP17.29■□□□□ 0.36
PDLIM5-220ENST00000514830 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
PDLIM5-220ENST00000514830 KIAA1210Q9ULL0 1709 aa17.28■□□□□ 0.36
PDLIM5-220ENST00000514830 HDGFP51858 240 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-220ENST00000514830 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.28■□□□□ 0.36
PDLIM5-220ENST00000514830 RGL3Q3MIN7 710 aa17.27■□□□□ 0.36
PDLIM5-220ENST00000514830 ZNF326Q5BKZ1 582 aaKnown RBP17.27■□□□□ 0.36
PDLIM5-220ENST00000514830 SCAF11Q99590 1463 aaKnown RBP17.26■□□□□ 0.35
PDLIM5-220ENST00000514830 LAMC1P11047 1609 aa17.26■□□□□ 0.35
PDLIM5-220ENST00000514830 VGFO15240 615 aaPredicted RBP17.26■□□□□ 0.35
PDLIM5-220ENST00000514830 SETBP1Q9Y6X0 1596 aa17.26■□□□□ 0.35
PDLIM5-220ENST00000514830 MED14O60244 1454 aa17.25■□□□□ 0.35
PDLIM5-220ENST00000514830 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
PDLIM5-220ENST00000514830 PIK3C2GO75747 1445 aa17.24■□□□□ 0.35
PDLIM5-220ENST00000514830 DCAF11Q8TEB1 546 aa17.24■□□□□ 0.35
PDLIM5-220ENST00000514830 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
PDLIM5-220ENST00000514830 PRAG1Q86YV5 1406 aa17.23■□□□□ 0.35
PDLIM5-220ENST00000514830 STRCQ7RTU9 1775 aa17.23■□□□□ 0.35
PDLIM5-220ENST00000514830 PPP1R15AO75807 674 aaPredicted RBP17.23■□□□□ 0.35
PDLIM5-220ENST00000514830 EID1Q9Y6B2 187 aa17.23■□□□□ 0.35
PDLIM5-220ENST00000514830 PLEKHG1Q9ULL1 1385 aa17.23■□□□□ 0.35
PDLIM5-220ENST00000514830 TRPM1Q7Z4N2 1603 aa17.22■□□□□ 0.35
PDLIM5-220ENST00000514830 SETD1AO15047 1707 aaKnown RBP17.22■□□□□ 0.35
PDLIM5-220ENST00000514830 SOCS7O14512 581 aa17.22■□□□□ 0.35
PDLIM5-220ENST00000514830 DIP2AQ14689 1571 aa17.22■□□□□ 0.35
PDLIM5-220ENST00000514830 IQGAP1P46940 1657 aa17.21■□□□□ 0.35
PDLIM5-220ENST00000514830 LTKP29376 864 aa17.21■□□□□ 0.35
PDLIM5-220ENST00000514830 ANKLE2Q86XL3 938 aa17.21■□□□□ 0.35
PDLIM5-220ENST00000514830 TXNDC2Q86VQ3 553 aa17.2■□□□□ 0.34
PDLIM5-220ENST00000514830 ADGRF5Q8IZF2 1346 aa17.2■□□□□ 0.34
PDLIM5-220ENST00000514830 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
PDLIM5-220ENST00000514830 RALGAPBQ86X10 1494 aa17.17■□□□□ 0.34
PDLIM5-220ENST00000514830 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
PDLIM5-220ENST00000514830 ADAMTS13Q76LX8 1427 aa17.16■□□□□ 0.34
PDLIM5-220ENST00000514830 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
PDLIM5-220ENST00000514830 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
PDLIM5-220ENST00000514830 IQSEC2Q5JU85 1478 aa17.15■□□□□ 0.34
PDLIM5-220ENST00000514830 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
PDLIM5-220ENST00000514830 ADGRB1O14514 1584 aa17.14■□□□□ 0.33
PDLIM5-220ENST00000514830 GPRASP1Q5JY77 1395 aa17.14■□□□□ 0.33
PDLIM5-220ENST00000514830 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-220ENST00000514830 TBX22Q9Y458 520 aa17.12■□□□□ 0.33
PDLIM5-220ENST00000514830 PIK3R4Q99570 1358 aa17.12■□□□□ 0.33
PDLIM5-220ENST00000514830 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
PDLIM5-220ENST00000514830 ILDR2Q71H61 639 aa17.11■□□□□ 0.33
PDLIM5-220ENST00000514830 CHD2O14647 1828 aaKnown RBP17.11■□□□□ 0.33
PDLIM5-220ENST00000514830 KNDC1Q76NI1 1749 aa17.1■□□□□ 0.33
PDLIM5-220ENST00000514830 NCKAP5LQ9HCH0 1330 aa17.1■□□□□ 0.33
PDLIM5-220ENST00000514830 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.32
PDLIM5-220ENST00000514830 XRN1Q8IZH2 1706 aaKnown RBP17.07■□□□□ 0.32
PDLIM5-220ENST00000514830 NWD1Q149M9 1564 aa17.07■□□□□ 0.32
PDLIM5-220ENST00000514830 UBAP1LF5GYI3 381 aa17.07■□□□□ 0.32
PDLIM5-220ENST00000514830 TECPR2O15040 1411 aa17.05■□□□□ 0.32
PDLIM5-220ENST00000514830 ROCK2O75116 1388 aaKnown RBP17.05■□□□□ 0.32
PDLIM5-220ENST00000514830 DLC1Q96QB1 1528 aa17.05■□□□□ 0.32
PDLIM5-220ENST00000514830 METP08581 1390 aa17.04■□□□□ 0.32
PDLIM5-220ENST00000514830 CPS1P31327 1500 aa17.04■□□□□ 0.32
PDLIM5-220ENST00000514830 ARHGEF28Q8N1W1 1705 aaKnown RBP17.04■□□□□ 0.32
PDLIM5-220ENST00000514830 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
PDLIM5-220ENST00000514830 LRPPRCP42704 1394 aaKnown RBP17.03■□□□□ 0.32
PDLIM5-220ENST00000514830 LTBP4Q8N2S1 1624 aa17.03■□□□□ 0.32
PDLIM5-220ENST00000514830 NBPF1Q3BBV0 1214 aa17.03■□□□□ 0.32
PDLIM5-220ENST00000514830 ABCC11Q96J66 1382 aa17.02■□□□□ 0.32
PDLIM5-220ENST00000514830 BCANQ96GW7 911 aa17.02■□□□□ 0.32
PDLIM5-220ENST00000514830 SLC26A8Q96RN1 970 aa17.02■□□□□ 0.32
PDLIM5-220ENST00000514830 SIRT1Q96EB6 747 aa17.01■□□□□ 0.31
PDLIM5-220ENST00000514830 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
PDLIM5-220ENST00000514830 PTPRUQ92729 1446 aa17.01■□□□□ 0.31
PDLIM5-220ENST00000514830 STRCP1A6NGW2 1772 aa17■□□□□ 0.31
PDLIM5-220ENST00000514830 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
PDLIM5-220ENST00000514830 FAM135BQ49AJ0 1406 aa16.99■□□□□ 0.31
PDLIM5-220ENST00000514830 CARD11Q9BXL7 1154 aa16.99■□□□□ 0.31
PDLIM5-220ENST00000514830 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
PDLIM5-220ENST00000514830 ZNF335Q9H4Z2 1342 aaPredicted RBP16.97■□□□□ 0.31
PDLIM5-220ENST00000514830 KCNA6P17658 529 aa16.97■□□□□ 0.31
PDLIM5-220ENST00000514830 EIF3AQ14152 1382 aaKnown RBP16.97■□□□□ 0.31
PDLIM5-220ENST00000514830 TOM1O60784 492 aa16.96■□□□□ 0.31
PDLIM5-220ENST00000514830 USP47Q96K76 1375 aa16.95■□□□□ 0.3
PDLIM5-220ENST00000514830 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
PDLIM5-220ENST00000514830 QRICH2Q9H0J4 1663 aa16.94■□□□□ 0.3
PDLIM5-220ENST00000514830 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
PDLIM5-220ENST00000514830 AMOTL2Q9Y2J4 779 aa16.94■□□□□ 0.3
PDLIM5-220ENST00000514830 NCOA3Q9Y6Q9 1424 aa16.93■□□□□ 0.3
PDLIM5-220ENST00000514830 ROBO2Q9HCK4 1378 aa16.91■□□□□ 0.3
PDLIM5-220ENST00000514830 ADGRB2O60241 1585 aa16.91■□□□□ 0.3
PDLIM5-220ENST00000514830 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
PDLIM5-220ENST00000514830 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms