RNA–Protein interactions for RNA: ENST00000514627.5

YIPF3-217, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-217ENST00000514627 PPP1R15AO75807 674 aaPredicted RBP19.12■□□□□ 0.65
YIPF3-217ENST00000514627 RIMS2Q9UQ26 1411 aa19.11■□□□□ 0.65
YIPF3-217ENST00000514627 NUP155O75694 1391 aa19.11■□□□□ 0.65
YIPF3-217ENST00000514627 ITGAEP38570 1179 aa19.11■□□□□ 0.65
YIPF3-217ENST00000514627 FAM135BQ49AJ0 1406 aa19.1■□□□□ 0.65
YIPF3-217ENST00000514627 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
YIPF3-217ENST00000514627 GCC2Q8IWJ2 1684 aa19.09■□□□□ 0.65
YIPF3-217ENST00000514627 TBX22Q9Y458 520 aa19.09■□□□□ 0.65
YIPF3-217ENST00000514627 NKTRP30414 1462 aaKnown RBP19.09■□□□□ 0.65
YIPF3-217ENST00000514627 CHGAP10645 457 aaKnown RBP19.08■□□□□ 0.64
YIPF3-217ENST00000514627 PPARGC1BQ86YN6 1023 aaKnown RBP19.07■□□□□ 0.64
YIPF3-217ENST00000514627 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
YIPF3-217ENST00000514627 IQGAP3Q86VI3 1631 aa19.07■□□□□ 0.64
YIPF3-217ENST00000514627 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
YIPF3-217ENST00000514627 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
YIPF3-217ENST00000514627 NWD1Q149M9 1564 aa19.05■□□□□ 0.64
YIPF3-217ENST00000514627 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
YIPF3-217ENST00000514627 E9PCH4 1651 aa19.04■□□□□ 0.64
YIPF3-217ENST00000514627 MSH6P52701 1360 aa19.04■□□□□ 0.64
YIPF3-217ENST00000514627 RBM33Q96EV2 1170 aaKnown RBP19.03■□□□□ 0.64
YIPF3-217ENST00000514627 NCOA3Q9Y6Q9 1424 aa19.02■□□□□ 0.64
YIPF3-217ENST00000514627 PIK3R4Q99570 1358 aa19.02■□□□□ 0.64
YIPF3-217ENST00000514627 SLAIN2Q9P270 581 aa19■□□□□ 0.63
YIPF3-217ENST00000514627 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
YIPF3-217ENST00000514627 ADAMTS13Q76LX8 1427 aa18.99■□□□□ 0.63
YIPF3-217ENST00000514627 NUTM2DQ5VT03 806 aaPredicted RBP18.98■□□□□ 0.63
YIPF3-217ENST00000514627 MYO5BQ9ULV0 1848 aa18.96■□□□□ 0.63
YIPF3-217ENST00000514627 DIP2AQ14689 1571 aa18.96■□□□□ 0.63
YIPF3-217ENST00000514627 CHD2O14647 1828 aaKnown RBP18.95■□□□□ 0.62
YIPF3-217ENST00000514627 C14orf37Q86TY3 774 aa18.94■□□□□ 0.62
YIPF3-217ENST00000514627 C19orf44Q9H6X5 657 aa18.94■□□□□ 0.62
YIPF3-217ENST00000514627 NAIPQ13075 1403 aa18.93■□□□□ 0.62
YIPF3-217ENST00000514627 CADPS2Q86UW7 1296 aa18.93■□□□□ 0.62
YIPF3-217ENST00000514627 AMOTL2Q9Y2J4 779 aa18.93■□□□□ 0.62
YIPF3-217ENST00000514627 ZNF326Q5BKZ1 582 aaKnown RBP18.92■□□□□ 0.62
YIPF3-217ENST00000514627 ROBO1Q9Y6N7 1651 aa18.92■□□□□ 0.62
YIPF3-217ENST00000514627 TRPM2O94759 1503 aa18.9■□□□□ 0.62
YIPF3-217ENST00000514627 ATF3P18847 181 aa18.9■□□□□ 0.62
YIPF3-217ENST00000514627 RGS17Q9UGC6 210 aaPredicted RBP18.89■□□□□ 0.61
YIPF3-217ENST00000514627 HFM1A2PYH4 1435 aa18.87■□□□□ 0.61
YIPF3-217ENST00000514627 SPHKAPQ2M3C7 1700 aa18.87■□□□□ 0.61
YIPF3-217ENST00000514627 PTPRUQ92729 1446 aa18.87■□□□□ 0.61
YIPF3-217ENST00000514627 JCADQ9P266 1359 aa18.87■□□□□ 0.61
YIPF3-217ENST00000514627 SETBP1Q9Y6X0 1596 aa18.86■□□□□ 0.61
YIPF3-217ENST00000514627 TRIM52Q96A61 297 aa18.86■□□□□ 0.61
YIPF3-217ENST00000514627 DCCP43146 1447 aa18.83■□□□□ 0.61
YIPF3-217ENST00000514627 SLC4A1APQ9BWU0 796 aaKnown RBP18.83■□□□□ 0.6
YIPF3-217ENST00000514627 METP08581 1390 aa18.82■□□□□ 0.6
YIPF3-217ENST00000514627 VGFO15240 615 aaPredicted RBP18.82■□□□□ 0.6
YIPF3-217ENST00000514627 RPGRIP1LQ68CZ1 1315 aa18.81■□□□□ 0.6
YIPF3-217ENST00000514627 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.8■□□□□ 0.6
YIPF3-217ENST00000514627 CLTCL1P53675 1640 aa18.8■□□□□ 0.6
YIPF3-217ENST00000514627 NRXN3Q9Y4C0 1643 aa18.8■□□□□ 0.6
YIPF3-217ENST00000514627 SPATA31A6Q5VVP1 1343 aa18.79■□□□□ 0.6
YIPF3-217ENST00000514627 BRINP3Q76B58 766 aa18.79■□□□□ 0.6
YIPF3-217ENST00000514627 PHLPP1O60346 1717 aa18.79■□□□□ 0.6
YIPF3-217ENST00000514627 NEXMIFQ5QGS0 1516 aa18.79■□□□□ 0.6
YIPF3-217ENST00000514627 POTEAQ6S8J7 498 aa18.78■□□□□ 0.6
YIPF3-217ENST00000514627 XRN1Q8IZH2 1706 aaKnown RBP18.77■□□□□ 0.6
YIPF3-217ENST00000514627 COL16A1Q07092 1604 aaPredicted RBP18.76■□□□□ 0.59
YIPF3-217ENST00000514627 AHDC1Q5TGY3 1603 aaPredicted RBP18.76■□□□□ 0.59
YIPF3-217ENST00000514627 MST1RQ04912 1400 aa18.74■□□□□ 0.59
YIPF3-217ENST00000514627 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
YIPF3-217ENST00000514627 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
YIPF3-217ENST00000514627 KIF1BO60333 1816 aa18.73■□□□□ 0.59
YIPF3-217ENST00000514627 PTCH1Q13635 1447 aa18.7■□□□□ 0.58
YIPF3-217ENST00000514627 MEX3CQ5U5Q3 659 aaKnown RBP18.7■□□□□ 0.58
YIPF3-217ENST00000514627 ZNF772Q68DY9 489 aaPredicted RBP18.7■□□□□ 0.58
YIPF3-217ENST00000514627 LRRC59Q96AG4 307 aaKnown RBP18.7■□□□□ 0.58
YIPF3-217ENST00000514627 PRAG1Q86YV5 1406 aa18.69■□□□□ 0.58
YIPF3-217ENST00000514627 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
YIPF3-217ENST00000514627 ASXL1Q8IXJ9 1541 aa18.69■□□□□ 0.58
YIPF3-217ENST00000514627 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
YIPF3-217ENST00000514627 CCDC144AA2RUR9 1427 aa18.67■□□□□ 0.58
YIPF3-217ENST00000514627 FOXD1Q16676 465 aa18.67■□□□□ 0.58
YIPF3-217ENST00000514627 LRP6O75581 1613 aa18.67■□□□□ 0.58
YIPF3-217ENST00000514627 SHPRHQ149N8 1683 aa18.66■□□□□ 0.58
YIPF3-217ENST00000514627 ROBO2Q9HCK4 1378 aa18.66■□□□□ 0.58
YIPF3-217ENST00000514627 ANKRD30BQ9BXX2 1392 aa18.64■□□□□ 0.57
YIPF3-217ENST00000514627 C1orf167Q5SNV9 1468 aa18.64■□□□□ 0.57
YIPF3-217ENST00000514627 NUTM2BA6NNL0 878 aaPredicted RBP18.62■□□□□ 0.57
YIPF3-217ENST00000514627 NUTM2EB1AL46 878 aaPredicted RBP18.62■□□□□ 0.57
YIPF3-217ENST00000514627 RGL3Q3MIN7 710 aa18.62■□□□□ 0.57
YIPF3-217ENST00000514627 NUTM2AQ8IVF1 878 aaPredicted RBP18.62■□□□□ 0.57
YIPF3-217ENST00000514627 SPATA31E1Q6ZUB1 1445 aa18.62■□□□□ 0.57
YIPF3-217ENST00000514627 ADGRF5Q8IZF2 1346 aa18.61■□□□□ 0.57
YIPF3-217ENST00000514627 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
YIPF3-217ENST00000514627 NALCNQ8IZF0 1738 aa18.6■□□□□ 0.57
YIPF3-217ENST00000514627 NHSL1Q5SYE7 1610 aa18.6■□□□□ 0.57
YIPF3-217ENST00000514627 PPLO60437 1756 aa18.6■□□□□ 0.57
YIPF3-217ENST00000514627 DDX17Q92841 729 aaKnown RBP18.59■□□□□ 0.57
YIPF3-217ENST00000514627 ORAI2Q96SN7 254 aa18.59■□□□□ 0.57
YIPF3-217ENST00000514627 PNPLA6Q8IY17 1366 aa18.58■□□□□ 0.57
YIPF3-217ENST00000514627 SOS2Q07890 1332 aaPredicted RBP18.58■□□□□ 0.57
YIPF3-217ENST00000514627 RXRBP28702 533 aa18.58■□□□□ 0.56
YIPF3-217ENST00000514627 LRPPRCP42704 1394 aaKnown RBP18.56■□□□□ 0.56
YIPF3-217ENST00000514627 ABCC11Q96J66 1382 aa18.56■□□□□ 0.56
YIPF3-217ENST00000514627 AFF2P51816 1311 aa18.56■□□□□ 0.56
YIPF3-217ENST00000514627 TECPR2O15040 1411 aa18.56■□□□□ 0.56
YIPF3-217ENST00000514627 LAMC1P11047 1609 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms