RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 TMEM131LA2VDJ0 1609 aa36.93■■■■□ 3.5
CCND3-221ENST00000514588 ITGAEP38570 1179 aa36.93■■■■□ 3.5
CCND3-221ENST00000514588 BCANQ96GW7 911 aa36.92■■■■□ 3.5
CCND3-221ENST00000514588 E9PCH4 1651 aa36.92■■■■□ 3.5
CCND3-221ENST00000514588 MYO5BQ9ULV0 1848 aa36.92■■■■□ 3.5
CCND3-221ENST00000514588 IQGAP3Q86VI3 1631 aa36.91■■■■□ 3.5
CCND3-221ENST00000514588 RIMS2Q9UQ26 1411 aa36.91■■■■□ 3.5
CCND3-221ENST00000514588 PROSER2Q86WR7 435 aaPredicted RBP36.9■■■■□ 3.5
CCND3-221ENST00000514588 PLEKHG1Q9ULL1 1385 aa36.9■■■■□ 3.5
CCND3-221ENST00000514588 NWD1Q149M9 1564 aa36.89■■■■□ 3.5
CCND3-221ENST00000514588 RBM33Q96EV2 1170 aaKnown RBP36.87■■■■□ 3.49
CCND3-221ENST00000514588 NUP155O75694 1391 aa36.87■■■■□ 3.49
CCND3-221ENST00000514588 NKTRP30414 1462 aaKnown RBP36.87■■■■□ 3.49
CCND3-221ENST00000514588 HDGFP51858 240 aaKnown RBP36.86■■■■□ 3.49
CCND3-221ENST00000514588 PPP1R15AO75807 674 aaPredicted RBP36.85■■■■□ 3.49
CCND3-221ENST00000514588 CHGAP10645 457 aaKnown RBP36.84■■■■□ 3.49
CCND3-221ENST00000514588 FAM135BQ49AJ0 1406 aa36.84■■■■□ 3.49
CCND3-221ENST00000514588 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.79■■■■□ 3.48
CCND3-221ENST00000514588 PHF23Q9BUL5 403 aaPredicted RBP36.79■■■■□ 3.48
CCND3-221ENST00000514588 TBX22Q9Y458 520 aa36.76■■■■□ 3.48
CCND3-221ENST00000514588 CHD2O14647 1828 aaKnown RBP36.74■■■■□ 3.47
CCND3-221ENST00000514588 NUTM2DQ5VT03 806 aaPredicted RBP36.74■■■■□ 3.47
CCND3-221ENST00000514588 MSH6P52701 1360 aa36.72■■■■□ 3.47
CCND3-221ENST00000514588 ADAMTS13Q76LX8 1427 aa36.71■■■■□ 3.47
CCND3-221ENST00000514588 ROBO1Q9Y6N7 1651 aa36.7■■■■□ 3.47
CCND3-221ENST00000514588 RRBP1Q9P2E9 1410 aaKnown RBP36.66■■■■□ 3.46
CCND3-221ENST00000514588 DIP2AQ14689 1571 aa36.65■■■■□ 3.46
CCND3-221ENST00000514588 SLAIN2Q9P270 581 aa36.63■■■■□ 3.45
CCND3-221ENST00000514588 PIK3R4Q99570 1358 aa36.61■■■■□ 3.45
CCND3-221ENST00000514588 NCOA3Q9Y6Q9 1424 aa36.59■■■■□ 3.45
CCND3-221ENST00000514588 SPHKAPQ2M3C7 1700 aa36.59■■■■□ 3.45
CCND3-221ENST00000514588 RGS17Q9UGC6 210 aaPredicted RBP36.56■■■■□ 3.44
CCND3-221ENST00000514588 NAIPQ13075 1403 aa36.55■■■■□ 3.44
CCND3-221ENST00000514588 TRPM2O94759 1503 aa36.54■■■■□ 3.44
CCND3-221ENST00000514588 C14orf37Q86TY3 774 aa36.52■■■■□ 3.44
CCND3-221ENST00000514588 PTPRUQ92729 1446 aa36.51■■■■□ 3.44
CCND3-221ENST00000514588 AMOTL2Q9Y2J4 779 aa36.51■■■■□ 3.44
CCND3-221ENST00000514588 NRXN3Q9Y4C0 1643 aa36.48■■■■□ 3.43
CCND3-221ENST00000514588 ZNF326Q5BKZ1 582 aaKnown RBP36.48■■■■□ 3.43
CCND3-221ENST00000514588 C19orf44Q9H6X5 657 aa36.48■■■■□ 3.43
CCND3-221ENST00000514588 SETBP1Q9Y6X0 1596 aa36.47■■■■□ 3.43
CCND3-221ENST00000514588 PHLPP1O60346 1717 aa36.46■■■■□ 3.43
CCND3-221ENST00000514588 CLTCL1P53675 1640 aa36.45■■■■□ 3.43
CCND3-221ENST00000514588 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.45■■■■□ 3.43
CCND3-221ENST00000514588 CADPS2Q86UW7 1296 aa36.44■■■■□ 3.42
CCND3-221ENST00000514588 ATF3P18847 181 aa36.42■■■■□ 3.42
CCND3-221ENST00000514588 JCADQ9P266 1359 aa36.4■■■■□ 3.42
CCND3-221ENST00000514588 HFM1A2PYH4 1435 aa36.4■■■■□ 3.42
CCND3-221ENST00000514588 XRN1Q8IZH2 1706 aaKnown RBP36.39■■■■□ 3.42
CCND3-221ENST00000514588 NEXMIFQ5QGS0 1516 aa36.39■■■■□ 3.42
CCND3-221ENST00000514588 COL16A1Q07092 1604 aaPredicted RBP36.38■■■■□ 3.41
CCND3-221ENST00000514588 METP08581 1390 aa36.38■■■■□ 3.41
CCND3-221ENST00000514588 TRIM52Q96A61 297 aa36.35■■■■□ 3.41
CCND3-221ENST00000514588 POTEAQ6S8J7 498 aa36.34■■■■□ 3.41
CCND3-221ENST00000514588 DCCP43146 1447 aa36.32■■■■□ 3.4
CCND3-221ENST00000514588 AHDC1Q5TGY3 1603 aaPredicted RBP36.31■■■■□ 3.4
CCND3-221ENST00000514588 KIF1BO60333 1816 aa36.3■■■■□ 3.4
CCND3-221ENST00000514588 BRINP3Q76B58 766 aa36.28■■■■□ 3.4
CCND3-221ENST00000514588 SLC4A1APQ9BWU0 796 aaKnown RBP36.27■■■■□ 3.4
CCND3-221ENST00000514588 SPATA31A6Q5VVP1 1343 aa36.22■■■■□ 3.39
CCND3-221ENST00000514588 MST1RQ04912 1400 aa36.22■■■■□ 3.39
CCND3-221ENST00000514588 LRP6O75581 1613 aa36.2■■■■□ 3.39
CCND3-221ENST00000514588 VGFO15240 615 aaPredicted RBP36.2■■■■□ 3.39
CCND3-221ENST00000514588 ADGRL3Q9HAR2 1447 aa36.19■■■■□ 3.38
CCND3-221ENST00000514588 ASXL1Q8IXJ9 1541 aa36.18■■■■□ 3.38
CCND3-221ENST00000514588 SHPRHQ149N8 1683 aa36.16■■■■□ 3.38
CCND3-221ENST00000514588 RPGRIP1LQ68CZ1 1315 aa36.16■■■■□ 3.38
CCND3-221ENST00000514588 SETD1AO15047 1707 aaKnown RBP36.13■■■■□ 3.37
CCND3-221ENST00000514588 NALCNQ8IZF0 1738 aa36.13■■■■□ 3.37
CCND3-221ENST00000514588 FOXD1Q16676 465 aa36.12■■■■□ 3.37
CCND3-221ENST00000514588 PTCH1Q13635 1447 aa36.1■■■■□ 3.37
CCND3-221ENST00000514588 MEX3CQ5U5Q3 659 aaKnown RBP36.1■■■■□ 3.37
CCND3-221ENST00000514588 ROBO2Q9HCK4 1378 aa36.09■■■■□ 3.37
CCND3-221ENST00000514588 NHSL1Q5SYE7 1610 aa36.08■■■■□ 3.37
CCND3-221ENST00000514588 SETD5Q9C0A6 1442 aa36.08■■■■□ 3.37
CCND3-221ENST00000514588 PPLO60437 1756 aa36.07■■■■□ 3.37
CCND3-221ENST00000514588 PRAG1Q86YV5 1406 aa36.05■■■■□ 3.36
CCND3-221ENST00000514588 DDX17Q92841 729 aaKnown RBP36.02■■■■□ 3.36
CCND3-221ENST00000514588 NUTM2BA6NNL0 878 aaPredicted RBP36.01■■■■□ 3.36
CCND3-221ENST00000514588 NUTM2EB1AL46 878 aaPredicted RBP36.01■■■■□ 3.36
CCND3-221ENST00000514588 ZNF772Q68DY9 489 aaPredicted RBP36.01■■■■□ 3.36
CCND3-221ENST00000514588 NUTM2AQ8IVF1 878 aaPredicted RBP36.01■■■■□ 3.36
CCND3-221ENST00000514588 CCDC144AA2RUR9 1427 aa36■■■■□ 3.35
CCND3-221ENST00000514588 C1orf167Q5SNV9 1468 aa36■■■■□ 3.35
CCND3-221ENST00000514588 LRRC59Q96AG4 307 aaKnown RBP36■■■■□ 3.35
CCND3-221ENST00000514588 MPHOSPH9Q99550 1183 aa36■■■■□ 3.35
CCND3-221ENST00000514588 ADGRF5Q8IZF2 1346 aa35.96■■■■□ 3.35
CCND3-221ENST00000514588 SPATA31E1Q6ZUB1 1445 aa35.96■■■■□ 3.35
CCND3-221ENST00000514588 RGL3Q3MIN7 710 aa35.93■■■■□ 3.34
CCND3-221ENST00000514588 PNPLA6Q8IY17 1366 aa35.92■■■■□ 3.34
CCND3-221ENST00000514588 ORAI2Q96SN7 254 aa35.91■■■■□ 3.34
CCND3-221ENST00000514588 LAMC1P11047 1609 aa35.89■■■■□ 3.34
CCND3-221ENST00000514588 ANKRD30BQ9BXX2 1392 aa35.89■■■■□ 3.34
CCND3-221ENST00000514588 IFT172Q9UG01 1749 aa35.86■■■■□ 3.33
CCND3-221ENST00000514588 AFF2P51816 1311 aa35.85■■■■□ 3.33
CCND3-221ENST00000514588 SOS2Q07890 1332 aaPredicted RBP35.83■■■■□ 3.33
CCND3-221ENST00000514588 RXRBP28702 533 aa35.82■■■■□ 3.32
CCND3-221ENST00000514588 STK26Q9P289 416 aa35.81■■■■□ 3.32
CCND3-221ENST00000514588 TECPR2O15040 1411 aa35.81■■■■□ 3.32
CCND3-221ENST00000514588 CDC42BPGQ6DT37 1551 aa35.81■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms