RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 NOS1P29475 1434 aa16.02■□□□□ 0.16
DDR1-276ENST00000514534 SLAIN2Q9P270 581 aa16.02■□□□□ 0.16
DDR1-276ENST00000514534 CHD2O14647 1828 aaKnown RBP16.02■□□□□ 0.16
DDR1-276ENST00000514534 ANKRD30AQ9BXX3 1397 aa16.01■□□□□ 0.15
DDR1-276ENST00000514534 HDGFP51858 240 aaKnown RBP16■□□□□ 0.15
DDR1-276ENST00000514534 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
DDR1-276ENST00000514534 APLP2Q06481 763 aa15.98■□□□□ 0.15
DDR1-276ENST00000514534 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
DDR1-276ENST00000514534 NCOA3Q9Y6Q9 1424 aa15.98■□□□□ 0.15
DDR1-276ENST00000514534 PLEKHG1Q9ULL1 1385 aa15.98■□□□□ 0.15
DDR1-276ENST00000514534 RPRD2Q5VT52 1461 aaKnown RBP15.97■□□□□ 0.15
DDR1-276ENST00000514534 SPATA31A6Q5VVP1 1343 aa15.97■□□□□ 0.15
DDR1-276ENST00000514534 MYO5BQ9ULV0 1848 aa15.97■□□□□ 0.15
DDR1-276ENST00000514534 ZNF772Q68DY9 489 aaPredicted RBP15.97■□□□□ 0.15
DDR1-276ENST00000514534 PPP1R15AO75807 674 aaPredicted RBP15.96■□□□□ 0.15
DDR1-276ENST00000514534 GCC2Q8IWJ2 1684 aa15.95■□□□□ 0.14
DDR1-276ENST00000514534 ZFYVE9O95405 1425 aa15.95■□□□□ 0.14
DDR1-276ENST00000514534 MEX3CQ5U5Q3 659 aaKnown RBP15.95■□□□□ 0.14
DDR1-276ENST00000514534 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
DDR1-276ENST00000514534 SHPRHQ149N8 1683 aa15.94■□□□□ 0.14
DDR1-276ENST00000514534 RIMS2Q9UQ26 1411 aa15.94■□□□□ 0.14
DDR1-276ENST00000514534 C14orf37Q86TY3 774 aa15.93■□□□□ 0.14
DDR1-276ENST00000514534 AHDC1Q5TGY3 1603 aaPredicted RBP15.93■□□□□ 0.14
DDR1-276ENST00000514534 CADPS2Q86UW7 1296 aa15.92■□□□□ 0.14
DDR1-276ENST00000514534 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.92■□□□□ 0.14
DDR1-276ENST00000514534 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
DDR1-276ENST00000514534 TMEM131LA2VDJ0 1609 aa15.92■□□□□ 0.14
DDR1-276ENST00000514534 LRP6O75581 1613 aa15.92■□□□□ 0.14
DDR1-276ENST00000514534 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
DDR1-276ENST00000514534 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.91■□□□□ 0.14
DDR1-276ENST00000514534 UPF1Q92900 1129 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDR1-276ENST00000514534 DIP2AQ14689 1571 aa15.91■□□□□ 0.14
DDR1-276ENST00000514534 ATF3P18847 181 aa15.9■□□□□ 0.14
DDR1-276ENST00000514534 TRIM52Q96A61 297 aa15.9■□□□□ 0.14
DDR1-276ENST00000514534 PIK3R4Q99570 1358 aa15.89■□□□□ 0.13
DDR1-276ENST00000514534 C19orf44Q9H6X5 657 aa15.89■□□□□ 0.13
DDR1-276ENST00000514534 ANKRD50Q9ULJ7 1429 aa15.88■□□□□ 0.13
DDR1-276ENST00000514534 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
DDR1-276ENST00000514534 CDK12Q9NYV4 1490 aaPredicted RBP15.87■□□□□ 0.13
DDR1-276ENST00000514534 RXRBP28702 533 aa15.87■□□□□ 0.13
DDR1-276ENST00000514534 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
DDR1-276ENST00000514534 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
DDR1-276ENST00000514534 TRPM2O94759 1503 aa15.85■□□□□ 0.13
DDR1-276ENST00000514534 DCCP43146 1447 aa15.83■□□□□ 0.12
DDR1-276ENST00000514534 UNC13BO14795 1591 aa15.83■□□□□ 0.12
DDR1-276ENST00000514534 E9PCH4 1651 aa15.82■□□□□ 0.12
DDR1-276ENST00000514534 NUTM2BA6NNL0 878 aaPredicted RBP15.81■□□□□ 0.12
DDR1-276ENST00000514534 NUTM2EB1AL46 878 aaPredicted RBP15.81■□□□□ 0.12
DDR1-276ENST00000514534 FAM50AQ14320 339 aaKnown RBP15.81■□□□□ 0.12
DDR1-276ENST00000514534 BRINP3Q76B58 766 aa15.81■□□□□ 0.12
DDR1-276ENST00000514534 NUTM2AQ8IVF1 878 aaPredicted RBP15.81■□□□□ 0.12
DDR1-276ENST00000514534 AMOTL2Q9Y2J4 779 aa15.81■□□□□ 0.12
DDR1-276ENST00000514534 NUTM2DQ5VT03 806 aaPredicted RBP15.8■□□□□ 0.12
DDR1-276ENST00000514534 NHSL1Q5SYE7 1610 aa15.79■□□□□ 0.12
DDR1-276ENST00000514534 SETD5Q9C0A6 1442 aa15.79■□□□□ 0.12
DDR1-276ENST00000514534 AFF2P51816 1311 aa15.79■□□□□ 0.12
DDR1-276ENST00000514534 ASXL1Q8IXJ9 1541 aa15.78■□□□□ 0.12
DDR1-276ENST00000514534 LRRC59Q96AG4 307 aaKnown RBP15.78■□□□□ 0.12
DDR1-276ENST00000514534 IQGAP3Q86VI3 1631 aa15.77■□□□□ 0.12
DDR1-276ENST00000514534 XRN1Q8IZH2 1706 aaKnown RBP15.77■□□□□ 0.11
DDR1-276ENST00000514534 PTPRUQ92729 1446 aa15.77■□□□□ 0.11
DDR1-276ENST00000514534 RBM6P78332 1123 aaKnown RBP15.75■□□□□ 0.11
DDR1-276ENST00000514534 MST1RQ04912 1400 aa15.75■□□□□ 0.11
DDR1-276ENST00000514534 SETBP1Q9Y6X0 1596 aa15.74■□□□□ 0.11
DDR1-276ENST00000514534 C8orf37Q96NL8 207 aa15.73■□□□□ 0.11
DDR1-276ENST00000514534 QTRT2Q9H974 415 aaKnown RBP15.73■□□□□ 0.11
DDR1-276ENST00000514534 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
DDR1-276ENST00000514534 RGS12O14924 1447 aa15.72■□□□□ 0.11
DDR1-276ENST00000514534 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
DDR1-276ENST00000514534 PNPLA6Q8IY17 1366 aa15.71■□□□□ 0.11
DDR1-276ENST00000514534 ADGRL3Q9HAR2 1447 aa15.7■□□□□ 0.1
DDR1-276ENST00000514534 NGLY1Q96IV0 654 aa15.7■□□□□ 0.1
DDR1-276ENST00000514534 SPHKAPQ2M3C7 1700 aa15.7■□□□□ 0.1
DDR1-276ENST00000514534 NUP155O75694 1391 aa15.69■□□□□ 0.1
DDR1-276ENST00000514534 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
DDR1-276ENST00000514534 NALCNQ8IZF0 1738 aa15.68■□□□□ 0.1
DDR1-276ENST00000514534 ATAD2Q6PL18 1390 aa15.67■□□□□ 0.1
DDR1-276ENST00000514534 METP08581 1390 aa15.66■□□□□ 0.1
DDR1-276ENST00000514534 LAMC1P11047 1609 aa15.65■□□□□ 0.1
DDR1-276ENST00000514534 DDX17Q92841 729 aaKnown RBP15.65■□□□□ 0.1
DDR1-276ENST00000514534 ADAMTS2O95450 1211 aa15.64■□□□□ 0.09
DDR1-276ENST00000514534 USP21Q9UK80 565 aa15.63■□□□□ 0.09
DDR1-276ENST00000514534 TRPC5Q9UL62 973 aaPredicted RBP15.63■□□□□ 0.09
DDR1-276ENST00000514534 C1orf167Q5SNV9 1468 aa15.63■□□□□ 0.09
DDR1-276ENST00000514534 PTCH1Q13635 1447 aa15.62■□□□□ 0.09
DDR1-276ENST00000514534 KIF1BO60333 1816 aa15.62■□□□□ 0.09
DDR1-276ENST00000514534 ZRANB1Q9UGI0 708 aa15.61■□□□□ 0.09
DDR1-276ENST00000514534 NEXMIFQ5QGS0 1516 aa15.61■□□□□ 0.09
DDR1-276ENST00000514534 SOS2Q07890 1332 aaPredicted RBP15.61■□□□□ 0.09
DDR1-276ENST00000514534 COL22A1Q8NFW1 1626 aaPredicted RBP15.59■□□□□ 0.09
DDR1-276ENST00000514534 CLTCL1P53675 1640 aa15.58■□□□□ 0.09
DDR1-276ENST00000514534 CCDC125Q86Z20 511 aa15.58■□□□□ 0.08
DDR1-276ENST00000514534 FNBP4Q8N3X1 1017 aaPredicted RBP15.58■□□□□ 0.08
DDR1-276ENST00000514534 ATRNO75882 1429 aa15.57■□□□□ 0.08
DDR1-276ENST00000514534 MARF1Q9Y4F3 1742 aaKnown RBP15.57■□□□□ 0.08
DDR1-276ENST00000514534 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
DDR1-276ENST00000514534 ITGAEP38570 1179 aa15.55■□□□□ 0.08
DDR1-276ENST00000514534 ORAI2Q96SN7 254 aa15.55■□□□□ 0.08
DDR1-276ENST00000514534 HFM1A2PYH4 1435 aa15.54■□□□□ 0.08
DDR1-276ENST00000514534 PRAG1Q86YV5 1406 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms