RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 RIMS2Q9UQ26 1411 aa19.65■□□□□ 0.74
DDR1-275ENST00000514434 TOM1O60784 492 aa19.64■□□□□ 0.73
DDR1-275ENST00000514434 HFM1A2PYH4 1435 aa19.64■□□□□ 0.73
DDR1-275ENST00000514434 TMEM131LA2VDJ0 1609 aa19.64■□□□□ 0.73
DDR1-275ENST00000514434 HDGFP51858 240 aaKnown RBP19.63■□□□□ 0.73
DDR1-275ENST00000514434 LRRC7Q96NW7 1537 aa19.62■□□□□ 0.73
DDR1-275ENST00000514434 ZFYVE9O95405 1425 aa19.61■□□□□ 0.73
DDR1-275ENST00000514434 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.59■□□□□ 0.73
DDR1-275ENST00000514434 KCNA6P17658 529 aa19.58■□□□□ 0.72
DDR1-275ENST00000514434 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
DDR1-275ENST00000514434 RBM33Q96EV2 1170 aaKnown RBP19.58■□□□□ 0.72
DDR1-275ENST00000514434 SLC4A1APQ9BWU0 796 aaKnown RBP19.58■□□□□ 0.72
DDR1-275ENST00000514434 SPHKAPQ2M3C7 1700 aa19.58■□□□□ 0.72
DDR1-275ENST00000514434 PLEKHG1Q9ULL1 1385 aa19.57■□□□□ 0.72
DDR1-275ENST00000514434 PROSER2Q86WR7 435 aaPredicted RBP19.56■□□□□ 0.72
DDR1-275ENST00000514434 HSPA1LP34931 641 aa19.54■□□□□ 0.72
DDR1-275ENST00000514434 FOXD1Q16676 465 aa19.53■□□□□ 0.72
DDR1-275ENST00000514434 TMEM94Q12767 1356 aa19.53■□□□□ 0.72
DDR1-275ENST00000514434 CLTCL1P53675 1640 aa19.51■□□□□ 0.71
DDR1-275ENST00000514434 TBX22Q9Y458 520 aa19.51■□□□□ 0.71
DDR1-275ENST00000514434 ALKQ9UM73 1620 aa19.51■□□□□ 0.71
DDR1-275ENST00000514434 XIRP1Q702N8 1843 aaKnown RBP19.5■□□□□ 0.71
DDR1-275ENST00000514434 TRPM2O94759 1503 aa19.5■□□□□ 0.71
DDR1-275ENST00000514434 DISP3Q9P2K9 1392 aa19.49■□□□□ 0.71
DDR1-275ENST00000514434 ADAMTS13Q76LX8 1427 aa19.49■□□□□ 0.71
DDR1-275ENST00000514434 MPHOSPH9Q99550 1183 aa19.46■□□□□ 0.71
DDR1-275ENST00000514434 NWD1Q149M9 1564 aa19.45■□□□□ 0.7
DDR1-275ENST00000514434 NKTRP30414 1462 aaKnown RBP19.45■□□□□ 0.7
DDR1-275ENST00000514434 CHD2O14647 1828 aaKnown RBP19.44■□□□□ 0.7
DDR1-275ENST00000514434 KIF1BO60333 1816 aa19.44■□□□□ 0.7
DDR1-275ENST00000514434 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
DDR1-275ENST00000514434 C14orf37Q86TY3 774 aa19.44■□□□□ 0.7
DDR1-275ENST00000514434 AMOTL2Q9Y2J4 779 aa19.42■□□□□ 0.7
DDR1-275ENST00000514434 DIP2AQ14689 1571 aa19.41■□□□□ 0.7
DDR1-275ENST00000514434 MSH6P52701 1360 aa19.41■□□□□ 0.7
DDR1-275ENST00000514434 NEXMIFQ5QGS0 1516 aa19.41■□□□□ 0.7
DDR1-275ENST00000514434 PIK3R4Q99570 1358 aa19.39■□□□□ 0.69
DDR1-275ENST00000514434 PTPRUQ92729 1446 aa19.39■□□□□ 0.69
DDR1-275ENST00000514434 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
DDR1-275ENST00000514434 NRXN3Q9Y4C0 1643 aa19.38■□□□□ 0.69
DDR1-275ENST00000514434 SETBP1Q9Y6X0 1596 aa19.37■□□□□ 0.69
DDR1-275ENST00000514434 CCDC144AA2RUR9 1427 aa19.37■□□□□ 0.69
DDR1-275ENST00000514434 METP08581 1390 aa19.37■□□□□ 0.69
DDR1-275ENST00000514434 RGL3Q3MIN7 710 aa19.37■□□□□ 0.69
DDR1-275ENST00000514434 VGFO15240 615 aaPredicted RBP19.36■□□□□ 0.69
DDR1-275ENST00000514434 RPGRIP1LQ68CZ1 1315 aa19.35■□□□□ 0.69
DDR1-275ENST00000514434 SLAIN2Q9P270 581 aa19.35■□□□□ 0.69
DDR1-275ENST00000514434 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
DDR1-275ENST00000514434 ACIN1Q9UKV3 1341 aaKnown RBP19.32■□□□□ 0.68
DDR1-275ENST00000514434 ATF3P18847 181 aa19.32■□□□□ 0.68
DDR1-275ENST00000514434 ILDR2Q71H61 639 aa19.32■□□□□ 0.68
DDR1-275ENST00000514434 C19orf44Q9H6X5 657 aa19.31■□□□□ 0.68
DDR1-275ENST00000514434 ROBO1Q9Y6N7 1651 aa19.3■□□□□ 0.68
DDR1-275ENST00000514434 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
DDR1-275ENST00000514434 CADPS2Q86UW7 1296 aa19.29■□□□□ 0.68
DDR1-275ENST00000514434 PPLO60437 1756 aa19.29■□□□□ 0.68
DDR1-275ENST00000514434 XRN1Q8IZH2 1706 aaKnown RBP19.28■□□□□ 0.68
DDR1-275ENST00000514434 ADGRF5Q8IZF2 1346 aa19.28■□□□□ 0.68
DDR1-275ENST00000514434 MED1Q15648 1581 aaPredicted RBP19.27■□□□□ 0.68
DDR1-275ENST00000514434 SPATA31E1Q6ZUB1 1445 aa19.27■□□□□ 0.68
DDR1-275ENST00000514434 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.27■□□□□ 0.68
DDR1-275ENST00000514434 PHF23Q9BUL5 403 aaPredicted RBP19.24■□□□□ 0.67
DDR1-275ENST00000514434 ANKRD30BQ9BXX2 1392 aa19.22■□□□□ 0.67
DDR1-275ENST00000514434 STK26Q9P289 416 aa19.22■□□□□ 0.67
DDR1-275ENST00000514434 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
DDR1-275ENST00000514434 ROBO2Q9HCK4 1378 aa19.21■□□□□ 0.67
DDR1-275ENST00000514434 TMEM132EQ6IEE7 984 aa19.2■□□□□ 0.66
DDR1-275ENST00000514434 PHLPP1O60346 1717 aa19.2■□□□□ 0.66
DDR1-275ENST00000514434 ADGRL3Q9HAR2 1447 aa19.18■□□□□ 0.66
DDR1-275ENST00000514434 HRCP23327 699 aa19.18■□□□□ 0.66
DDR1-275ENST00000514434 BRINP3Q76B58 766 aa19.18■□□□□ 0.66
DDR1-275ENST00000514434 IFT172Q9UG01 1749 aa19.17■□□□□ 0.66
DDR1-275ENST00000514434 DCCP43146 1447 aa19.17■□□□□ 0.66
DDR1-275ENST00000514434 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
DDR1-275ENST00000514434 NALCNQ8IZF0 1738 aa19.16■□□□□ 0.66
DDR1-275ENST00000514434 MST1RQ04912 1400 aa19.16■□□□□ 0.66
DDR1-275ENST00000514434 WAPLQ7Z5K2 1190 aa19.14■□□□□ 0.65
DDR1-275ENST00000514434 KDM2AQ9Y2K7 1162 aa19.14■□□□□ 0.65
DDR1-275ENST00000514434 PIK3C2GO75747 1445 aa19.14■□□□□ 0.65
DDR1-275ENST00000514434 CFAP70Q5T0N1 1121 aa19.13■□□□□ 0.65
DDR1-275ENST00000514434 JCADQ9P266 1359 aa19.13■□□□□ 0.65
DDR1-275ENST00000514434 DDX17Q92841 729 aaKnown RBP19.12■□□□□ 0.65
DDR1-275ENST00000514434 COL16A1Q07092 1604 aaPredicted RBP19.11■□□□□ 0.65
DDR1-275ENST00000514434 ASXL1Q8IXJ9 1541 aa19.11■□□□□ 0.65
DDR1-275ENST00000514434 LRPPRCP42704 1394 aaKnown RBP19.11■□□□□ 0.65
DDR1-275ENST00000514434 C14orf93Q9H972 538 aaKnown RBP19.11■□□□□ 0.65
DDR1-275ENST00000514434 SOCS7O14512 581 aa19.1■□□□□ 0.65
DDR1-275ENST00000514434 DCAF11Q8TEB1 546 aa19.1■□□□□ 0.65
DDR1-275ENST00000514434 PRAG1Q86YV5 1406 aa19.09■□□□□ 0.65
DDR1-275ENST00000514434 AHDC1Q5TGY3 1603 aaPredicted RBP19.09■□□□□ 0.65
DDR1-275ENST00000514434 MYOM2P54296 1465 aa19.09■□□□□ 0.65
DDR1-275ENST00000514434 C1orf167Q5SNV9 1468 aa19.09■□□□□ 0.65
DDR1-275ENST00000514434 YTHDC2Q9H6S0 1430 aaKnown RBP19.08■□□□□ 0.65
DDR1-275ENST00000514434 PLEKHH1Q9ULM0 1364 aa19.08■□□□□ 0.65
DDR1-275ENST00000514434 ORAI2Q96SN7 254 aa19.08■□□□□ 0.64
DDR1-275ENST00000514434 RGS17Q9UGC6 210 aaPredicted RBP19.08■□□□□ 0.64
DDR1-275ENST00000514434 ABCC11Q96J66 1382 aa19.07■□□□□ 0.64
DDR1-275ENST00000514434 NUTM2FA1L443 756 aa19.07■□□□□ 0.64
DDR1-275ENST00000514434 NRXN1Q9ULB1 1477 aa19.07■□□□□ 0.64
DDR1-275ENST00000514434 TECPR2O15040 1411 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms