RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
ARHGEF28-213ENST00000513841 E9PCH4 1651 aa17.28■□□□□ 0.36
ARHGEF28-213ENST00000513841 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.36
ARHGEF28-213ENST00000513841 RIMS2Q9UQ26 1411 aa17.27■□□□□ 0.35
ARHGEF28-213ENST00000513841 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
ARHGEF28-213ENST00000513841 KDM5AP29375 1690 aaKnown RBP17.26■□□□□ 0.35
ARHGEF28-213ENST00000513841 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF28-213ENST00000513841 TBX22Q9Y458 520 aa17.26■□□□□ 0.35
ARHGEF28-213ENST00000513841 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
ARHGEF28-213ENST00000513841 ACIN1Q9UKV3 1341 aaKnown RBP17.23■□□□□ 0.35
ARHGEF28-213ENST00000513841 ZFYVE9O95405 1425 aa17.23■□□□□ 0.35
ARHGEF28-213ENST00000513841 PLEKHG1Q9ULL1 1385 aa17.23■□□□□ 0.35
ARHGEF28-213ENST00000513841 TMEM131LA2VDJ0 1609 aa17.22■□□□□ 0.35
ARHGEF28-213ENST00000513841 FOXD1Q16676 465 aa17.22■□□□□ 0.35
ARHGEF28-213ENST00000513841 LRRC7Q96NW7 1537 aa17.21■□□□□ 0.35
ARHGEF28-213ENST00000513841 RBM33Q96EV2 1170 aaKnown RBP17.21■□□□□ 0.35
ARHGEF28-213ENST00000513841 SETD5Q9C0A6 1442 aa17.18■□□□□ 0.34
ARHGEF28-213ENST00000513841 TMEM94Q12767 1356 aa17.16■□□□□ 0.34
ARHGEF28-213ENST00000513841 STRCP1A6NGW2 1772 aa17.16■□□□□ 0.34
ARHGEF28-213ENST00000513841 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
ARHGEF28-213ENST00000513841 HSPA1LP34931 641 aa17.16■□□□□ 0.34
ARHGEF28-213ENST00000513841 MYO5BQ9ULV0 1848 aa17.16■□□□□ 0.34
ARHGEF28-213ENST00000513841 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
ARHGEF28-213ENST00000513841 RPGRIP1LQ68CZ1 1315 aa17.14■□□□□ 0.33
ARHGEF28-213ENST00000513841 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
ARHGEF28-213ENST00000513841 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
ARHGEF28-213ENST00000513841 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
ARHGEF28-213ENST00000513841 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
ARHGEF28-213ENST00000513841 PIK3R4Q99570 1358 aa17.11■□□□□ 0.33
ARHGEF28-213ENST00000513841 TRPM2O94759 1503 aa17.11■□□□□ 0.33
ARHGEF28-213ENST00000513841 HRCP23327 699 aa17.1■□□□□ 0.33
ARHGEF28-213ENST00000513841 RAB3GAP2Q9H2M9 1393 aa17.1■□□□□ 0.33
ARHGEF28-213ENST00000513841 CLTCL1P53675 1640 aa17.09■□□□□ 0.33
ARHGEF28-213ENST00000513841 SLAIN2Q9P270 581 aa17.08■□□□□ 0.32
ARHGEF28-213ENST00000513841 CCDC144AA2RUR9 1427 aa17.07■□□□□ 0.32
ARHGEF28-213ENST00000513841 MSH6P52701 1360 aa17.07■□□□□ 0.32
ARHGEF28-213ENST00000513841 C19orf44Q9H6X5 657 aa17.07■□□□□ 0.32
ARHGEF28-213ENST00000513841 DISP3Q9P2K9 1392 aa17.05■□□□□ 0.32
ARHGEF28-213ENST00000513841 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
ARHGEF28-213ENST00000513841 METP08581 1390 aa17.04■□□□□ 0.32
ARHGEF28-213ENST00000513841 ATF3P18847 181 aa17.04■□□□□ 0.32
ARHGEF28-213ENST00000513841 KIF1BO60333 1816 aa17.04■□□□□ 0.32
ARHGEF28-213ENST00000513841 NCOA3Q9Y6Q9 1424 aa17.04■□□□□ 0.32
ARHGEF28-213ENST00000513841 ALKQ9UM73 1620 aa17.03■□□□□ 0.32
ARHGEF28-213ENST00000513841 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
ARHGEF28-213ENST00000513841 FAM135BQ49AJ0 1406 aa17.03■□□□□ 0.32
ARHGEF28-213ENST00000513841 PTPRUQ92729 1446 aa17.03■□□□□ 0.32
ARHGEF28-213ENST00000513841 CADPS2Q86UW7 1296 aa17.02■□□□□ 0.32
ARHGEF28-213ENST00000513841 DIP2AQ14689 1571 aa17.01■□□□□ 0.31
ARHGEF28-213ENST00000513841 NWD1Q149M9 1564 aa17.01■□□□□ 0.31
ARHGEF28-213ENST00000513841 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
ARHGEF28-213ENST00000513841 ADGRF5Q8IZF2 1346 aa17■□□□□ 0.31
ARHGEF28-213ENST00000513841 XIRP1Q702N8 1843 aaKnown RBP17■□□□□ 0.31
ARHGEF28-213ENST00000513841 SETBP1Q9Y6X0 1596 aa16.99■□□□□ 0.31
ARHGEF28-213ENST00000513841 ANKRD30BQ9BXX2 1392 aa16.98■□□□□ 0.31
ARHGEF28-213ENST00000513841 SPATA31E1Q6ZUB1 1445 aa16.97■□□□□ 0.31
ARHGEF28-213ENST00000513841 STK26Q9P289 416 aa16.95■□□□□ 0.3
ARHGEF28-213ENST00000513841 TMEM132EQ6IEE7 984 aa16.94■□□□□ 0.3
ARHGEF28-213ENST00000513841 NRXN3Q9Y4C0 1643 aa16.94■□□□□ 0.3
ARHGEF28-213ENST00000513841 C14orf93Q9H972 538 aaKnown RBP16.92■□□□□ 0.3
ARHGEF28-213ENST00000513841 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
ARHGEF28-213ENST00000513841 ILDR2Q71H61 639 aa16.91■□□□□ 0.3
ARHGEF28-213ENST00000513841 CFAP70Q5T0N1 1121 aa16.9■□□□□ 0.3
ARHGEF28-213ENST00000513841 DCAF11Q8TEB1 546 aa16.9■□□□□ 0.3
ARHGEF28-213ENST00000513841 ROBO2Q9HCK4 1378 aa16.89■□□□□ 0.3
ARHGEF28-213ENST00000513841 BRINP3Q76B58 766 aa16.89■□□□□ 0.29
ARHGEF28-213ENST00000513841 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF28-213ENST00000513841 WAPLQ7Z5K2 1190 aa16.88■□□□□ 0.29
ARHGEF28-213ENST00000513841 STAC3Q96MF2 364 aa16.88■□□□□ 0.29
ARHGEF28-213ENST00000513841 PPLO60437 1756 aa16.87■□□□□ 0.29
ARHGEF28-213ENST00000513841 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF28-213ENST00000513841 ROBO1Q9Y6N7 1651 aa16.86■□□□□ 0.29
ARHGEF28-213ENST00000513841 XRN1Q8IZH2 1706 aaKnown RBP16.85■□□□□ 0.29
ARHGEF28-213ENST00000513841 SIRT1Q96EB6 747 aa16.85■□□□□ 0.29
ARHGEF28-213ENST00000513841 LRPPRCP42704 1394 aaKnown RBP16.85■□□□□ 0.29
ARHGEF28-213ENST00000513841 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
ARHGEF28-213ENST00000513841 DCCP43146 1447 aa16.85■□□□□ 0.29
ARHGEF28-213ENST00000513841 ADGRL3Q9HAR2 1447 aa16.85■□□□□ 0.29
ARHGEF28-213ENST00000513841 DHX57Q6P158 1386 aaKnown RBP16.84■□□□□ 0.29
ARHGEF28-213ENST00000513841 PIK3C2GO75747 1445 aa16.83■□□□□ 0.28
ARHGEF28-213ENST00000513841 PTCH1Q13635 1447 aa16.83■□□□□ 0.28
ARHGEF28-213ENST00000513841 JCADQ9P266 1359 aa16.82■□□□□ 0.28
ARHGEF28-213ENST00000513841 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
ARHGEF28-213ENST00000513841 MST1RQ04912 1400 aa16.81■□□□□ 0.28
ARHGEF28-213ENST00000513841 DDX17Q92841 729 aaKnown RBP16.81■□□□□ 0.28
ARHGEF28-213ENST00000513841 LRRC59Q96AG4 307 aaKnown RBP16.81■□□□□ 0.28
ARHGEF28-213ENST00000513841 YTHDC2Q9H6S0 1430 aaKnown RBP16.8■□□□□ 0.28
ARHGEF28-213ENST00000513841 POGKQ9P215 609 aa16.8■□□□□ 0.28
ARHGEF28-213ENST00000513841 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
ARHGEF28-213ENST00000513841 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
ARHGEF28-213ENST00000513841 SETD1AO15047 1707 aaKnown RBP16.79■□□□□ 0.28
ARHGEF28-213ENST00000513841 MED1Q15648 1581 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF28-213ENST00000513841 TRIM26Q12899 539 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF28-213ENST00000513841 TRAK1Q9UPV9 953 aa16.78■□□□□ 0.28
ARHGEF28-213ENST00000513841 MYOM2P54296 1465 aa16.78■□□□□ 0.28
ARHGEF28-213ENST00000513841 PRAG1Q86YV5 1406 aa16.78■□□□□ 0.28
ARHGEF28-213ENST00000513841 PLEKHH1Q9ULM0 1364 aa16.77■□□□□ 0.28
ARHGEF28-213ENST00000513841 SAFB2Q14151 953 aaKnown RBP eCLIP16.77■□□□□ 0.28
ARHGEF28-213ENST00000513841 PRAM1Q96QH2 718 aa16.77■□□□□ 0.28
ARHGEF28-213ENST00000513841 C1orf167Q5SNV9 1468 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms