RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.66■■■□□ 2.5
NEIL3-202ENST00000513321 ZFYVE9O95405 1425 aa30.66■■■□□ 2.5
NEIL3-202ENST00000513321 SPATA31E1Q6ZUB1 1445 aa30.66■■■□□ 2.5
NEIL3-202ENST00000513321 NUTM2DQ5VT03 806 aaPredicted RBP30.65■■■□□ 2.5
NEIL3-202ENST00000513321 SCAF11Q99590 1463 aaKnown RBP30.65■■■□□ 2.5
NEIL3-202ENST00000513321 PPP1R15AO75807 674 aaPredicted RBP30.63■■■□□ 2.49
NEIL3-202ENST00000513321 RPGRIP1LQ68CZ1 1315 aa30.61■■■□□ 2.49
NEIL3-202ENST00000513321 SIN3AQ96ST3 1273 aa30.61■■■□□ 2.49
NEIL3-202ENST00000513321 NEURL4Q96JN8 1562 aa30.59■■■□□ 2.49
NEIL3-202ENST00000513321 MED14O60244 1454 aa30.59■■■□□ 2.49
NEIL3-202ENST00000513321 POLR1AO95602 1720 aaPredicted RBP30.59■■■□□ 2.49
NEIL3-202ENST00000513321 NPHP4O75161 1426 aaPredicted RBP30.59■■■□□ 2.49
NEIL3-202ENST00000513321 SENP3Q9H4L4 574 aaPredicted RBP30.57■■■□□ 2.48
NEIL3-202ENST00000513321 NEUROD1Q13562 356 aa30.56■■■□□ 2.48
NEIL3-202ENST00000513321 BCANQ96GW7 911 aa30.56■■■□□ 2.48
NEIL3-202ENST00000513321 NEXMIFQ5QGS0 1516 aa30.55■■■□□ 2.48
NEIL3-202ENST00000513321 VGFO15240 615 aaPredicted RBP30.54■■■□□ 2.48
NEIL3-202ENST00000513321 PLEKHG1Q9ULL1 1385 aa30.52■■■□□ 2.48
NEIL3-202ENST00000513321 CCER1Q8TC90 406 aaPredicted RBP30.49■■■□□ 2.47
NEIL3-202ENST00000513321 SLC26A8Q96RN1 970 aa30.49■■■□□ 2.47
NEIL3-202ENST00000513321 IQGAP1P46940 1657 aa30.48■■■□□ 2.47
NEIL3-202ENST00000513321 DCAF11Q8TEB1 546 aa30.46■■■□□ 2.47
NEIL3-202ENST00000513321 ADGRF5Q8IZF2 1346 aa30.45■■■□□ 2.47
NEIL3-202ENST00000513321 PPLO60437 1756 aa30.45■■■□□ 2.46
NEIL3-202ENST00000513321 KDM2AQ9Y2K7 1162 aa30.44■■■□□ 2.46
NEIL3-202ENST00000513321 CLSPNQ9HAW4 1339 aa30.42■■■□□ 2.46
NEIL3-202ENST00000513321 TBX22Q9Y458 520 aa30.42■■■□□ 2.46
NEIL3-202ENST00000513321 ADAMTS13Q76LX8 1427 aa30.39■■■□□ 2.46
NEIL3-202ENST00000513321 IFT172Q9UG01 1749 aa30.39■■■□□ 2.46
NEIL3-202ENST00000513321 L3MBTL2Q969R5 705 aa30.39■■■□□ 2.46
NEIL3-202ENST00000513321 STAC3Q96MF2 364 aa30.39■■■□□ 2.46
NEIL3-202ENST00000513321 ZNF335Q9H4Z2 1342 aaPredicted RBP30.37■■■□□ 2.45
NEIL3-202ENST00000513321 SETBP1Q9Y6X0 1596 aa30.36■■■□□ 2.45
NEIL3-202ENST00000513321 MYOM2P54296 1465 aa30.35■■■□□ 2.45
NEIL3-202ENST00000513321 NRXN3Q9Y4C0 1643 aa30.33■■■□□ 2.45
NEIL3-202ENST00000513321 NRXN1Q9ULB1 1477 aa30.31■■■□□ 2.44
NEIL3-202ENST00000513321 TONSLQ96HA7 1378 aa30.3■■■□□ 2.44
NEIL3-202ENST00000513321 PIK3C2GO75747 1445 aa30.3■■■□□ 2.44
NEIL3-202ENST00000513321 DIP2AQ14689 1571 aa30.29■■■□□ 2.44
NEIL3-202ENST00000513321 METP08581 1390 aa30.27■■■□□ 2.44
NEIL3-202ENST00000513321 KCNA6P17658 529 aa30.27■■■□□ 2.44
NEIL3-202ENST00000513321 C14orf93Q9H972 538 aaKnown RBP30.27■■■□□ 2.44
NEIL3-202ENST00000513321 ALKQ9UM73 1620 aa30.27■■■□□ 2.44
NEIL3-202ENST00000513321 CFAP70Q5T0N1 1121 aa30.27■■■□□ 2.44
NEIL3-202ENST00000513321 PIK3R4Q99570 1358 aa30.26■■■□□ 2.43
NEIL3-202ENST00000513321 LTBP4Q8N2S1 1624 aa30.22■■■□□ 2.43
NEIL3-202ENST00000513321 AMOTL2Q9Y2J4 779 aa30.22■■■□□ 2.43
NEIL3-202ENST00000513321 TMEM132EQ6IEE7 984 aa30.21■■■□□ 2.43
NEIL3-202ENST00000513321 PTPRUQ92729 1446 aa30.2■■■□□ 2.42
NEIL3-202ENST00000513321 PRAG1Q86YV5 1406 aa30.19■■■□□ 2.42
NEIL3-202ENST00000513321 SETD1AO15047 1707 aaKnown RBP30.18■■■□□ 2.42
NEIL3-202ENST00000513321 TIMELESSQ9UNS1 1208 aa30.17■■■□□ 2.42
NEIL3-202ENST00000513321 STRCP1A6NGW2 1772 aa30.17■■■□□ 2.42
NEIL3-202ENST00000513321 CHD2O14647 1828 aaKnown RBP30.16■■■□□ 2.42
NEIL3-202ENST00000513321 PROSER2Q86WR7 435 aaPredicted RBP30.15■■■□□ 2.42
NEIL3-202ENST00000513321 CPS1P31327 1500 aa30.15■■■□□ 2.42
NEIL3-202ENST00000513321 NWD1Q149M9 1564 aa30.13■■■□□ 2.41
NEIL3-202ENST00000513321 CERKQ8TCT0 537 aa30.13■■■□□ 2.41
NEIL3-202ENST00000513321 STK26Q9P289 416 aa30.13■■■□□ 2.41
NEIL3-202ENST00000513321 NBPF8Q3BBV2 869 aa30.12■■■□□ 2.41
NEIL3-202ENST00000513321 LAMC1P11047 1609 aa30.11■■■□□ 2.41
NEIL3-202ENST00000513321 ASXL1Q8IXJ9 1541 aa30.1■■■□□ 2.41
NEIL3-202ENST00000513321 NBPF1Q3BBV0 1214 aa30.1■■■□□ 2.41
NEIL3-202ENST00000513321 RBM33Q96EV2 1170 aaKnown RBP30.1■■■□□ 2.41
NEIL3-202ENST00000513321 NKTRP30414 1462 aaKnown RBP30.09■■■□□ 2.41
NEIL3-202ENST00000513321 LRRC7Q96NW7 1537 aa30.09■■■□□ 2.41
NEIL3-202ENST00000513321 LRPPRCP42704 1394 aaKnown RBP30.09■■■□□ 2.41
NEIL3-202ENST00000513321 YTHDC2Q9H6S0 1430 aaKnown RBP30.07■■■□□ 2.4
NEIL3-202ENST00000513321 XRN1Q8IZH2 1706 aaKnown RBP30.06■■■□□ 2.4
NEIL3-202ENST00000513321 TMEM94Q12767 1356 aa30.06■■■□□ 2.4
NEIL3-202ENST00000513321 ABCC11Q96J66 1382 aa30.06■■■□□ 2.4
NEIL3-202ENST00000513321 ADGRB1O14514 1584 aa30.05■■■□□ 2.4
NEIL3-202ENST00000513321 ROBO2Q9HCK4 1378 aa30.03■■■□□ 2.4
NEIL3-202ENST00000513321 KIAA1210Q9ULL0 1709 aa30.02■■■□□ 2.4
NEIL3-202ENST00000513321 TRAK1Q9UPV9 953 aa30.01■■■□□ 2.39
NEIL3-202ENST00000513321 TECPR2O15040 1411 aa30■■■□□ 2.39
NEIL3-202ENST00000513321 PTCH1Q13635 1447 aa29.99■■■□□ 2.39
NEIL3-202ENST00000513321 WAPLQ7Z5K2 1190 aa29.98■■■□□ 2.39
NEIL3-202ENST00000513321 SIRT1Q96EB6 747 aa29.98■■■□□ 2.39
NEIL3-202ENST00000513321 C14orf37Q86TY3 774 aa29.97■■■□□ 2.39
NEIL3-202ENST00000513321 TRPM1Q7Z4N2 1603 aa29.97■■■□□ 2.39
NEIL3-202ENST00000513321 ROCK2O75116 1388 aaKnown RBP29.97■■■□□ 2.39
NEIL3-202ENST00000513321 NCOA3Q9Y6Q9 1424 aa29.95■■■□□ 2.39
NEIL3-202ENST00000513321 IQSEC2Q5JU85 1478 aa29.95■■■□□ 2.38
NEIL3-202ENST00000513321 PRAM1Q96QH2 718 aa29.93■■■□□ 2.38
NEIL3-202ENST00000513321 XIRP1Q702N8 1843 aaKnown RBP29.92■■■□□ 2.38
NEIL3-202ENST00000513321 FAM135BQ49AJ0 1406 aa29.92■■■□□ 2.38
NEIL3-202ENST00000513321 PLEKHH1Q9ULM0 1364 aa29.92■■■□□ 2.38
NEIL3-202ENST00000513321 POGKQ9P215 609 aa29.91■■■□□ 2.38
NEIL3-202ENST00000513321 RALGAPBQ86X10 1494 aa29.91■■■□□ 2.38
NEIL3-202ENST00000513321 KNDC1Q76NI1 1749 aa29.91■■■□□ 2.38
NEIL3-202ENST00000513321 C19orf44Q9H6X5 657 aa29.91■■■□□ 2.38
NEIL3-202ENST00000513321 CARD11Q9BXL7 1154 aa29.9■■■□□ 2.38
NEIL3-202ENST00000513321 DLC1Q96QB1 1528 aa29.9■■■□□ 2.38
NEIL3-202ENST00000513321 MSH6P52701 1360 aa29.89■■■□□ 2.38
NEIL3-202ENST00000513321 GPRASP1Q5JY77 1395 aa29.89■■■□□ 2.38
NEIL3-202ENST00000513321 SAFB2Q14151 953 aaKnown RBP eCLIP29.88■■■□□ 2.37
NEIL3-202ENST00000513321 UBAP1LF5GYI3 381 aa29.86■■■□□ 2.37
NEIL3-202ENST00000513321 ADGRL3Q9HAR2 1447 aa29.84■■■□□ 2.37
NEIL3-202ENST00000513321 TOM1O60784 492 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms