RNA–Protein interactions for RNA: ENST00000513291.1

ATR-206, Transcript of ATR serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATR, Length 5,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-206ENST00000513291 RTEL1-TNFRSF6BF6WH68 1400 aa7.81□□□□□ -1.16
ATR-206ENST00000513291 PTPRKQ15262 1439 aa7.81□□□□□ -1.16
ATR-206ENST00000513291 TRAPPC8Q9Y2L5 1435 aa7.81□□□□□ -1.16
ATR-206ENST00000513291 CFAP70Q5T0N1 1121 aa7.81□□□□□ -1.16
ATR-206ENST00000513291 TXNDC2Q86VQ3 553 aa7.81□□□□□ -1.16
ATR-206ENST00000513291 CFAP44Q96MT7 982 aa7.81□□□□□ -1.16
ATR-206ENST00000513291 CCDC9Q9Y3X0 531 aaKnown RBP7.8□□□□□ -1.16
ATR-206ENST00000513291 KIF7Q2M1P5 1343 aa7.8□□□□□ -1.16
ATR-206ENST00000513291 U2AF1L5P0DN76 240 aaPredicted RBP7.8□□□□□ -1.16
ATR-206ENST00000513291 PDIA4P13667 645 aaKnown RBP7.8□□□□□ -1.16
ATR-206ENST00000513291 U2AF1Q01081 240 aaKnown RBP eCLIP7.8□□□□□ -1.16
ATR-206ENST00000513291 TSHZ2Q9NRE2 1034 aa7.8□□□□□ -1.16
ATR-206ENST00000513291 USP35Q9P2H5 1018 aa7.8□□□□□ -1.16
ATR-206ENST00000513291 LAS1LQ9Y4W2 734 aaKnown RBP7.8□□□□□ -1.16
ATR-206ENST00000513291 UPF2Q9HAU5 1272 aaKnown RBP7.8□□□□□ -1.16
ATR-206ENST00000513291 CNTLNQ9NXG0 1405 aa7.79□□□□□ -1.16
ATR-206ENST00000513291 CFAP74Q9C0B2 1584 aa7.79□□□□□ -1.16
ATR-206ENST00000513291 KCNA4P22459 653 aa7.79□□□□□ -1.16
ATR-206ENST00000513291 NUTM2FA1L443 756 aa7.79□□□□□ -1.16
ATR-206ENST00000513291 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATR-206ENST00000513291 RPRD2Q5VT52 1461 aaKnown RBP7.79□□□□□ -1.16
ATR-206ENST00000513291 SENP3-EIF4A1A0A087X0R7 540 aa7.79□□□□□ -1.16
ATR-206ENST00000513291 CALD1Q05682 793 aaKnown RBP7.79□□□□□ -1.16
ATR-206ENST00000513291 TMEM132EQ6IEE7 984 aa7.79□□□□□ -1.16
ATR-206ENST00000513291 KLHL34Q8N239 644 aa7.79□□□□□ -1.16
ATR-206ENST00000513291 COG3Q96JB2 828 aa7.78□□□□□ -1.16
ATR-206ENST00000513291 MS4A1P11836 297 aa7.78□□□□□ -1.16
ATR-206ENST00000513291 FTSJ3Q8IY81 847 aaKnown RBP7.78□□□□□ -1.16
ATR-206ENST00000513291 RTF1Q92541 710 aaKnown RBP7.78□□□□□ -1.16
ATR-206ENST00000513291 PRKRIP1Q9H875 184 aaPredicted RBP7.78□□□□□ -1.16
ATR-206ENST00000513291 TNNT3P45378 269 aaPredicted RBP7.78□□□□□ -1.16
ATR-206ENST00000513291 NBPF8Q3BBV2 869 aa7.78□□□□□ -1.16
ATR-206ENST00000513291 ADGRL2O95490 1459 aa7.78□□□□□ -1.16
ATR-206ENST00000513291 MAGI3Q5TCQ9 1506 aa7.78□□□□□ -1.16
ATR-206ENST00000513291 MYO5CQ9NQX4 1742 aa7.77□□□□□ -1.16
ATR-206ENST00000513291 NEO1Q92859 1461 aa7.77□□□□□ -1.17
ATR-206ENST00000513291 L1TD1Q5T7N2 865 aaKnown RBP7.77□□□□□ -1.17
ATR-206ENST00000513291 IRX6P78412 446 aaPredicted RBP7.77□□□□□ -1.17
ATR-206ENST00000513291 CSB-PGBD3P0DP91 1061 aa7.77□□□□□ -1.17
ATR-206ENST00000513291 AMPHP49418 695 aa7.77□□□□□ -1.17
ATR-206ENST00000513291 NBPF1Q3BBV0 1214 aa7.77□□□□□ -1.17
ATR-206ENST00000513291 CHMP4BQ9H444 224 aaKnown RBP7.77□□□□□ -1.17
ATR-206ENST00000513291 ATP7AQ04656 1500 aa7.76□□□□□ -1.17
ATR-206ENST00000513291 CALRP27797 417 aaKnown RBP7.76□□□□□ -1.17
ATR-206ENST00000513291 ANKLE2Q86XL3 938 aa7.76□□□□□ -1.17
ATR-206ENST00000513291 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.76□□□□□ -1.17
ATR-206ENST00000513291 ARHGEF5Q12774 1597 aa7.75□□□□□ -1.17
ATR-206ENST00000513291 ZCCHC11Q5TAX3 1644 aaKnown RBP7.75□□□□□ -1.17
ATR-206ENST00000513291 PRAM1Q96QH2 718 aa7.75□□□□□ -1.17
ATR-206ENST00000513291 WASHC2AQ641Q2 1341 aa7.75□□□□□ -1.17
ATR-206ENST00000513291 APPP05067 770 aa7.75□□□□□ -1.17
ATR-206ENST00000513291 ATF3P18847 181 aa7.75□□□□□ -1.17
ATR-206ENST00000513291 LMOD3Q0VAK6 560 aa7.75□□□□□ -1.17
ATR-206ENST00000513291 ADGBQ8N7X0 1667 aa7.74□□□□□ -1.17
ATR-206ENST00000513291 MAPKBP1O60336 1514 aa7.74□□□□□ -1.17
ATR-206ENST00000513291 DNTTIP2Q5QJE6 756 aaKnown RBP7.74□□□□□ -1.17
ATR-206ENST00000513291 CABP2Q9NPB3 220 aa7.74□□□□□ -1.17
ATR-206ENST00000513291 PDE3BQ13370 1112 aa7.73□□□□□ -1.17
ATR-206ENST00000513291 FRAT1Q92837 279 aaPredicted RBP7.73□□□□□ -1.17
ATR-206ENST00000513291 TNRQ92752 1358 aa7.73□□□□□ -1.17
ATR-206ENST00000513291 PSME1Q06323 249 aa7.73□□□□□ -1.17
ATR-206ENST00000513291 IDI1Q13907 227 aa7.73□□□□□ -1.17
ATR-206ENST00000513291 CHMP4AQ9BY43 222 aa7.73□□□□□ -1.17
ATR-206ENST00000513291 ATAD2Q6PL18 1390 aa7.72□□□□□ -1.17
ATR-206ENST00000513291 BECN1Q14457 450 aa7.72□□□□□ -1.17
ATR-206ENST00000513291 FBXO31Q5XUX0 539 aaPredicted RBP7.72□□□□□ -1.17
ATR-206ENST00000513291 PREX2Q70Z35 1606 aa7.72□□□□□ -1.17
ATR-206ENST00000513291 CLASP1Q7Z460 1538 aa7.72□□□□□ -1.17
ATR-206ENST00000513291 AEBP2Q6ZN18 517 aaPredicted RBP7.72□□□□□ -1.17
ATR-206ENST00000513291 ERCC6L2Q5T890 1561 aa7.72□□□□□ -1.17
ATR-206ENST00000513291 MAST1Q9Y2H9 1570 aa7.72□□□□□ -1.17
ATR-206ENST00000513291 ATP10AO60312 1499 aa7.72□□□□□ -1.17
ATR-206ENST00000513291 NOS1P29475 1434 aa7.72□□□□□ -1.17
ATR-206ENST00000513291 GCC2Q8IWJ2 1684 aa7.71□□□□□ -1.17
ATR-206ENST00000513291 GOLGA2Q08379 1002 aa7.71□□□□□ -1.17
ATR-206ENST00000513291 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.17
ATR-206ENST00000513291 TTC37Q6PGP7 1564 aa7.71□□□□□ -1.18
ATR-206ENST00000513291 GPRASP1Q5JY77 1395 aa7.71□□□□□ -1.18
ATR-206ENST00000513291 HSP90B1P14625 803 aaKnown RBP7.71□□□□□ -1.18
ATR-206ENST00000513291 NGEFQ8N5V2 710 aa7.7□□□□□ -1.18
ATR-206ENST00000513291 CCDC146Q8IYE0 955 aa7.7□□□□□ -1.18
ATR-206ENST00000513291 SLC26A8Q96RN1 970 aa7.7□□□□□ -1.18
ATR-206ENST00000513291 PPP4R2Q9NY27 417 aa7.7□□□□□ -1.18
ATR-206ENST00000513291 DIAPH1O60610 1272 aaKnown RBP7.7□□□□□ -1.18
ATR-206ENST00000513291 SCAF11Q99590 1463 aaKnown RBP7.7□□□□□ -1.18
ATR-206ENST00000513291 SAMD9LQ8IVG5 1584 aa7.7□□□□□ -1.18
ATR-206ENST00000513291 ZFYVE16Q7Z3T8 1539 aa7.7□□□□□ -1.18
ATR-206ENST00000513291 IPO8O15397 1037 aaKnown RBP7.7□□□□□ -1.18
ATR-206ENST00000513291 CDK19Q9BWU1 502 aa7.7□□□□□ -1.18
ATR-206ENST00000513291 BRD4O60885 1362 aaPredicted RBP7.7□□□□□ -1.18
ATR-206ENST00000513291 ABCC1P33527 1531 aa7.7□□□□□ -1.18
ATR-206ENST00000513291 ADCY10Q96PN6 1610 aa7.69□□□□□ -1.18
ATR-206ENST00000513291 ADGRF5Q8IZF2 1346 aa7.69□□□□□ -1.18
ATR-206ENST00000513291 LTV1Q96GA3 475 aaPredicted RBP7.69□□□□□ -1.18
ATR-206ENST00000513291 EIF2AK4Q9P2K8 1649 aaKnown RBP7.69□□□□□ -1.18
ATR-206ENST00000513291 RCAN3Q9UKA8 241 aa7.69□□□□□ -1.18
ATR-206ENST00000513291 PZPP20742 1482 aa7.69□□□□□ -1.18
ATR-206ENST00000513291 MSNP26038 577 aaKnown RBP7.69□□□□□ -1.18
ATR-206ENST00000513291 ZNF692Q9BU19 519 aaPredicted RBP7.69□□□□□ -1.18
ATR-206ENST00000513291 CEBPAP49715 358 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms