RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 TMEM131LA2VDJ0 1609 aa16.92■□□□□ 0.3
SKP2-207ENST00000513263 IDI1Q13907 227 aa16.91■□□□□ 0.3
SKP2-207ENST00000513263 HDGFP51858 240 aaKnown RBP16.9■□□□□ 0.3
SKP2-207ENST00000513263 PHF23Q9BUL5 403 aaPredicted RBP16.88■□□□□ 0.29
SKP2-207ENST00000513263 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
SKP2-207ENST00000513263 ZFYVE9O95405 1425 aa16.87■□□□□ 0.29
SKP2-207ENST00000513263 PLEKHG1Q9ULL1 1385 aa16.87■□□□□ 0.29
SKP2-207ENST00000513263 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
SKP2-207ENST00000513263 KCNA6P17658 529 aa16.86■□□□□ 0.29
SKP2-207ENST00000513263 SPHKAPQ2M3C7 1700 aa16.86■□□□□ 0.29
SKP2-207ENST00000513263 TMEM94Q12767 1356 aa16.85■□□□□ 0.29
SKP2-207ENST00000513263 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
SKP2-207ENST00000513263 MSH6P52701 1360 aa16.84■□□□□ 0.29
SKP2-207ENST00000513263 RIMS2Q9UQ26 1411 aa16.84■□□□□ 0.29
SKP2-207ENST00000513263 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.83■□□□□ 0.28
SKP2-207ENST00000513263 NCOA3Q9Y6Q9 1424 aa16.82■□□□□ 0.28
SKP2-207ENST00000513263 PIK3R4Q99570 1358 aa16.81■□□□□ 0.28
SKP2-207ENST00000513263 BCANQ96GW7 911 aa16.81■□□□□ 0.28
SKP2-207ENST00000513263 TRPM2O94759 1503 aa16.8■□□□□ 0.28
SKP2-207ENST00000513263 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
SKP2-207ENST00000513263 PROSER2Q86WR7 435 aaPredicted RBP16.79■□□□□ 0.28
SKP2-207ENST00000513263 SLC26A8Q96RN1 970 aa16.79■□□□□ 0.28
SKP2-207ENST00000513263 KIF1BO60333 1816 aa16.77■□□□□ 0.28
SKP2-207ENST00000513263 NUP155O75694 1391 aa16.77■□□□□ 0.27
SKP2-207ENST00000513263 TBX22Q9Y458 520 aa16.75■□□□□ 0.27
SKP2-207ENST00000513263 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.74■□□□□ 0.27
SKP2-207ENST00000513263 SETBP1Q9Y6X0 1596 aa16.74■□□□□ 0.27
SKP2-207ENST00000513263 XRN1Q8IZH2 1706 aaKnown RBP16.73■□□□□ 0.27
SKP2-207ENST00000513263 ADAMTS13Q76LX8 1427 aa16.72■□□□□ 0.27
SKP2-207ENST00000513263 CHGAP10645 457 aaKnown RBP16.72■□□□□ 0.27
SKP2-207ENST00000513263 DCCP43146 1447 aa16.71■□□□□ 0.27
SKP2-207ENST00000513263 COL16A1Q07092 1604 aaPredicted RBP16.71■□□□□ 0.27
SKP2-207ENST00000513263 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
SKP2-207ENST00000513263 AHDC1Q5TGY3 1603 aaPredicted RBP16.7■□□□□ 0.26
SKP2-207ENST00000513263 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
SKP2-207ENST00000513263 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
SKP2-207ENST00000513263 NRXN3Q9Y4C0 1643 aa16.7■□□□□ 0.26
SKP2-207ENST00000513263 CADPS2Q86UW7 1296 aa16.69■□□□□ 0.26
SKP2-207ENST00000513263 JCADQ9P266 1359 aa16.68■□□□□ 0.26
SKP2-207ENST00000513263 SLAIN2Q9P270 581 aa16.68■□□□□ 0.26
SKP2-207ENST00000513263 SETD1AO15047 1707 aaKnown RBP16.67■□□□□ 0.26
SKP2-207ENST00000513263 C14orf37Q86TY3 774 aa16.67■□□□□ 0.26
SKP2-207ENST00000513263 CLTCL1P53675 1640 aa16.67■□□□□ 0.26
SKP2-207ENST00000513263 ITGAEP38570 1179 aa16.66■□□□□ 0.26
SKP2-207ENST00000513263 ATF3P18847 181 aa16.65■□□□□ 0.26
SKP2-207ENST00000513263 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
SKP2-207ENST00000513263 C19orf44Q9H6X5 657 aa16.64■□□□□ 0.25
SKP2-207ENST00000513263 NHSL1Q5SYE7 1610 aa16.63■□□□□ 0.25
SKP2-207ENST00000513263 SPATA31A6Q5VVP1 1343 aa16.62■□□□□ 0.25
SKP2-207ENST00000513263 NAIPQ13075 1403 aa16.62■□□□□ 0.25
SKP2-207ENST00000513263 RBM33Q96EV2 1170 aaKnown RBP16.61■□□□□ 0.25
SKP2-207ENST00000513263 HFM1A2PYH4 1435 aa16.61■□□□□ 0.25
SKP2-207ENST00000513263 NALCNQ8IZF0 1738 aa16.6■□□□□ 0.25
SKP2-207ENST00000513263 PPLO60437 1756 aa16.6■□□□□ 0.25
SKP2-207ENST00000513263 ZNF326Q5BKZ1 582 aaKnown RBP16.6■□□□□ 0.25
SKP2-207ENST00000513263 AMOTL2Q9Y2J4 779 aa16.59■□□□□ 0.25
SKP2-207ENST00000513263 ASXL1Q8IXJ9 1541 aa16.59■□□□□ 0.25
SKP2-207ENST00000513263 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
SKP2-207ENST00000513263 PTCH1Q13635 1447 aa16.57■□□□□ 0.24
SKP2-207ENST00000513263 PTPRUQ92729 1446 aa16.57■□□□□ 0.24
SKP2-207ENST00000513263 NUTM2DQ5VT03 806 aaPredicted RBP16.57■□□□□ 0.24
SKP2-207ENST00000513263 RGS17Q9UGC6 210 aaPredicted RBP16.57■□□□□ 0.24
SKP2-207ENST00000513263 PRAG1Q86YV5 1406 aa16.56■□□□□ 0.24
SKP2-207ENST00000513263 LAMC1P11047 1609 aa16.54■□□□□ 0.24
SKP2-207ENST00000513263 MST1RQ04912 1400 aa16.53■□□□□ 0.24
SKP2-207ENST00000513263 RPGRIP1LQ68CZ1 1315 aa16.53■□□□□ 0.24
SKP2-207ENST00000513263 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
SKP2-207ENST00000513263 ACIN1Q9UKV3 1341 aaKnown RBP16.52■□□□□ 0.24
SKP2-207ENST00000513263 VGFO15240 615 aaPredicted RBP16.52■□□□□ 0.24
SKP2-207ENST00000513263 MEX3CQ5U5Q3 659 aaKnown RBP16.52■□□□□ 0.24
SKP2-207ENST00000513263 ZNF772Q68DY9 489 aaPredicted RBP16.52■□□□□ 0.24
SKP2-207ENST00000513263 LRP6O75581 1613 aa16.52■□□□□ 0.23
SKP2-207ENST00000513263 IFT172Q9UG01 1749 aa16.51■□□□□ 0.23
SKP2-207ENST00000513263 METP08581 1390 aa16.51■□□□□ 0.23
SKP2-207ENST00000513263 BRINP3Q76B58 766 aa16.5■□□□□ 0.23
SKP2-207ENST00000513263 PPARGC1BQ86YN6 1023 aaKnown RBP16.5■□□□□ 0.23
SKP2-207ENST00000513263 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
SKP2-207ENST00000513263 KNDC1Q76NI1 1749 aa16.48■□□□□ 0.23
SKP2-207ENST00000513263 CDC42BPGQ6DT37 1551 aa16.47■□□□□ 0.23
SKP2-207ENST00000513263 TRIM52Q96A61 297 aa16.47■□□□□ 0.23
SKP2-207ENST00000513263 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
SKP2-207ENST00000513263 CDK12Q9NYV4 1490 aaPredicted RBP16.47■□□□□ 0.23
SKP2-207ENST00000513263 CCDC144AA2RUR9 1427 aa16.46■□□□□ 0.23
SKP2-207ENST00000513263 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
SKP2-207ENST00000513263 C1orf167Q5SNV9 1468 aa16.43■□□□□ 0.22
SKP2-207ENST00000513263 COL22A1Q8NFW1 1626 aaPredicted RBP16.42■□□□□ 0.22
SKP2-207ENST00000513263 ANKRD30BQ9BXX2 1392 aa16.42■□□□□ 0.22
SKP2-207ENST00000513263 MARF1Q9Y4F3 1742 aaKnown RBP16.41■□□□□ 0.22
SKP2-207ENST00000513263 TECPR2O15040 1411 aa16.4■□□□□ 0.22
SKP2-207ENST00000513263 KIF1AQ12756 1690 aa16.4■□□□□ 0.22
SKP2-207ENST00000513263 PNPLA6Q8IY17 1366 aa16.39■□□□□ 0.21
SKP2-207ENST00000513263 ROBO2Q9HCK4 1378 aa16.39■□□□□ 0.21
SKP2-207ENST00000513263 SPATA31E1Q6ZUB1 1445 aa16.37■□□□□ 0.21
SKP2-207ENST00000513263 RXRBP28702 533 aa16.36■□□□□ 0.21
SKP2-207ENST00000513263 AFF2P51816 1311 aa16.36■□□□□ 0.21
SKP2-207ENST00000513263 FMN2Q9NZ56 1722 aa16.36■□□□□ 0.21
SKP2-207ENST00000513263 NUTM2BA6NNL0 878 aaPredicted RBP16.35■□□□□ 0.21
SKP2-207ENST00000513263 NUTM2EB1AL46 878 aaPredicted RBP16.35■□□□□ 0.21
SKP2-207ENST00000513263 NUTM2AQ8IVF1 878 aaPredicted RBP16.35■□□□□ 0.21
SKP2-207ENST00000513263 SOS2Q07890 1332 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms