RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 TXNDC2Q86VQ3 553 aa24.04■■□□□ 1.44
HMGCL-209ENST00000513148 RIMS2Q9UQ26 1411 aa24.04■■□□□ 1.44
HMGCL-209ENST00000513148 LTKP29376 864 aa24.03■■□□□ 1.44
HMGCL-209ENST00000513148 EID1Q9Y6B2 187 aa24.03■■□□□ 1.44
HMGCL-209ENST00000513148 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
HMGCL-209ENST00000513148 ZFYVE9O95405 1425 aa24.02■■□□□ 1.44
HMGCL-209ENST00000513148 RGL3Q3MIN7 710 aa24.01■■□□□ 1.43
HMGCL-209ENST00000513148 PPP1R15AO75807 674 aaPredicted RBP24■■□□□ 1.43
HMGCL-209ENST00000513148 SPATA31E1Q6ZUB1 1445 aa23.99■■□□□ 1.43
HMGCL-209ENST00000513148 IQGAP1P46940 1657 aa23.99■■□□□ 1.43
HMGCL-209ENST00000513148 NEXMIFQ5QGS0 1516 aa23.98■■□□□ 1.43
HMGCL-209ENST00000513148 NPHP4O75161 1426 aaPredicted RBP23.98■■□□□ 1.43
HMGCL-209ENST00000513148 MED14O60244 1454 aa23.96■■□□□ 1.43
HMGCL-209ENST00000513148 DMRT2Q9Y5R5 561 aa23.96■■□□□ 1.43
HMGCL-209ENST00000513148 PPLO60437 1756 aa23.96■■□□□ 1.43
HMGCL-209ENST00000513148 HDGFP51858 240 aaKnown RBP23.95■■□□□ 1.42
HMGCL-209ENST00000513148 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.94■■□□□ 1.42
HMGCL-209ENST00000513148 BCANQ96GW7 911 aa23.94■■□□□ 1.42
HMGCL-209ENST00000513148 SIN3AQ96ST3 1273 aa23.94■■□□□ 1.42
HMGCL-209ENST00000513148 SCAF1Q9H7N4 1312 aaKnown RBP23.93■■□□□ 1.42
HMGCL-209ENST00000513148 IFT172Q9UG01 1749 aa23.93■■□□□ 1.42
HMGCL-209ENST00000513148 NEUROD1Q13562 356 aa23.91■■□□□ 1.42
HMGCL-209ENST00000513148 PLEKHG1Q9ULL1 1385 aa23.9■■□□□ 1.42
HMGCL-209ENST00000513148 RPGRIP1LQ68CZ1 1315 aa23.89■■□□□ 1.41
HMGCL-209ENST00000513148 SLC26A8Q96RN1 970 aa23.88■■□□□ 1.41
HMGCL-209ENST00000513148 VGFO15240 615 aaPredicted RBP23.86■■□□□ 1.41
HMGCL-209ENST00000513148 CCER1Q8TC90 406 aaPredicted RBP23.84■■□□□ 1.41
HMGCL-209ENST00000513148 NRXN3Q9Y4C0 1643 aa23.84■■□□□ 1.41
HMGCL-209ENST00000513148 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.41
HMGCL-209ENST00000513148 DCAF11Q8TEB1 546 aa23.83■■□□□ 1.4
HMGCL-209ENST00000513148 KDM2AQ9Y2K7 1162 aa23.83■■□□□ 1.4
HMGCL-209ENST00000513148 SETBP1Q9Y6X0 1596 aa23.82■■□□□ 1.4
HMGCL-209ENST00000513148 ZNF335Q9H4Z2 1342 aaPredicted RBP23.82■■□□□ 1.4
HMGCL-209ENST00000513148 ADAMTS13Q76LX8 1427 aa23.81■■□□□ 1.4
HMGCL-209ENST00000513148 MYOM2P54296 1465 aa23.79■■□□□ 1.4
HMGCL-209ENST00000513148 DIP2AQ14689 1571 aa23.78■■□□□ 1.4
HMGCL-209ENST00000513148 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
HMGCL-209ENST00000513148 STRCP1A6NGW2 1772 aa23.75■■□□□ 1.39
HMGCL-209ENST00000513148 ALKQ9UM73 1620 aa23.75■■□□□ 1.39
HMGCL-209ENST00000513148 L3MBTL2Q969R5 705 aa23.75■■□□□ 1.39
HMGCL-209ENST00000513148 SETD1AO15047 1707 aaKnown RBP23.74■■□□□ 1.39
HMGCL-209ENST00000513148 TBX22Q9Y458 520 aa23.74■■□□□ 1.39
HMGCL-209ENST00000513148 NRXN1Q9ULB1 1477 aa23.74■■□□□ 1.39
HMGCL-209ENST00000513148 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
HMGCL-209ENST00000513148 CLSPNQ9HAW4 1339 aa23.72■■□□□ 1.39
HMGCL-209ENST00000513148 METP08581 1390 aa23.72■■□□□ 1.39
HMGCL-209ENST00000513148 LTBP4Q8N2S1 1624 aa23.71■■□□□ 1.39
HMGCL-209ENST00000513148 CHD2O14647 1828 aaKnown RBP23.71■■□□□ 1.39
HMGCL-209ENST00000513148 LAMC1P11047 1609 aa23.68■■□□□ 1.38
HMGCL-209ENST00000513148 NWD1Q149M9 1564 aa23.68■■□□□ 1.38
HMGCL-209ENST00000513148 CFAP70Q5T0N1 1121 aa23.67■■□□□ 1.38
HMGCL-209ENST00000513148 PTPRUQ92729 1446 aa23.67■■□□□ 1.38
HMGCL-209ENST00000513148 STAC3Q96MF2 364 aa23.66■■□□□ 1.38
HMGCL-209ENST00000513148 KCNA6P17658 529 aa23.66■■□□□ 1.38
HMGCL-209ENST00000513148 CPS1P31327 1500 aa23.65■■□□□ 1.38
HMGCL-209ENST00000513148 PIK3R4Q99570 1358 aa23.65■■□□□ 1.38
HMGCL-209ENST00000513148 ASXL1Q8IXJ9 1541 aa23.65■■□□□ 1.38
HMGCL-209ENST00000513148 PRAG1Q86YV5 1406 aa23.64■■□□□ 1.38
HMGCL-209ENST00000513148 TMEM132EQ6IEE7 984 aa23.64■■□□□ 1.38
HMGCL-209ENST00000513148 C14orf93Q9H972 538 aaKnown RBP23.64■■□□□ 1.37
HMGCL-209ENST00000513148 AMOTL2Q9Y2J4 779 aa23.63■■□□□ 1.37
HMGCL-209ENST00000513148 XRN1Q8IZH2 1706 aaKnown RBP23.63■■□□□ 1.37
HMGCL-209ENST00000513148 RBM33Q96EV2 1170 aaKnown RBP23.61■■□□□ 1.37
HMGCL-209ENST00000513148 NKTRP30414 1462 aaKnown RBP23.61■■□□□ 1.37
HMGCL-209ENST00000513148 LRRC7Q96NW7 1537 aa23.6■■□□□ 1.37
HMGCL-209ENST00000513148 STK26Q9P289 416 aa23.59■■□□□ 1.37
HMGCL-209ENST00000513148 PROSER2Q86WR7 435 aaPredicted RBP23.58■■□□□ 1.37
HMGCL-209ENST00000513148 CERKQ8TCT0 537 aa23.58■■□□□ 1.37
HMGCL-209ENST00000513148 KIAA1210Q9ULL0 1709 aa23.57■■□□□ 1.36
HMGCL-209ENST00000513148 XIRP1Q702N8 1843 aaKnown RBP23.57■■□□□ 1.36
HMGCL-209ENST00000513148 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
HMGCL-209ENST00000513148 TRPM1Q7Z4N2 1603 aa23.56■■□□□ 1.36
HMGCL-209ENST00000513148 YTHDC2Q9H6S0 1430 aaKnown RBP23.55■■□□□ 1.36
HMGCL-209ENST00000513148 NBPF8Q3BBV2 869 aa23.55■■□□□ 1.36
HMGCL-209ENST00000513148 TMEM94Q12767 1356 aa23.55■■□□□ 1.36
HMGCL-209ENST00000513148 LRPPRCP42704 1394 aaKnown RBP23.53■■□□□ 1.36
HMGCL-209ENST00000513148 KNDC1Q76NI1 1749 aa23.53■■□□□ 1.36
HMGCL-209ENST00000513148 NBPF1Q3BBV0 1214 aa23.53■■□□□ 1.36
HMGCL-209ENST00000513148 ROBO2Q9HCK4 1378 aa23.52■■□□□ 1.36
HMGCL-209ENST00000513148 PTCH1Q13635 1447 aa23.51■■□□□ 1.35
HMGCL-209ENST00000513148 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
HMGCL-209ENST00000513148 TIMELESSQ9UNS1 1208 aa23.49■■□□□ 1.35
HMGCL-209ENST00000513148 TRAK1Q9UPV9 953 aa23.49■■□□□ 1.35
HMGCL-209ENST00000513148 ROCK2O75116 1388 aaKnown RBP23.48■■□□□ 1.35
HMGCL-209ENST00000513148 ABCC11Q96J66 1382 aa23.48■■□□□ 1.35
HMGCL-209ENST00000513148 TECPR2O15040 1411 aa23.48■■□□□ 1.35
HMGCL-209ENST00000513148 IQSEC2Q5JU85 1478 aa23.47■■□□□ 1.35
HMGCL-209ENST00000513148 WAPLQ7Z5K2 1190 aa23.46■■□□□ 1.35
HMGCL-209ENST00000513148 NALCNQ8IZF0 1738 aa23.46■■□□□ 1.35
HMGCL-209ENST00000513148 PLEKHH1Q9ULM0 1364 aa23.45■■□□□ 1.34
HMGCL-209ENST00000513148 ARHGEF28Q8N1W1 1705 aaKnown RBP23.45■■□□□ 1.34
HMGCL-209ENST00000513148 RALGAPBQ86X10 1494 aa23.44■■□□□ 1.34
HMGCL-209ENST00000513148 SAFB2Q14151 953 aaKnown RBP eCLIP23.43■■□□□ 1.34
HMGCL-209ENST00000513148 MSH6P52701 1360 aa23.43■■□□□ 1.34
HMGCL-209ENST00000513148 DLC1Q96QB1 1528 aa23.43■■□□□ 1.34
HMGCL-209ENST00000513148 PRAM1Q96QH2 718 aa23.42■■□□□ 1.34
HMGCL-209ENST00000513148 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.41■■□□□ 1.34
HMGCL-209ENST00000513148 NCOA3Q9Y6Q9 1424 aa23.41■■□□□ 1.34
HMGCL-209ENST00000513148 POGKQ9P215 609 aa23.4■■□□□ 1.34
HMGCL-209ENST00000513148 FAM135BQ49AJ0 1406 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms