RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.49
PDPN-210ENST00000513143 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.48
PDPN-210ENST00000513143 IFT172Q9UG01 1749 aa18.07■□□□□ 0.48
PDPN-210ENST00000513143 RPGRIP1LQ68CZ1 1315 aa18.06■□□□□ 0.48
PDPN-210ENST00000513143 UHRF1BP1Q6BDS2 1440 aa18.05■□□□□ 0.48
PDPN-210ENST00000513143 PPLO60437 1756 aa18.05■□□□□ 0.48
PDPN-210ENST00000513143 ZNF326Q5BKZ1 582 aaKnown RBP18.05■□□□□ 0.48
PDPN-210ENST00000513143 DCAF11Q8TEB1 546 aa18.04■□□□□ 0.48
PDPN-210ENST00000513143 STAC3Q96MF2 364 aa18.04■□□□□ 0.48
PDPN-210ENST00000513143 NEXMIFQ5QGS0 1516 aa18.04■□□□□ 0.48
PDPN-210ENST00000513143 PPP1R15AO75807 674 aaPredicted RBP18.02■□□□□ 0.48
PDPN-210ENST00000513143 THEMISQ8N1K5 641 aaPredicted RBP18.02■□□□□ 0.48
PDPN-210ENST00000513143 MYOM2P54296 1465 aa18.01■□□□□ 0.47
PDPN-210ENST00000513143 TMEM2Q9UHN6 1383 aa18.01■□□□□ 0.47
PDPN-210ENST00000513143 SLIT1O75093 1534 aa18.01■□□□□ 0.47
PDPN-210ENST00000513143 KDM2AQ9Y2K7 1162 aa18■□□□□ 0.47
PDPN-210ENST00000513143 ZFYVE9O95405 1425 aa18■□□□□ 0.47
PDPN-210ENST00000513143 ARHGAP23Q9P227 1491 aa18■□□□□ 0.47
PDPN-210ENST00000513143 RIMS2Q9UQ26 1411 aa17.99■□□□□ 0.47
PDPN-210ENST00000513143 VGFO15240 615 aaPredicted RBP17.98■□□□□ 0.47
PDPN-210ENST00000513143 NRXN1Q9ULB1 1477 aa17.97■□□□□ 0.47
PDPN-210ENST00000513143 HDGFP51858 240 aaKnown RBP17.97■□□□□ 0.47
PDPN-210ENST00000513143 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.97■□□□□ 0.47
PDPN-210ENST00000513143 PRAG1Q86YV5 1406 aa17.96■□□□□ 0.47
PDPN-210ENST00000513143 ADGRF5Q8IZF2 1346 aa17.95■□□□□ 0.46
PDPN-210ENST00000513143 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
PDPN-210ENST00000513143 NBPF8Q3BBV2 869 aa17.95■□□□□ 0.46
PDPN-210ENST00000513143 NUTM2DQ5VT03 806 aaPredicted RBP17.94■□□□□ 0.46
PDPN-210ENST00000513143 LTKP29376 864 aa17.93■□□□□ 0.46
PDPN-210ENST00000513143 EID1Q9Y6B2 187 aa17.93■□□□□ 0.46
PDPN-210ENST00000513143 TXNDC2Q86VQ3 553 aa17.92■□□□□ 0.46
PDPN-210ENST00000513143 PIK3C2GO75747 1445 aa17.92■□□□□ 0.46
PDPN-210ENST00000513143 KIAA1210Q9ULL0 1709 aa17.91■□□□□ 0.46
PDPN-210ENST00000513143 SCAF11Q99590 1463 aaKnown RBP17.91■□□□□ 0.46
PDPN-210ENST00000513143 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
PDPN-210ENST00000513143 ANKLE2Q86XL3 938 aa17.9■□□□□ 0.46
PDPN-210ENST00000513143 POLR1AO95602 1720 aaPredicted RBP17.89■□□□□ 0.46
PDPN-210ENST00000513143 PLEKHG1Q9ULL1 1385 aa17.89■□□□□ 0.45
PDPN-210ENST00000513143 SETBP1Q9Y6X0 1596 aa17.88■□□□□ 0.45
PDPN-210ENST00000513143 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
PDPN-210ENST00000513143 LAMC1P11047 1609 aa17.87■□□□□ 0.45
PDPN-210ENST00000513143 NRXN3Q9Y4C0 1643 aa17.87■□□□□ 0.45
PDPN-210ENST00000513143 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
PDPN-210ENST00000513143 HSPA2P54652 639 aa17.86■□□□□ 0.45
PDPN-210ENST00000513143 IQGAP1P46940 1657 aa17.86■□□□□ 0.45
PDPN-210ENST00000513143 MED14O60244 1454 aa17.85■□□□□ 0.45
PDPN-210ENST00000513143 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
PDPN-210ENST00000513143 ALKQ9UM73 1620 aa17.85■□□□□ 0.45
PDPN-210ENST00000513143 SETD1AO15047 1707 aaKnown RBP17.85■□□□□ 0.45
PDPN-210ENST00000513143 NCKAP5LQ9HCH0 1330 aa17.83■□□□□ 0.45
PDPN-210ENST00000513143 NBPF1Q3BBV0 1214 aa17.83■□□□□ 0.44
PDPN-210ENST00000513143 GPRASP1Q5JY77 1395 aa17.83■□□□□ 0.44
PDPN-210ENST00000513143 ADAMTS13Q76LX8 1427 aa17.82■□□□□ 0.44
PDPN-210ENST00000513143 STRCQ7RTU9 1775 aa17.82■□□□□ 0.44
PDPN-210ENST00000513143 ROCK2O75116 1388 aaKnown RBP17.82■□□□□ 0.44
PDPN-210ENST00000513143 NPHP4O75161 1426 aaPredicted RBP17.81■□□□□ 0.44
PDPN-210ENST00000513143 ADGRB1O14514 1584 aa17.81■□□□□ 0.44
PDPN-210ENST00000513143 DIP2AQ14689 1571 aa17.81■□□□□ 0.44
PDPN-210ENST00000513143 BCANQ96GW7 911 aa17.8■□□□□ 0.44
PDPN-210ENST00000513143 TBX22Q9Y458 520 aa17.79■□□□□ 0.44
PDPN-210ENST00000513143 CARD11Q9BXL7 1154 aa17.78■□□□□ 0.44
PDPN-210ENST00000513143 ASXL1Q8IXJ9 1541 aa17.78■□□□□ 0.44
PDPN-210ENST00000513143 TMEM132EQ6IEE7 984 aa17.76■□□□□ 0.43
PDPN-210ENST00000513143 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
PDPN-210ENST00000513143 SLC26A8Q96RN1 970 aa17.76■□□□□ 0.43
PDPN-210ENST00000513143 METP08581 1390 aa17.76■□□□□ 0.43
PDPN-210ENST00000513143 PIK3R4Q99570 1358 aa17.74■□□□□ 0.43
PDPN-210ENST00000513143 YTHDC2Q9H6S0 1430 aaKnown RBP17.73■□□□□ 0.43
PDPN-210ENST00000513143 CHD2O14647 1828 aaKnown RBP17.71■□□□□ 0.43
PDPN-210ENST00000513143 LRPPRCP42704 1394 aaKnown RBP17.71■□□□□ 0.43
PDPN-210ENST00000513143 USP47Q96K76 1375 aa17.71■□□□□ 0.43
PDPN-210ENST00000513143 KNDC1Q76NI1 1749 aa17.71■□□□□ 0.43
PDPN-210ENST00000513143 EIF4G2P78344 907 aaKnown RBP eCLIP17.71■□□□□ 0.42
PDPN-210ENST00000513143 ABCC11Q96J66 1382 aa17.7■□□□□ 0.42
PDPN-210ENST00000513143 PTPRUQ92729 1446 aa17.69■□□□□ 0.42
PDPN-210ENST00000513143 ARHGEF28Q8N1W1 1705 aaKnown RBP17.69■□□□□ 0.42
PDPN-210ENST00000513143 TRAK1Q9UPV9 953 aa17.69■□□□□ 0.42
PDPN-210ENST00000513143 TECPR2O15040 1411 aa17.68■□□□□ 0.42
PDPN-210ENST00000513143 HSPA5P11021 654 aaKnown RBP17.68■□□□□ 0.42
PDPN-210ENST00000513143 STK26Q9P289 416 aa17.68■□□□□ 0.42
PDPN-210ENST00000513143 DLC1Q96QB1 1528 aa17.68■□□□□ 0.42
PDPN-210ENST00000513143 XRN1Q8IZH2 1706 aaKnown RBP17.67■□□□□ 0.42
PDPN-210ENST00000513143 EIF3AQ14152 1382 aaKnown RBP17.67■□□□□ 0.42
PDPN-210ENST00000513143 CPS1P31327 1500 aa17.66■□□□□ 0.42
PDPN-210ENST00000513143 SIRT1Q96EB6 747 aa17.66■□□□□ 0.42
PDPN-210ENST00000513143 AMOTL2Q9Y2J4 779 aa17.66■□□□□ 0.42
PDPN-210ENST00000513143 ST20-MTHFSA0A0A6YYL1 179 aa17.65■□□□□ 0.42
PDPN-210ENST00000513143 NWD1Q149M9 1564 aa17.64■□□□□ 0.42
PDPN-210ENST00000513143 KCNA6P17658 529 aa17.64■□□□□ 0.41
PDPN-210ENST00000513143 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
PDPN-210ENST00000513143 PTCH1Q13635 1447 aa17.62■□□□□ 0.41
PDPN-210ENST00000513143 ROBO2Q9HCK4 1378 aa17.62■□□□□ 0.41
PDPN-210ENST00000513143 QRICH2Q9H0J4 1663 aa17.62■□□□□ 0.41
PDPN-210ENST00000513143 STRCP1A6NGW2 1772 aa17.61■□□□□ 0.41
PDPN-210ENST00000513143 CENPJQ9HC77 1338 aaPredicted RBP17.61■□□□□ 0.41
PDPN-210ENST00000513143 PRAM1Q96QH2 718 aa17.61■□□□□ 0.41
PDPN-210ENST00000513143 HIRIP3Q9BW71 556 aaPredicted RBP17.61■□□□□ 0.41
PDPN-210ENST00000513143 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
PDPN-210ENST00000513143 TESK2Q96S53 571 aa17.6■□□□□ 0.41
PDPN-210ENST00000513143 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms