RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 NEURL4Q96JN8 1562 aa18.7■□□□□ 0.58
CDK7-209ENST00000512985 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
CDK7-209ENST00000512985 BCANQ96GW7 911 aa18.69■□□□□ 0.58
CDK7-209ENST00000512985 LTKP29376 864 aa18.68■□□□□ 0.58
CDK7-209ENST00000512985 RPGRIP1LQ68CZ1 1315 aa18.68■□□□□ 0.58
CDK7-209ENST00000512985 MYO5BQ9ULV0 1848 aa18.67■□□□□ 0.58
CDK7-209ENST00000512985 ZFYVE9O95405 1425 aa18.67■□□□□ 0.58
CDK7-209ENST00000512985 ANKRD30BQ9BXX2 1392 aa18.65■□□□□ 0.58
CDK7-209ENST00000512985 PLEKHG1Q9ULL1 1385 aa18.65■□□□□ 0.58
CDK7-209ENST00000512985 VGFO15240 615 aaPredicted RBP18.64■□□□□ 0.57
CDK7-209ENST00000512985 RGL3Q3MIN7 710 aa18.59■□□□□ 0.57
CDK7-209ENST00000512985 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
CDK7-209ENST00000512985 DIP2AQ14689 1571 aa18.59■□□□□ 0.57
CDK7-209ENST00000512985 NEXMIFQ5QGS0 1516 aa18.59■□□□□ 0.57
CDK7-209ENST00000512985 SPATA31E1Q6ZUB1 1445 aa18.58■□□□□ 0.57
CDK7-209ENST00000512985 NUTM2DQ5VT03 806 aaPredicted RBP18.58■□□□□ 0.56
CDK7-209ENST00000512985 ZNF335Q9H4Z2 1342 aaPredicted RBP18.57■□□□□ 0.56
CDK7-209ENST00000512985 TBX22Q9Y458 520 aa18.57■□□□□ 0.56
CDK7-209ENST00000512985 CPS1P31327 1500 aa18.57■□□□□ 0.56
CDK7-209ENST00000512985 STAC3Q96MF2 364 aa18.56■□□□□ 0.56
CDK7-209ENST00000512985 SLC26A8Q96RN1 970 aa18.56■□□□□ 0.56
CDK7-209ENST00000512985 CERKQ8TCT0 537 aa18.54■□□□□ 0.56
CDK7-209ENST00000512985 SETBP1Q9Y6X0 1596 aa18.54■□□□□ 0.56
CDK7-209ENST00000512985 PIK3R4Q99570 1358 aa18.54■□□□□ 0.56
CDK7-209ENST00000512985 PPLO60437 1756 aa18.53■□□□□ 0.56
CDK7-209ENST00000512985 DHX57Q6P158 1386 aaKnown RBP18.53■□□□□ 0.56
CDK7-209ENST00000512985 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.56
CDK7-209ENST00000512985 LTBP4Q8N2S1 1624 aa18.52■□□□□ 0.55
CDK7-209ENST00000512985 KCNA6P17658 529 aa18.51■□□□□ 0.55
CDK7-209ENST00000512985 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
CDK7-209ENST00000512985 ADAMTS13Q76LX8 1427 aa18.49■□□□□ 0.55
CDK7-209ENST00000512985 IFT172Q9UG01 1749 aa18.49■□□□□ 0.55
CDK7-209ENST00000512985 MYOM2P54296 1465 aa18.48■□□□□ 0.55
CDK7-209ENST00000512985 NKTRP30414 1462 aaKnown RBP18.47■□□□□ 0.55
CDK7-209ENST00000512985 DCAF11Q8TEB1 546 aa18.46■□□□□ 0.55
CDK7-209ENST00000512985 NWD1Q149M9 1564 aa18.45■□□□□ 0.54
CDK7-209ENST00000512985 ADGRF5Q8IZF2 1346 aa18.45■□□□□ 0.54
CDK7-209ENST00000512985 NRXN3Q9Y4C0 1643 aa18.45■□□□□ 0.54
CDK7-209ENST00000512985 PROSER2Q86WR7 435 aaPredicted RBP18.44■□□□□ 0.54
CDK7-209ENST00000512985 PIK3C2GO75747 1445 aa18.43■□□□□ 0.54
CDK7-209ENST00000512985 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
CDK7-209ENST00000512985 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
CDK7-209ENST00000512985 CHD2O14647 1828 aaKnown RBP18.43■□□□□ 0.54
CDK7-209ENST00000512985 AMOTL2Q9Y2J4 779 aa18.42■□□□□ 0.54
CDK7-209ENST00000512985 KDM2AQ9Y2K7 1162 aa18.42■□□□□ 0.54
CDK7-209ENST00000512985 CLSPNQ9HAW4 1339 aa18.42■□□□□ 0.54
CDK7-209ENST00000512985 LAMC1P11047 1609 aa18.41■□□□□ 0.54
CDK7-209ENST00000512985 LRRC7Q96NW7 1537 aa18.41■□□□□ 0.54
CDK7-209ENST00000512985 NRXN1Q9ULB1 1477 aa18.4■□□□□ 0.54
CDK7-209ENST00000512985 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
CDK7-209ENST00000512985 FBXO41Q8TF61 875 aa18.4■□□□□ 0.54
CDK7-209ENST00000512985 METP08581 1390 aa18.4■□□□□ 0.54
CDK7-209ENST00000512985 NCOA3Q9Y6Q9 1424 aa18.4■□□□□ 0.54
CDK7-209ENST00000512985 TOM1O60784 492 aa18.38■□□□□ 0.53
CDK7-209ENST00000512985 SIN3AQ96ST3 1273 aa18.38■□□□□ 0.53
CDK7-209ENST00000512985 C14orf93Q9H972 538 aaKnown RBP18.38■□□□□ 0.53
CDK7-209ENST00000512985 C14orf37Q86TY3 774 aa18.37■□□□□ 0.53
CDK7-209ENST00000512985 TMEM94Q12767 1356 aa18.37■□□□□ 0.53
CDK7-209ENST00000512985 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
CDK7-209ENST00000512985 SETD1AO15047 1707 aaKnown RBP18.35■□□□□ 0.53
CDK7-209ENST00000512985 XRN1Q8IZH2 1706 aaKnown RBP18.35■□□□□ 0.53
CDK7-209ENST00000512985 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
CDK7-209ENST00000512985 MSH6P52701 1360 aa18.35■□□□□ 0.53
CDK7-209ENST00000512985 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
CDK7-209ENST00000512985 PTCH1Q13635 1447 aa18.34■□□□□ 0.53
CDK7-209ENST00000512985 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
CDK7-209ENST00000512985 CFAP70Q5T0N1 1121 aa18.33■□□□□ 0.52
CDK7-209ENST00000512985 L3MBTL2Q969R5 705 aa18.33■□□□□ 0.52
CDK7-209ENST00000512985 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
CDK7-209ENST00000512985 LRPPRCP42704 1394 aaKnown RBP18.32■□□□□ 0.52
CDK7-209ENST00000512985 C19orf44Q9H6X5 657 aa18.31■□□□□ 0.52
CDK7-209ENST00000512985 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
CDK7-209ENST00000512985 YTHDC2Q9H6S0 1430 aaKnown RBP18.3■□□□□ 0.52
CDK7-209ENST00000512985 ATF3P18847 181 aa18.29■□□□□ 0.52
CDK7-209ENST00000512985 TMEM132EQ6IEE7 984 aa18.29■□□□□ 0.52
CDK7-209ENST00000512985 CADPS2Q86UW7 1296 aa18.29■□□□□ 0.52
CDK7-209ENST00000512985 STK26Q9P289 416 aa18.29■□□□□ 0.52
CDK7-209ENST00000512985 TIMELESSQ9UNS1 1208 aa18.29■□□□□ 0.52
CDK7-209ENST00000512985 TECPR2O15040 1411 aa18.29■□□□□ 0.52
CDK7-209ENST00000512985 KIAA1210Q9ULL0 1709 aa18.29■□□□□ 0.52
CDK7-209ENST00000512985 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
CDK7-209ENST00000512985 KNDC1Q76NI1 1749 aa18.27■□□□□ 0.52
CDK7-209ENST00000512985 DCCP43146 1447 aa18.27■□□□□ 0.52
CDK7-209ENST00000512985 RBM33Q96EV2 1170 aaKnown RBP18.27■□□□□ 0.52
CDK7-209ENST00000512985 XIRP1Q702N8 1843 aaKnown RBP18.27■□□□□ 0.52
CDK7-209ENST00000512985 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
CDK7-209ENST00000512985 FAM135BQ49AJ0 1406 aa18.25■□□□□ 0.51
CDK7-209ENST00000512985 ASXL1Q8IXJ9 1541 aa18.25■□□□□ 0.51
CDK7-209ENST00000512985 ROBO2Q9HCK4 1378 aa18.25■□□□□ 0.51
CDK7-209ENST00000512985 ADGRL3Q9HAR2 1447 aa18.24■□□□□ 0.51
CDK7-209ENST00000512985 POGKQ9P215 609 aa18.24■□□□□ 0.51
CDK7-209ENST00000512985 DLC1Q96QB1 1528 aa18.23■□□□□ 0.51
CDK7-209ENST00000512985 ADGRB1O14514 1584 aa18.23■□□□□ 0.51
CDK7-209ENST00000512985 PIP4K2BP78356 416 aa18.23■□□□□ 0.51
CDK7-209ENST00000512985 ILDR1Q86SU0 546 aaPredicted RBP18.23■□□□□ 0.51
CDK7-209ENST00000512985 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
CDK7-209ENST00000512985 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.2■□□□□ 0.5
CDK7-209ENST00000512985 ROCK2O75116 1388 aaKnown RBP18.2■□□□□ 0.5
CDK7-209ENST00000512985 SLAIN2Q9P270 581 aa18.2■□□□□ 0.5
CDK7-209ENST00000512985 PRAM1Q96QH2 718 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms