RNA–Protein interactions for RNA: ENST00000512959.1

KIT-203, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

TSL 4

Gene KIT, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-203ENST00000512959 TMEM134Q9H6X4 195 aa12.35□□□□□ -0.43
KIT-203ENST00000512959 KRTAP3-3Q9BYR6 98 aa12.34□□□□□ -0.43
KIT-203ENST00000512959 KRTAP3-2Q9BYR7 98 aa12.34□□□□□ -0.43
KIT-203ENST00000512959 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
KIT-203ENST00000512959 FAM98CQ17RN3 349 aaKnown RBP12.33□□□□□ -0.44
KIT-203ENST00000512959 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
KIT-203ENST00000512959 BHMG1C9JSJ3 638 aaPredicted RBP12.32□□□□□ -0.44
KIT-203ENST00000512959 MMRN1Q13201 1228 aa12.32□□□□□ -0.44
KIT-203ENST00000512959 SWT1Q5T5J6 900 aaKnown RBP12.32□□□□□ -0.44
KIT-203ENST00000512959 DDX11L8A8MPP1 907 aa12.31□□□□□ -0.44
KIT-203ENST00000512959 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
KIT-203ENST00000512959 DDRGK1Q96HY6 314 aa12.31□□□□□ -0.44
KIT-203ENST00000512959 HRO43593 1189 aa12.3□□□□□ -0.44
KIT-203ENST00000512959 RNF40O75150 1001 aa12.29□□□□□ -0.44
KIT-203ENST00000512959 SAMD7Q7Z3H4 446 aa12.29□□□□□ -0.44
KIT-203ENST00000512959 BEGAINQ9BUH8 593 aa12.29□□□□□ -0.44
KIT-203ENST00000512959 RDH13Q8NBN7 331 aa12.28□□□□□ -0.44
KIT-203ENST00000512959 LAPTM4BQ86VI4 370 aa12.27□□□□□ -0.45
KIT-203ENST00000512959 ZFRQ96KR1 1074 aaKnown RBP12.27□□□□□ -0.45
KIT-203ENST00000512959 STAC3Q96MF2 364 aa12.26□□□□□ -0.45
KIT-203ENST00000512959 SULF1Q8IWU6 871 aa12.25□□□□□ -0.45
KIT-203ENST00000512959 CD46P15529 392 aa12.24□□□□□ -0.45
KIT-203ENST00000512959 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
KIT-203ENST00000512959 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
KIT-203ENST00000512959 SLC10A3P09131 477 aa12.21□□□□□ -0.45
KIT-203ENST00000512959 LRCH3Q96II8 777 aa12.21□□□□□ -0.45
KIT-203ENST00000512959 SLF2Q8IX21 1173 aa12.2□□□□□ -0.46
KIT-203ENST00000512959 BCAMP50895 628 aa12.19□□□□□ -0.46
KIT-203ENST00000512959 ANKK1Q8NFD2 765 aa12.19□□□□□ -0.46
KIT-203ENST00000512959 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.19□□□□□ -0.46
KIT-203ENST00000512959 SLC4A3P48751 1232 aa12.18□□□□□ -0.46
KIT-203ENST00000512959 WNT2BQ93097 391 aa12.18□□□□□ -0.46
KIT-203ENST00000512959 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
KIT-203ENST00000512959 CFHP08603 1231 aa12.16□□□□□ -0.46
KIT-203ENST00000512959 SH3D19Q5HYK7 790 aa12.15□□□□□ -0.46
KIT-203ENST00000512959 RSPH4AQ5TD94 716 aa12.15□□□□□ -0.46
KIT-203ENST00000512959 MYSM1Q5VVJ2 828 aa12.15□□□□□ -0.46
KIT-203ENST00000512959 NUTM1Q86Y26 1132 aa12.15□□□□□ -0.46
KIT-203ENST00000512959 SPIRE2Q8WWL2 714 aa12.15□□□□□ -0.46
KIT-203ENST00000512959 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
KIT-203ENST00000512959 GCGRP47871 477 aa12.13□□□□□ -0.47
KIT-203ENST00000512959 ATP1B4Q9UN42 357 aaPredicted RBP12.13□□□□□ -0.47
KIT-203ENST00000512959 HPS5Q9UPZ3 1129 aa12.13□□□□□ -0.47
KIT-203ENST00000512959 GTF3C3Q9Y5Q9 886 aa12.13□□□□□ -0.47
KIT-203ENST00000512959 SOWAHBA6NEL2 793 aa12.12□□□□□ -0.47
KIT-203ENST00000512959 KCTD12Q96CX2 325 aaKnown RBP12.12□□□□□ -0.47
KIT-203ENST00000512959 RSPH6AQ9H0K4 717 aa12.12□□□□□ -0.47
KIT-203ENST00000512959 KDM4AO75164 1064 aa12.11□□□□□ -0.47
KIT-203ENST00000512959 NDUFV2P19404 249 aa12.1□□□□□ -0.47
KIT-203ENST00000512959 CLK2P49760 499 aaKnown RBP12.1□□□□□ -0.47
KIT-203ENST00000512959 HLA-CQ95604 372 aa12.1□□□□□ -0.47
KIT-203ENST00000512959 PCMTD1Q96MG8 357 aaPredicted RBP12.1□□□□□ -0.47
KIT-203ENST00000512959 MOXD2PA6NHM9 499 aa12.09□□□□□ -0.47
KIT-203ENST00000512959 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
KIT-203ENST00000512959 PROCA1Q8NCQ7 364 aaPredicted RBP12.09□□□□□ -0.47
KIT-203ENST00000512959 LIMD1Q9UGP4 676 aa12.09□□□□□ -0.47
KIT-203ENST00000512959 GOPCQ9HD26 462 aa12.08□□□□□ -0.48
KIT-203ENST00000512959 HOXA2O43364 376 aa12.07□□□□□ -0.48
KIT-203ENST00000512959 PPP4CP60510 307 aa12.07□□□□□ -0.48
KIT-203ENST00000512959 GUCA2AQ02747 115 aa12.07□□□□□ -0.48
KIT-203ENST00000512959 FUT2Q10981 343 aa12.07□□□□□ -0.48
KIT-203ENST00000512959 DIXDC1Q155Q3 683 aa12.07□□□□□ -0.48
KIT-203ENST00000512959 CSPP1Q1MSJ5 1256 aa12.07□□□□□ -0.48
KIT-203ENST00000512959 RIC3Q7Z5B4 369 aa12.07□□□□□ -0.48
KIT-203ENST00000512959 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
KIT-203ENST00000512959 RSBN1LQ6PCB5 846 aaPredicted RBP12.06□□□□□ -0.48
KIT-203ENST00000512959 THSD4Q6ZMP0 1018 aa12.06□□□□□ -0.48
KIT-203ENST00000512959 TSR3Q9UJK0 312 aaKnown RBP12.06□□□□□ -0.48
KIT-203ENST00000512959 WBP1LQ9NX94 342 aa12.05□□□□□ -0.48
KIT-203ENST00000512959 APLP1P51693 650 aa12.04□□□□□ -0.48
KIT-203ENST00000512959 USP46P62068 366 aa12.04□□□□□ -0.48
KIT-203ENST00000512959 PUS10Q3MIT2 529 aaKnown RBP12.03□□□□□ -0.48
KIT-203ENST00000512959 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
KIT-203ENST00000512959 SPTLC1O15269 473 aa12.02□□□□□ -0.49
KIT-203ENST00000512959 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
KIT-203ENST00000512959 PTPN5P54829 565 aa12.01□□□□□ -0.49
KIT-203ENST00000512959 FBXO31Q5XUX0 539 aaPredicted RBP12.01□□□□□ -0.49
KIT-203ENST00000512959 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
KIT-203ENST00000512959 ACTN4O43707 911 aaKnown RBP12□□□□□ -0.49
KIT-203ENST00000512959 FDX1P10109 184 aa12□□□□□ -0.49
KIT-203ENST00000512959 GNL3Q9BVP2 549 aaKnown RBP eCLIP12□□□□□ -0.49
KIT-203ENST00000512959 QPCTQ16769 361 aa11.99□□□□□ -0.49
KIT-203ENST00000512959 PCDHGC3Q9UN70 934 aa11.99□□□□□ -0.49
KIT-203ENST00000512959 ATP6V1AP38606 617 aa11.98□□□□□ -0.49
KIT-203ENST00000512959 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
KIT-203ENST00000512959 GRIPAP1Q4V328 841 aa11.97□□□□□ -0.49
KIT-203ENST00000512959 PRR14Q9BWN1 585 aa11.97□□□□□ -0.49
KIT-203ENST00000512959 MORN1Q5T089 497 aa11.96□□□□□ -0.49
KIT-203ENST00000512959 PCDHB3Q9Y5E6 796 aa11.96□□□□□ -0.49
KIT-203ENST00000512959 GJA5P36382 358 aa11.94□□□□□ -0.5
KIT-203ENST00000512959 BLOC1S3Q6QNY0 202 aa11.94□□□□□ -0.5
KIT-203ENST00000512959 TUSC1Q2TAM9 212 aa11.93□□□□□ -0.5
KIT-203ENST00000512959 SYMPKQ92797 1274 aaKnown RBP11.93□□□□□ -0.5
KIT-203ENST00000512959 SLC27A5Q9Y2P5 690 aa11.93□□□□□ -0.5
KIT-203ENST00000512959 NUTM2BA6NNL0 878 aaPredicted RBP11.92□□□□□ -0.5
KIT-203ENST00000512959 NUTM2EB1AL46 878 aaPredicted RBP11.92□□□□□ -0.5
KIT-203ENST00000512959 C6orf229H3BNL8 230 aa11.92□□□□□ -0.5
KIT-203ENST00000512959 LILRB3O75022 631 aa11.92□□□□□ -0.5
KIT-203ENST00000512959 HRCP23327 699 aa11.92□□□□□ -0.5
KIT-203ENST00000512959 RFC5P40937 340 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms