RNA–Protein interactions for RNA: ENST00000512959.1

KIT-203, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

TSL 4

Gene KIT, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-203ENST00000512959 AEBP2Q6ZN18 517 aaPredicted RBP28.41■■■□□ 2.14
KIT-203ENST00000512959 CHIC1Q5VXU3 224 aa27.95■■■□□ 2.06
KIT-203ENST00000512959 PHF23Q9BUL5 403 aaPredicted RBP24.65■■□□□ 1.54
KIT-203ENST00000512959 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
KIT-203ENST00000512959 PLPPR3Q6T4P5 718 aa22.8■■□□□ 1.24
KIT-203ENST00000512959 FOXD1Q16676 465 aa22.27■■□□□ 1.16
KIT-203ENST00000512959 ADRA2BP18089 450 aa21.69■■□□□ 1.06
KIT-203ENST00000512959 PPP6R1Q9UPN7 881 aa21.67■■□□□ 1.06
KIT-203ENST00000512959 PIAS4Q8N2W9 510 aaPredicted RBP21.09■□□□□ 0.97
KIT-203ENST00000512959 MSH5O43196 834 aa20.63■□□□□ 0.89
KIT-203ENST00000512959 POTEDQ86YR6 584 aa20.21■□□□□ 0.83
KIT-203ENST00000512959 PPP4R3CPQ6ZMV5 832 aa20.17■□□□□ 0.82
KIT-203ENST00000512959 KCNA4P22459 653 aa20.06■□□□□ 0.8
KIT-203ENST00000512959 SCAF1Q9H7N4 1312 aaKnown RBP19.71■□□□□ 0.75
KIT-203ENST00000512959 NCBP3Q53F19 620 aaKnown RBP19.66■□□□□ 0.74
KIT-203ENST00000512959 MAPK8IP2Q13387 824 aaPredicted RBP19.6■□□□□ 0.73
KIT-203ENST00000512959 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
KIT-203ENST00000512959 NPM3O75607 178 aaKnown RBP19.45■□□□□ 0.7
KIT-203ENST00000512959 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
KIT-203ENST00000512959 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
KIT-203ENST00000512959 RNF216Q9NWF9 866 aaPredicted RBP19.04■□□□□ 0.64
KIT-203ENST00000512959 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
KIT-203ENST00000512959 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
KIT-203ENST00000512959 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
KIT-203ENST00000512959 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
KIT-203ENST00000512959 ZBTB22O15209 634 aa18.49■□□□□ 0.55
KIT-203ENST00000512959 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
KIT-203ENST00000512959 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
KIT-203ENST00000512959 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
KIT-203ENST00000512959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.05■□□□□ 0.48
KIT-203ENST00000512959 MYCNP04198 464 aaPredicted RBP17.93■□□□□ 0.46
KIT-203ENST00000512959 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
KIT-203ENST00000512959 CACNB1Q02641 598 aaPredicted RBP17.72■□□□□ 0.43
KIT-203ENST00000512959 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
KIT-203ENST00000512959 ATXN8OSP0DMR3 200 aa17.58■□□□□ 0.4
KIT-203ENST00000512959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
KIT-203ENST00000512959 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
KIT-203ENST00000512959 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
KIT-203ENST00000512959 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
KIT-203ENST00000512959 C1QBPQ07021 282 aaKnown RBP17.36■□□□□ 0.37
KIT-203ENST00000512959 APLP2Q06481 763 aa17.32■□□□□ 0.36
KIT-203ENST00000512959 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.36
KIT-203ENST00000512959 CAPN15O75808 1086 aa17.17■□□□□ 0.34
KIT-203ENST00000512959 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
KIT-203ENST00000512959 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
KIT-203ENST00000512959 ABCB7O75027 752 aa16.93■□□□□ 0.3
KIT-203ENST00000512959 POLA2Q14181 598 aa16.9■□□□□ 0.3
KIT-203ENST00000512959 FKBP8Q14318 412 aa16.81■□□□□ 0.28
KIT-203ENST00000512959 DSG3P32926 999 aa16.77■□□□□ 0.28
KIT-203ENST00000512959 MKRN4PQ13434 485 aaPredicted RBP16.74■□□□□ 0.27
KIT-203ENST00000512959 FBLN2P98095 1184 aa16.68■□□□□ 0.26
KIT-203ENST00000512959 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
KIT-203ENST00000512959 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
KIT-203ENST00000512959 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
KIT-203ENST00000512959 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
KIT-203ENST00000512959 PROM2Q8N271 834 aa16.18■□□□□ 0.18
KIT-203ENST00000512959 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
KIT-203ENST00000512959 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
KIT-203ENST00000512959 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
KIT-203ENST00000512959 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
KIT-203ENST00000512959 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
KIT-203ENST00000512959 FBXO3Q9UK99 471 aa16.01■□□□□ 0.15
KIT-203ENST00000512959 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
KIT-203ENST00000512959 VASPP50552 380 aaPredicted RBP15.87■□□□□ 0.13
KIT-203ENST00000512959 POTEHQ6S545 545 aa15.82■□□□□ 0.12
KIT-203ENST00000512959 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
KIT-203ENST00000512959 RTN4Q9NQC3 1192 aaKnown RBP15.79■□□□□ 0.12
KIT-203ENST00000512959 AMER1Q5JTC6 1135 aaPredicted RBP15.74■□□□□ 0.11
KIT-203ENST00000512959 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
KIT-203ENST00000512959 IFNLR1Q8IU57 520 aaPredicted RBP15.68■□□□□ 0.1
KIT-203ENST00000512959 REM2Q8IYK8 340 aaPredicted RBP15.68■□□□□ 0.1
KIT-203ENST00000512959 SPDYE1Q8NFV5 336 aaPredicted RBP15.64■□□□□ 0.09
KIT-203ENST00000512959 CLEC11AQ9Y240 323 aa15.64■□□□□ 0.09
KIT-203ENST00000512959 PLCD3Q8N3E9 789 aa15.62■□□□□ 0.09
KIT-203ENST00000512959 MIER1Q8N108 512 aa15.58■□□□□ 0.08
KIT-203ENST00000512959 KLHL34Q8N239 644 aa15.55■□□□□ 0.08
KIT-203ENST00000512959 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
KIT-203ENST00000512959 PRR29P0C7W0 189 aa15.48■□□□□ 0.07
KIT-203ENST00000512959 PLEKHG5O94827 1062 aa15.44■□□□□ 0.06
KIT-203ENST00000512959 SPOCK2Q92563 424 aa15.42■□□□□ 0.06
KIT-203ENST00000512959 CHRDL2Q6WN34 429 aa15.41■□□□□ 0.06
KIT-203ENST00000512959 CREBZFQ9NS37 354 aa15.37■□□□□ 0.05
KIT-203ENST00000512959 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
KIT-203ENST00000512959 PKD2Q13563 968 aa15.26■□□□□ 0.03
KIT-203ENST00000512959 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
KIT-203ENST00000512959 MNX1P50219 401 aaPredicted RBP15.22■□□□□ 0.03
KIT-203ENST00000512959 CIZ1Q9ULV3 898 aaPredicted RBP15.19■□□□□ 0.02
KIT-203ENST00000512959 NUBP1P53384 320 aa15.15■□□□□ 0.02
KIT-203ENST00000512959 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
KIT-203ENST00000512959 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
KIT-203ENST00000512959 FXR2P51116 673 aaKnown RBP eCLIP15.13■□□□□ 0.01
KIT-203ENST00000512959 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
KIT-203ENST00000512959 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
KIT-203ENST00000512959 RASEFQ8IZ41 740 aa15.07■□□□□ 0
KIT-203ENST00000512959 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
KIT-203ENST00000512959 FARP1Q9Y4F1 1045 aaPredicted RBP15.06■□□□□ 0
KIT-203ENST00000512959 DCAF8Q5TAQ9 597 aa15.05■□□□□ -0
KIT-203ENST00000512959 FAM212AQ96EL1 285 aa15.03■□□□□ -0
KIT-203ENST00000512959 GSE1Q14687 1217 aa15.02■□□□□ -0
KIT-203ENST00000512959 RGL2O15211 777 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms