RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ZNF687Q8N1G0 1237 aa8.31□□□□□ -1.08
HTT-210ENST00000512909 PHOX2BQ99453 314 aa8.31□□□□□ -1.08
HTT-210ENST00000512909 RABGEF1Q9UJ41 708 aa8.31□□□□□ -1.08
HTT-210ENST00000512909 RNF40O75150 1001 aa8.3□□□□□ -1.08
HTT-210ENST00000512909 EYA1Q99502 592 aa8.3□□□□□ -1.08
HTT-210ENST00000512909 REPIN1Q9BWE0 567 aaKnown RBP8.3□□□□□ -1.08
HTT-210ENST00000512909 FAM198AQ9UFP1 575 aa8.3□□□□□ -1.08
HTT-210ENST00000512909 PLEKHG3A1L390 1219 aa8.28□□□□□ -1.08
HTT-210ENST00000512909 MRPL50Q8N5N7 158 aaKnown RBP8.28□□□□□ -1.08
HTT-210ENST00000512909 HS3ST6Q96QI5 342 aa8.28□□□□□ -1.08
HTT-210ENST00000512909 SLC4A5Q9BY07 1137 aa8.28□□□□□ -1.08
HTT-210ENST00000512909 SEPT9Q9UHD8 586 aaPredicted RBP8.28□□□□□ -1.08
HTT-210ENST00000512909 SH3D19Q5HYK7 790 aa8.27□□□□□ -1.09
HTT-210ENST00000512909 SLF2Q8IX21 1173 aa8.27□□□□□ -1.09
HTT-210ENST00000512909 NECTIN2Q92692 538 aa8.27□□□□□ -1.09
HTT-210ENST00000512909 TMUB1Q9BVT8 246 aa8.27□□□□□ -1.09
HTT-210ENST00000512909 TMEM134Q9H6X4 195 aa8.27□□□□□ -1.09
HTT-210ENST00000512909 GOPCQ9HD26 462 aa8.27□□□□□ -1.09
HTT-210ENST00000512909 SKIV2LQ15477 1246 aaKnown RBP8.26□□□□□ -1.09
HTT-210ENST00000512909 FAM98CQ17RN3 349 aaKnown RBP8.26□□□□□ -1.09
HTT-210ENST00000512909 DMRTA1Q5VZB9 504 aa8.26□□□□□ -1.09
HTT-210ENST00000512909 POLR3EQ9NVU0 708 aa8.26□□□□□ -1.09
HTT-210ENST00000512909 LAPTM4BQ86VI4 370 aa8.25□□□□□ -1.09
HTT-210ENST00000512909 TK2O00142 265 aa8.24□□□□□ -1.09
HTT-210ENST00000512909 SWT1Q5T5J6 900 aaKnown RBP8.24□□□□□ -1.09
HTT-210ENST00000512909 ANKRD13DQ6ZTN6 518 aa8.24□□□□□ -1.09
HTT-210ENST00000512909 TBC1D2Q9BYX2 928 aa8.24□□□□□ -1.09
HTT-210ENST00000512909 VPS9D1Q9Y2B5 631 aa8.24□□□□□ -1.09
HTT-210ENST00000512909 CLK2P49760 499 aaKnown RBP8.23□□□□□ -1.09
HTT-210ENST00000512909 GRIPAP1Q4V328 841 aa8.23□□□□□ -1.09
HTT-210ENST00000512909 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
HTT-210ENST00000512909 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
HTT-210ENST00000512909 TIMELESSQ9UNS1 1208 aa8.23□□□□□ -1.09
HTT-210ENST00000512909 CD46P15529 392 aa8.22□□□□□ -1.09
HTT-210ENST00000512909 FLIIQ13045 1269 aa8.22□□□□□ -1.09
HTT-210ENST00000512909 KMT5BQ4FZB7 885 aa8.22□□□□□ -1.09
HTT-210ENST00000512909 POTEB3A0JP26 581 aa8.21□□□□□ -1.1
HTT-210ENST00000512909 LSM11P83369 360 aaKnown RBP eCLIP8.21□□□□□ -1.1
HTT-210ENST00000512909 POTEBQ6S5H4 581 aa8.21□□□□□ -1.1
HTT-210ENST00000512909 LRCH3Q96II8 777 aa8.21□□□□□ -1.1
HTT-210ENST00000512909 KDM4AO75164 1064 aa8.2□□□□□ -1.1
HTT-210ENST00000512909 USP46P62068 366 aa8.2□□□□□ -1.1
HTT-210ENST00000512909 CSPP1Q1MSJ5 1256 aa8.2□□□□□ -1.1
HTT-210ENST00000512909 MYSM1Q5VVJ2 828 aa8.2□□□□□ -1.1
HTT-210ENST00000512909 ADGRD1Q6QNK2 874 aa8.2□□□□□ -1.1
HTT-210ENST00000512909 SAMD7Q7Z3H4 446 aa8.2□□□□□ -1.1
HTT-210ENST00000512909 RIC3Q7Z5B4 369 aa8.2□□□□□ -1.1
HTT-210ENST00000512909 ANKK1Q8NFD2 765 aa8.2□□□□□ -1.1
HTT-210ENST00000512909 NUTM2BA6NNL0 878 aaPredicted RBP8.19□□□□□ -1.1
HTT-210ENST00000512909 NUTM2EB1AL46 878 aaPredicted RBP8.19□□□□□ -1.1
HTT-210ENST00000512909 NUTM2DQ5VT03 806 aaPredicted RBP8.19□□□□□ -1.1
HTT-210ENST00000512909 NUTM2AQ8IVF1 878 aaPredicted RBP8.19□□□□□ -1.1
HTT-210ENST00000512909 SPIRE2Q8WWL2 714 aa8.19□□□□□ -1.1
HTT-210ENST00000512909 PRR14Q9BWN1 585 aa8.19□□□□□ -1.1
HTT-210ENST00000512909 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.19□□□□□ -1.1
HTT-210ENST00000512909 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
HTT-210ENST00000512909 ZFRQ96KR1 1074 aaKnown RBP8.18□□□□□ -1.1
HTT-210ENST00000512909 POTEEQ6S8J3 1075 aa8.17□□□□□ -1.1
HTT-210ENST00000512909 CFHP08603 1231 aa8.16□□□□□ -1.1
HTT-210ENST00000512909 GCGRP47871 477 aa8.16□□□□□ -1.1
HTT-210ENST00000512909 RAD21O60216 631 aa8.15□□□□□ -1.1
HTT-210ENST00000512909 PPP4CP60510 307 aa8.15□□□□□ -1.1
HTT-210ENST00000512909 PROCA1Q8NCQ7 364 aaPredicted RBP8.15□□□□□ -1.1
HTT-210ENST00000512909 PRM3Q9NNZ6 103 aa8.15□□□□□ -1.1
HTT-210ENST00000512909 APBB1O00213 710 aa8.14□□□□□ -1.11
HTT-210ENST00000512909 FDX1P10109 184 aa8.14□□□□□ -1.11
HTT-210ENST00000512909 MOXD2PA6NHM9 499 aa8.13□□□□□ -1.11
HTT-210ENST00000512909 SPTLC1O15269 473 aa8.13□□□□□ -1.11
HTT-210ENST00000512909 UBTFP17480 764 aaKnown RBP8.13□□□□□ -1.11
HTT-210ENST00000512909 TMEM259Q4ZIN3 620 aa8.13□□□□□ -1.11
HTT-210ENST00000512909 RSBN1LQ6PCB5 846 aaPredicted RBP8.13□□□□□ -1.11
HTT-210ENST00000512909 WNT2BQ93097 391 aa8.13□□□□□ -1.11
HTT-210ENST00000512909 NDUFV2P19404 249 aa8.12□□□□□ -1.11
HTT-210ENST00000512909 TSC1Q92574 1164 aa8.12□□□□□ -1.11
HTT-210ENST00000512909 ZBTB3Q9H5J0 574 aa8.12□□□□□ -1.11
HTT-210ENST00000512909 BHMG1C9JSJ3 638 aaPredicted RBP8.11□□□□□ -1.11
HTT-210ENST00000512909 C6orf229H3BNL8 230 aa8.11□□□□□ -1.11
HTT-210ENST00000512909 SLC10A3P09131 477 aa8.11□□□□□ -1.11
HTT-210ENST00000512909 GJA5P36382 358 aa8.11□□□□□ -1.11
HTT-210ENST00000512909 ATP6V1AP38606 617 aa8.11□□□□□ -1.11
HTT-210ENST00000512909 WWC1Q8IX03 1113 aa8.11□□□□□ -1.11
HTT-210ENST00000512909 LIMD1Q9UGP4 676 aa8.11□□□□□ -1.11
HTT-210ENST00000512909 HPS5Q9UPZ3 1129 aa8.11□□□□□ -1.11
HTT-210ENST00000512909 HOXA2O43364 376 aa8.1□□□□□ -1.11
HTT-210ENST00000512909 AP1G2O75843 785 aa8.1□□□□□ -1.11
HTT-210ENST00000512909 TUSC1Q2TAM9 212 aa8.1□□□□□ -1.11
HTT-210ENST00000512909 ZMYND15Q9H091 742 aa8.1□□□□□ -1.11
HTT-210ENST00000512909 RFC5P40937 340 aa8.09□□□□□ -1.11
HTT-210ENST00000512909 FUT2Q10981 343 aa8.09□□□□□ -1.11
HTT-210ENST00000512909 Q3C1V9 767 aa8.09□□□□□ -1.11
HTT-210ENST00000512909 PRPF38BQ5VTL8 546 aaKnown RBP8.09□□□□□ -1.11
HTT-210ENST00000512909 HELBQ8NG08 1087 aaPredicted RBP8.09□□□□□ -1.11
HTT-210ENST00000512909 TSR3Q9UJK0 312 aaKnown RBP8.09□□□□□ -1.11
HTT-210ENST00000512909 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.08□□□□□ -1.12
HTT-210ENST00000512909 SOWAHBA6NEL2 793 aa8.07□□□□□ -1.12
HTT-210ENST00000512909 SPDYE5A6NIY4 337 aa8.07□□□□□ -1.12
HTT-210ENST00000512909 MTMR2Q13614 643 aa8.07□□□□□ -1.12
HTT-210ENST00000512909 BANK1Q8NDB2 785 aa8.07□□□□□ -1.12
HTT-210ENST00000512909 RNF166Q96A37 237 aaPredicted RBP8.07□□□□□ -1.12
HTT-210ENST00000512909 HRO43593 1189 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms