RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TEFQ10587 303 aa15.3■□□□□ 0.04
COL11A1-210ENST00000512756 NUTM2FA1L443 756 aa15.3■□□□□ 0.04
COL11A1-210ENST00000512756 ZKSCAN1P17029 563 aaPredicted RBP15.3■□□□□ 0.04
COL11A1-210ENST00000512756 RIPK4P57078 832 aa15.3■□□□□ 0.04
COL11A1-210ENST00000512756 HSP90AA2PQ14568 343 aaPredicted RBP15.29■□□□□ 0.04
COL11A1-210ENST00000512756 NEXNQ0ZGT2 675 aa15.29■□□□□ 0.04
COL11A1-210ENST00000512756 BECN2A8MW95 431 aa15.29■□□□□ 0.04
COL11A1-210ENST00000512756 MINK1Q8N4C8 1332 aaPredicted RBP15.29■□□□□ 0.04
COL11A1-210ENST00000512756 BRD4O60885 1362 aaPredicted RBP15.28■□□□□ 0.04
COL11A1-210ENST00000512756 CPLX2Q6PUV4 134 aaKnown RBP15.28■□□□□ 0.04
COL11A1-210ENST00000512756 TNNT3P45378 269 aaPredicted RBP15.27■□□□□ 0.04
COL11A1-210ENST00000512756 LRRC9Q6ZRR7 1453 aa15.27■□□□□ 0.03
COL11A1-210ENST00000512756 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.03
COL11A1-210ENST00000512756 GNAI1P63096 354 aa15.27■□□□□ 0.03
COL11A1-210ENST00000512756 KIF21BO75037 1637 aa15.26■□□□□ 0.03
COL11A1-210ENST00000512756 FRAT2O75474 233 aaPredicted RBP15.26■□□□□ 0.03
COL11A1-210ENST00000512756 NUCB2P80303 420 aa15.26■□□□□ 0.03
COL11A1-210ENST00000512756 FGD5Q6ZNL6 1462 aa15.26■□□□□ 0.03
COL11A1-210ENST00000512756 C9orf78Q9NZ63 289 aaPredicted RBP15.26■□□□□ 0.03
COL11A1-210ENST00000512756 INTS3Q68E01 1043 aaKnown RBP15.25■□□□□ 0.03
COL11A1-210ENST00000512756 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
COL11A1-210ENST00000512756 CREBRFQ8IUR6 639 aa15.25■□□□□ 0.03
COL11A1-210ENST00000512756 AKAP17AQ02040 695 aaKnown RBP15.24■□□□□ 0.03
COL11A1-210ENST00000512756 TSR1Q2NL82 804 aaKnown RBP15.24■□□□□ 0.03
COL11A1-210ENST00000512756 SYNE3Q6ZMZ3 975 aa15.24■□□□□ 0.03
COL11A1-210ENST00000512756 RNF20Q5VTR2 975 aa15.24■□□□□ 0.03
COL11A1-210ENST00000512756 IFIT2P09913 472 aaKnown RBP15.23■□□□□ 0.03
COL11A1-210ENST00000512756 TPD52L1Q16890 204 aaPredicted RBP15.23■□□□□ 0.03
COL11A1-210ENST00000512756 HSP90AB4PQ58FF6 505 aa15.23■□□□□ 0.03
COL11A1-210ENST00000512756 CCDC9Q9Y3X0 531 aaKnown RBP15.23■□□□□ 0.03
COL11A1-210ENST00000512756 FYCO1Q9BQS8 1478 aa15.23■□□□□ 0.03
COL11A1-210ENST00000512756 TPM1P09493 284 aa15.23■□□□□ 0.03
COL11A1-210ENST00000512756 ANKRD50Q9ULJ7 1429 aa15.23■□□□□ 0.03
COL11A1-210ENST00000512756 DDX58O95786 925 aaKnown RBP15.23■□□□□ 0.03
COL11A1-210ENST00000512756 TTC5Q8N0Z6 440 aa15.22■□□□□ 0.03
COL11A1-210ENST00000512756 CASKIN1Q8WXD9 1431 aa15.22■□□□□ 0.03
COL11A1-210ENST00000512756 MARCH6O60337 910 aa15.22■□□□□ 0.03
COL11A1-210ENST00000512756 C22orf23Q9BZE7 217 aa15.22■□□□□ 0.03
COL11A1-210ENST00000512756 G3V3G9 751 aa15.21■□□□□ 0.03
COL11A1-210ENST00000512756 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
COL11A1-210ENST00000512756 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.21■□□□□ 0.03
COL11A1-210ENST00000512756 A0A0U1RQG5 324 aaPredicted RBP15.21■□□□□ 0.02
COL11A1-210ENST00000512756 MCTP1Q6DN14 999 aa15.21■□□□□ 0.02
COL11A1-210ENST00000512756 ANO2Q9NQ90 1003 aa15.21■□□□□ 0.02
COL11A1-210ENST00000512756 WASHC2AQ641Q2 1341 aa15.2■□□□□ 0.02
COL11A1-210ENST00000512756 EIF2S2P20042 333 aaKnown RBP15.2■□□□□ 0.02
COL11A1-210ENST00000512756 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
COL11A1-210ENST00000512756 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
COL11A1-210ENST00000512756 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
COL11A1-210ENST00000512756 CEP89Q96ST8 783 aa15.2■□□□□ 0.02
COL11A1-210ENST00000512756 TRIM29Q14134 588 aa15.2■□□□□ 0.02
COL11A1-210ENST00000512756 TPM2P07951 284 aa15.19■□□□□ 0.02
COL11A1-210ENST00000512756 G3BP1Q13283 466 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL11A1-210ENST00000512756 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
COL11A1-210ENST00000512756 ZNF644Q9H582 1327 aaPredicted RBP15.19■□□□□ 0.02
COL11A1-210ENST00000512756 NCOA2Q15596 1464 aa15.19■□□□□ 0.02
COL11A1-210ENST00000512756 ERC2O15083 957 aa15.18■□□□□ 0.02
COL11A1-210ENST00000512756 LNPKQ9C0E8 428 aa15.18■□□□□ 0.02
COL11A1-210ENST00000512756 PES1O00541 588 aaKnown RBP15.18■□□□□ 0.02
COL11A1-210ENST00000512756 GPS2Q13227 327 aa15.18■□□□□ 0.02
COL11A1-210ENST00000512756 CPLX1O14810 134 aa15.18■□□□□ 0.02
COL11A1-210ENST00000512756 SMC3Q9UQE7 1217 aa15.17■□□□□ 0.02
COL11A1-210ENST00000512756 CDC45O75419 566 aa15.17■□□□□ 0.02
COL11A1-210ENST00000512756 RRBP1Q9P2E9 1410 aaKnown RBP15.17■□□□□ 0.02
COL11A1-210ENST00000512756 HOOK1Q9UJC3 728 aaKnown RBP15.16■□□□□ 0.02
COL11A1-210ENST00000512756 ADAMTS8Q9UP79 889 aa15.16■□□□□ 0.02
COL11A1-210ENST00000512756 NFKBIBQ15653 356 aa15.16■□□□□ 0.02
COL11A1-210ENST00000512756 CCDC70Q6NSX1 233 aa15.16■□□□□ 0.02
COL11A1-210ENST00000512756 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.16■□□□□ 0.02
COL11A1-210ENST00000512756 BICD2Q8TD16 824 aa15.16■□□□□ 0.02
COL11A1-210ENST00000512756 TSPYL4Q9UJ04 414 aa15.16■□□□□ 0.02
COL11A1-210ENST00000512756 TRDNQ13061 729 aa15.16■□□□□ 0.02
COL11A1-210ENST00000512756 PANK1Q8TE04 598 aa15.15■□□□□ 0.02
COL11A1-210ENST00000512756 ERICH3Q5RHP9 1530 aa15.15■□□□□ 0.02
COL11A1-210ENST00000512756 ANKRD20A12PQ8NF67 263 aa15.15■□□□□ 0.02
COL11A1-210ENST00000512756 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
COL11A1-210ENST00000512756 CCDC47Q96A33 483 aaKnown RBP15.14■□□□□ 0.01
COL11A1-210ENST00000512756 IPO7O95373 1038 aaKnown RBP15.14■□□□□ 0.01
COL11A1-210ENST00000512756 MRE11P49959 708 aa15.14■□□□□ 0.01
COL11A1-210ENST00000512756 AMOTL1Q8IY63 956 aa15.14■□□□□ 0.01
COL11A1-210ENST00000512756 VPS37CA5D8V6 355 aaPredicted RBP15.13■□□□□ 0.01
COL11A1-210ENST00000512756 CCAR2Q8N163 923 aaKnown RBP15.13■□□□□ 0.01
COL11A1-210ENST00000512756 FAM43AQ8N2R8 423 aa15.13■□□□□ 0.01
COL11A1-210ENST00000512756 PDE3AQ14432 1141 aa15.12■□□□□ 0.01
COL11A1-210ENST00000512756 SASS6Q6UVJ0 657 aa15.12■□□□□ 0.01
COL11A1-210ENST00000512756 EVA1CP58658 441 aa15.12■□□□□ 0.01
COL11A1-210ENST00000512756 VPS53Q5VIR6 699 aa15.12■□□□□ 0.01
COL11A1-210ENST00000512756 TCP11L2Q8N4U5 519 aa15.12■□□□□ 0.01
COL11A1-210ENST00000512756 NECTIN2Q92692 538 aa15.12■□□□□ 0.01
COL11A1-210ENST00000512756 GGNBP2Q9H3C7 697 aa15.12■□□□□ 0.01
COL11A1-210ENST00000512756 HFM1A2PYH4 1435 aa15.12■□□□□ 0.01
COL11A1-210ENST00000512756 SCAPERQ9BY12 1400 aa15.12■□□□□ 0.01
COL11A1-210ENST00000512756 NOL10Q9BSC4 688 aaKnown RBP15.11■□□□□ 0.01
COL11A1-210ENST00000512756 PPP2R1AP30153 589 aa15.11■□□□□ 0.01
COL11A1-210ENST00000512756 MTHFSP49914 203 aa15.11■□□□□ 0.01
COL11A1-210ENST00000512756 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
COL11A1-210ENST00000512756 APPP05067 770 aa15.11■□□□□ 0.01
COL11A1-210ENST00000512756 HMOX1P09601 288 aa15.11■□□□□ 0.01
COL11A1-210ENST00000512756 PSME1Q06323 249 aa15.11■□□□□ 0.01
COL11A1-210ENST00000512756 CCDC73Q6ZRK6 1079 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms