RNA–Protein interactions for RNA: ENST00000512694.5

DDR1-268, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-268ENST00000512694 FAM135BQ49AJ0 1406 aa24.76■■□□□ 1.55
DDR1-268ENST00000512694 RGS17Q9UGC6 210 aaPredicted RBP24.75■■□□□ 1.55
DDR1-268ENST00000512694 CHD2O14647 1828 aaKnown RBP24.74■■□□□ 1.55
DDR1-268ENST00000512694 PHLPP1O60346 1717 aa24.73■■□□□ 1.55
DDR1-268ENST00000512694 NKTRP30414 1462 aaKnown RBP24.73■■□□□ 1.55
DDR1-268ENST00000512694 ANKRD50Q9ULJ7 1429 aa24.71■■□□□ 1.55
DDR1-268ENST00000512694 TMEM131LA2VDJ0 1609 aa24.7■■□□□ 1.54
DDR1-268ENST00000512694 RPRD2Q5VT52 1461 aaKnown RBP24.69■■□□□ 1.54
DDR1-268ENST00000512694 PPP1R15AO75807 674 aaPredicted RBP24.68■■□□□ 1.54
DDR1-268ENST00000512694 SLC52A1Q9NWF4 448 aa24.68■■□□□ 1.54
DDR1-268ENST00000512694 E9PCH4 1651 aa24.68■■□□□ 1.54
DDR1-268ENST00000512694 ZFYVE9O95405 1425 aa24.68■■□□□ 1.54
DDR1-268ENST00000512694 MSH6P52701 1360 aa24.67■■□□□ 1.54
DDR1-268ENST00000512694 UNC13BO14795 1591 aa24.67■■□□□ 1.54
DDR1-268ENST00000512694 RIMS2Q9UQ26 1411 aa24.67■■□□□ 1.54
DDR1-268ENST00000512694 SETD1AO15047 1707 aaKnown RBP24.65■■□□□ 1.54
DDR1-268ENST00000512694 CHGAP10645 457 aaKnown RBP24.64■■□□□ 1.54
DDR1-268ENST00000512694 PLEKHG1Q9ULL1 1385 aa24.64■■□□□ 1.53
DDR1-268ENST00000512694 POTEAQ6S8J7 498 aa24.63■■□□□ 1.53
DDR1-268ENST00000512694 NUTM2DQ5VT03 806 aaPredicted RBP24.62■■□□□ 1.53
DDR1-268ENST00000512694 SLAIN2Q9P270 581 aa24.59■■□□□ 1.53
DDR1-268ENST00000512694 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.58■■□□□ 1.52
DDR1-268ENST00000512694 COL16A1Q07092 1604 aaPredicted RBP24.57■■□□□ 1.52
DDR1-268ENST00000512694 IQGAP3Q86VI3 1631 aa24.57■■□□□ 1.52
DDR1-268ENST00000512694 C14orf37Q86TY3 774 aa24.57■■□□□ 1.52
DDR1-268ENST00000512694 HDGFP51858 240 aaKnown RBP24.54■■□□□ 1.52
DDR1-268ENST00000512694 DIP2AQ14689 1571 aa24.53■■□□□ 1.52
DDR1-268ENST00000512694 JCADQ9P266 1359 aa24.53■■□□□ 1.52
DDR1-268ENST00000512694 ADAMTS13Q76LX8 1427 aa24.52■■□□□ 1.52
DDR1-268ENST00000512694 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.5■■□□□ 1.51
DDR1-268ENST00000512694 TBX22Q9Y458 520 aa24.5■■□□□ 1.51
DDR1-268ENST00000512694 ITGAEP38570 1179 aa24.49■■□□□ 1.51
DDR1-268ENST00000512694 TRPM2O94759 1503 aa24.48■■□□□ 1.51
DDR1-268ENST00000512694 SPHKAPQ2M3C7 1700 aa24.48■■□□□ 1.51
DDR1-268ENST00000512694 LRP6O75581 1613 aa24.47■■□□□ 1.51
DDR1-268ENST00000512694 SHPRHQ149N8 1683 aa24.46■■□□□ 1.51
DDR1-268ENST00000512694 NUP155O75694 1391 aa24.45■■□□□ 1.5
DDR1-268ENST00000512694 ROCK1Q13464 1354 aa24.45■■□□□ 1.5
DDR1-268ENST00000512694 AHDC1Q5TGY3 1603 aaPredicted RBP24.45■■□□□ 1.5
DDR1-268ENST00000512694 PTPRUQ92729 1446 aa24.44■■□□□ 1.5
DDR1-268ENST00000512694 NCOA3Q9Y6Q9 1424 aa24.44■■□□□ 1.5
DDR1-268ENST00000512694 NRXN3Q9Y4C0 1643 aa24.43■■□□□ 1.5
DDR1-268ENST00000512694 ATF3P18847 181 aa24.43■■□□□ 1.5
DDR1-268ENST00000512694 MEX3CQ5U5Q3 659 aaKnown RBP24.43■■□□□ 1.5
DDR1-268ENST00000512694 PPARGC1BQ86YN6 1023 aaKnown RBP24.42■■□□□ 1.5
DDR1-268ENST00000512694 XRN1Q8IZH2 1706 aaKnown RBP24.41■■□□□ 1.5
DDR1-268ENST00000512694 PIK3R4Q99570 1358 aa24.41■■□□□ 1.5
DDR1-268ENST00000512694 CADPS2Q86UW7 1296 aa24.4■■□□□ 1.5
DDR1-268ENST00000512694 C19orf44Q9H6X5 657 aa24.4■■□□□ 1.5
DDR1-268ENST00000512694 AMOTL2Q9Y2J4 779 aa24.4■■□□□ 1.5
DDR1-268ENST00000512694 SPATA31A6Q5VVP1 1343 aa24.36■■□□□ 1.49
DDR1-268ENST00000512694 SETBP1Q9Y6X0 1596 aa24.36■■□□□ 1.49
DDR1-268ENST00000512694 ZNF326Q5BKZ1 582 aaKnown RBP24.35■■□□□ 1.49
DDR1-268ENST00000512694 NUTM2BA6NNL0 878 aaPredicted RBP24.34■■□□□ 1.49
DDR1-268ENST00000512694 NUTM2EB1AL46 878 aaPredicted RBP24.34■■□□□ 1.49
DDR1-268ENST00000512694 BRINP3Q76B58 766 aa24.34■■□□□ 1.49
DDR1-268ENST00000512694 NUTM2AQ8IVF1 878 aaPredicted RBP24.34■■□□□ 1.49
DDR1-268ENST00000512694 TRIM52Q96A61 297 aa24.34■■□□□ 1.49
DDR1-268ENST00000512694 CLTCL1P53675 1640 aa24.34■■□□□ 1.49
DDR1-268ENST00000512694 ASXL1Q8IXJ9 1541 aa24.34■■□□□ 1.49
DDR1-268ENST00000512694 NALCNQ8IZF0 1738 aa24.33■■□□□ 1.49
DDR1-268ENST00000512694 NHSL1Q5SYE7 1610 aa24.33■■□□□ 1.49
DDR1-268ENST00000512694 KIF1BO60333 1816 aa24.33■■□□□ 1.48
DDR1-268ENST00000512694 DCCP43146 1447 aa24.3■■□□□ 1.48
DDR1-268ENST00000512694 ZNF772Q68DY9 489 aaPredicted RBP24.29■■□□□ 1.48
DDR1-268ENST00000512694 METP08581 1390 aa24.29■■□□□ 1.48
DDR1-268ENST00000512694 MST1RQ04912 1400 aa24.28■■□□□ 1.48
DDR1-268ENST00000512694 NEXMIFQ5QGS0 1516 aa24.27■■□□□ 1.48
DDR1-268ENST00000512694 DDX17Q92841 729 aaKnown RBP24.25■■□□□ 1.47
DDR1-268ENST00000512694 ADGRL3Q9HAR2 1447 aa24.22■■□□□ 1.47
DDR1-268ENST00000512694 RRBP1Q9P2E9 1410 aaKnown RBP24.22■■□□□ 1.47
DDR1-268ENST00000512694 AFF2P51816 1311 aa24.21■■□□□ 1.47
DDR1-268ENST00000512694 SETD5Q9C0A6 1442 aa24.2■■□□□ 1.46
DDR1-268ENST00000512694 RXRBP28702 533 aa24.2■■□□□ 1.46
DDR1-268ENST00000512694 UPF1Q92900 1129 aaKnown RBP eCLIP24.2■■□□□ 1.46
DDR1-268ENST00000512694 C8orf37Q96NL8 207 aa24.16■■□□□ 1.46
DDR1-268ENST00000512694 PNPLA6Q8IY17 1366 aa24.16■■□□□ 1.46
DDR1-268ENST00000512694 LRRC59Q96AG4 307 aaKnown RBP24.14■■□□□ 1.45
DDR1-268ENST00000512694 PPLO60437 1756 aa24.14■■□□□ 1.45
DDR1-268ENST00000512694 NAIPQ13075 1403 aa24.12■■□□□ 1.45
DDR1-268ENST00000512694 C1orf167Q5SNV9 1468 aa24.12■■□□□ 1.45
DDR1-268ENST00000512694 CDK12Q9NYV4 1490 aaPredicted RBP24.12■■□□□ 1.45
DDR1-268ENST00000512694 RGS12O14924 1447 aa24.1■■□□□ 1.45
DDR1-268ENST00000512694 ROBO2Q9HCK4 1378 aa24.09■■□□□ 1.45
DDR1-268ENST00000512694 ADAMTS2O95450 1211 aa24.09■■□□□ 1.45
DDR1-268ENST00000512694 LAMC1P11047 1609 aa24.09■■□□□ 1.45
DDR1-268ENST00000512694 PTCH1Q13635 1447 aa24.09■■□□□ 1.45
DDR1-268ENST00000512694 ORAI2Q96SN7 254 aa24.06■■□□□ 1.44
DDR1-268ENST00000512694 QTRT2Q9H974 415 aaKnown RBP24.06■■□□□ 1.44
DDR1-268ENST00000512694 NGLY1Q96IV0 654 aa24.04■■□□□ 1.44
DDR1-268ENST00000512694 VGFO15240 615 aaPredicted RBP24.03■■□□□ 1.44
DDR1-268ENST00000512694 RBM6P78332 1123 aaKnown RBP24.02■■□□□ 1.44
DDR1-268ENST00000512694 SLC4A1APQ9BWU0 796 aaKnown RBP24■■□□□ 1.43
DDR1-268ENST00000512694 HFM1A2PYH4 1435 aa24■■□□□ 1.43
DDR1-268ENST00000512694 MARF1Q9Y4F3 1742 aaKnown RBP23.99■■□□□ 1.43
DDR1-268ENST00000512694 COL22A1Q8NFW1 1626 aaPredicted RBP23.99■■□□□ 1.43
DDR1-268ENST00000512694 SOS2Q07890 1332 aaPredicted RBP23.98■■□□□ 1.43
DDR1-268ENST00000512694 FOXD1Q16676 465 aa23.97■■□□□ 1.43
DDR1-268ENST00000512694 CDC42BPGQ6DT37 1551 aa23.96■■□□□ 1.43
DDR1-268ENST00000512694 PRAG1Q86YV5 1406 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms