RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 RIMS2Q9UQ26 1411 aa23.14■■□□□ 1.29
SGCA-208ENST00000512526 NPHP4O75161 1426 aaPredicted RBP23.12■■□□□ 1.29
SGCA-208ENST00000512526 ZNF326Q5BKZ1 582 aaKnown RBP23.12■■□□□ 1.29
SGCA-208ENST00000512526 DHX57Q6P158 1386 aaKnown RBP23.12■■□□□ 1.29
SGCA-208ENST00000512526 NEURL4Q96JN8 1562 aa23.11■■□□□ 1.29
SGCA-208ENST00000512526 SPATA31E1Q6ZUB1 1445 aa23.1■■□□□ 1.29
SGCA-208ENST00000512526 RPGRIP1LQ68CZ1 1315 aa23.09■■□□□ 1.29
SGCA-208ENST00000512526 NUTM2DQ5VT03 806 aaPredicted RBP23.09■■□□□ 1.29
SGCA-208ENST00000512526 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
SGCA-208ENST00000512526 PPP1R15AO75807 674 aaPredicted RBP23.06■■□□□ 1.28
SGCA-208ENST00000512526 PLEKHG1Q9ULL1 1385 aa23.05■■□□□ 1.28
SGCA-208ENST00000512526 VGFO15240 615 aaPredicted RBP23.03■■□□□ 1.28
SGCA-208ENST00000512526 SLC26A8Q96RN1 970 aa23.02■■□□□ 1.28
SGCA-208ENST00000512526 MYO5BQ9ULV0 1848 aa23.01■■□□□ 1.27
SGCA-208ENST00000512526 NEXMIFQ5QGS0 1516 aa23■■□□□ 1.27
SGCA-208ENST00000512526 BCANQ96GW7 911 aa23■■□□□ 1.27
SGCA-208ENST00000512526 TBX22Q9Y458 520 aa23■■□□□ 1.27
SGCA-208ENST00000512526 POLR1AO95602 1720 aaPredicted RBP22.99■■□□□ 1.27
SGCA-208ENST00000512526 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
SGCA-208ENST00000512526 ZNF335Q9H4Z2 1342 aaPredicted RBP22.99■■□□□ 1.27
SGCA-208ENST00000512526 SIN3AQ96ST3 1273 aa22.98■■□□□ 1.27
SGCA-208ENST00000512526 KIF1BO60333 1816 aa22.98■■□□□ 1.27
SGCA-208ENST00000512526 IQGAP1P46940 1657 aa22.97■■□□□ 1.27
SGCA-208ENST00000512526 ADGRF5Q8IZF2 1346 aa22.96■■□□□ 1.27
SGCA-208ENST00000512526 ADAMTS13Q76LX8 1427 aa22.96■■□□□ 1.27
SGCA-208ENST00000512526 STAC3Q96MF2 364 aa22.92■■□□□ 1.26
SGCA-208ENST00000512526 KCNA6P17658 529 aa22.91■■□□□ 1.26
SGCA-208ENST00000512526 NEUROD1Q13562 356 aa22.91■■□□□ 1.26
SGCA-208ENST00000512526 LTBP4Q8N2S1 1624 aa22.9■■□□□ 1.26
SGCA-208ENST00000512526 DCAF11Q8TEB1 546 aa22.9■■□□□ 1.26
SGCA-208ENST00000512526 SETBP1Q9Y6X0 1596 aa22.89■■□□□ 1.26
SGCA-208ENST00000512526 CERKQ8TCT0 537 aa22.88■■□□□ 1.25
SGCA-208ENST00000512526 KDM2AQ9Y2K7 1162 aa22.87■■□□□ 1.25
SGCA-208ENST00000512526 PIK3R4Q99570 1358 aa22.87■■□□□ 1.25
SGCA-208ENST00000512526 L3MBTL2Q969R5 705 aa22.86■■□□□ 1.25
SGCA-208ENST00000512526 METP08581 1390 aa22.86■■□□□ 1.25
SGCA-208ENST00000512526 MYOM2P54296 1465 aa22.85■■□□□ 1.25
SGCA-208ENST00000512526 NRXN1Q9ULB1 1477 aa22.85■■□□□ 1.25
SGCA-208ENST00000512526 PPLO60437 1756 aa22.84■■□□□ 1.25
SGCA-208ENST00000512526 NRXN3Q9Y4C0 1643 aa22.84■■□□□ 1.25
SGCA-208ENST00000512526 C14orf93Q9H972 538 aaKnown RBP22.84■■□□□ 1.25
SGCA-208ENST00000512526 PIK3C2GO75747 1445 aa22.83■■□□□ 1.25
SGCA-208ENST00000512526 DIP2AQ14689 1571 aa22.83■■□□□ 1.25
SGCA-208ENST00000512526 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
SGCA-208ENST00000512526 PTPRUQ92729 1446 aa22.82■■□□□ 1.24
SGCA-208ENST00000512526 AMOTL2Q9Y2J4 779 aa22.82■■□□□ 1.24
SGCA-208ENST00000512526 ALKQ9UM73 1620 aa22.8■■□□□ 1.24
SGCA-208ENST00000512526 CFAP70Q5T0N1 1121 aa22.8■■□□□ 1.24
SGCA-208ENST00000512526 CPS1P31327 1500 aa22.8■■□□□ 1.24
SGCA-208ENST00000512526 IFT172Q9UG01 1749 aa22.79■■□□□ 1.24
SGCA-208ENST00000512526 PROSER2Q86WR7 435 aaPredicted RBP22.77■■□□□ 1.24
SGCA-208ENST00000512526 LRRC7Q96NW7 1537 aa22.77■■□□□ 1.24
SGCA-208ENST00000512526 TMEM132EQ6IEE7 984 aa22.76■■□□□ 1.23
SGCA-208ENST00000512526 CCER1Q8TC90 406 aaPredicted RBP22.76■■□□□ 1.23
SGCA-208ENST00000512526 STRCP1A6NGW2 1772 aa22.75■■□□□ 1.23
SGCA-208ENST00000512526 NWD1Q149M9 1564 aa22.74■■□□□ 1.23
SGCA-208ENST00000512526 ILDR2Q71H61 639 aa22.73■■□□□ 1.23
SGCA-208ENST00000512526 RBM33Q96EV2 1170 aaKnown RBP22.73■■□□□ 1.23
SGCA-208ENST00000512526 NKTRP30414 1462 aaKnown RBP22.73■■□□□ 1.23
SGCA-208ENST00000512526 TMEM94Q12767 1356 aa22.72■■□□□ 1.23
SGCA-208ENST00000512526 IQSEC2Q5JU85 1478 aa22.72■■□□□ 1.23
SGCA-208ENST00000512526 PRAG1Q86YV5 1406 aa22.71■■□□□ 1.23
SGCA-208ENST00000512526 LRPPRCP42704 1394 aaKnown RBP22.7■■□□□ 1.22
SGCA-208ENST00000512526 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
SGCA-208ENST00000512526 ABCC11Q96J66 1382 aa22.7■■□□□ 1.22
SGCA-208ENST00000512526 CHD2O14647 1828 aaKnown RBP22.7■■□□□ 1.22
SGCA-208ENST00000512526 SETD1AO15047 1707 aaKnown RBP22.69■■□□□ 1.22
SGCA-208ENST00000512526 STK26Q9P289 416 aa22.68■■□□□ 1.22
SGCA-208ENST00000512526 ASXL1Q8IXJ9 1541 aa22.67■■□□□ 1.22
SGCA-208ENST00000512526 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
SGCA-208ENST00000512526 ROBO2Q9HCK4 1378 aa22.67■■□□□ 1.22
SGCA-208ENST00000512526 TIMELESSQ9UNS1 1208 aa22.67■■□□□ 1.22
SGCA-208ENST00000512526 NBPF1Q3BBV0 1214 aa22.66■■□□□ 1.22
SGCA-208ENST00000512526 NBPF8Q3BBV2 869 aa22.66■■□□□ 1.22
SGCA-208ENST00000512526 SIRT1Q96EB6 747 aa22.66■■□□□ 1.22
SGCA-208ENST00000512526 YTHDC2Q9H6S0 1430 aaKnown RBP22.65■■□□□ 1.22
SGCA-208ENST00000512526 TECPR2O15040 1411 aa22.65■■□□□ 1.22
SGCA-208ENST00000512526 XRN1Q8IZH2 1706 aaKnown RBP22.64■■□□□ 1.21
SGCA-208ENST00000512526 PTCH1Q13635 1447 aa22.64■■□□□ 1.21
SGCA-208ENST00000512526 ADGRB1O14514 1584 aa22.63■■□□□ 1.21
SGCA-208ENST00000512526 C19orf44Q9H6X5 657 aa22.62■■□□□ 1.21
SGCA-208ENST00000512526 DISP3Q9P2K9 1392 aa22.62■■□□□ 1.21
SGCA-208ENST00000512526 WAPLQ7Z5K2 1190 aa22.61■■□□□ 1.21
SGCA-208ENST00000512526 UBAP1LF5GYI3 381 aa22.6■■□□□ 1.21
SGCA-208ENST00000512526 TOM1O60784 492 aa22.59■■□□□ 1.21
SGCA-208ENST00000512526 TRAK1Q9UPV9 953 aa22.59■■□□□ 1.21
SGCA-208ENST00000512526 LAMC1P11047 1609 aa22.59■■□□□ 1.21
SGCA-208ENST00000512526 C14orf37Q86TY3 774 aa22.58■■□□□ 1.21
SGCA-208ENST00000512526 FAM135BQ49AJ0 1406 aa22.57■■□□□ 1.2
SGCA-208ENST00000512526 MSH6P52701 1360 aa22.57■■□□□ 1.2
SGCA-208ENST00000512526 PLEKHH1Q9ULM0 1364 aa22.56■■□□□ 1.2
SGCA-208ENST00000512526 SOCS7O14512 581 aa22.56■■□□□ 1.2
SGCA-208ENST00000512526 PRAM1Q96QH2 718 aa22.55■■□□□ 1.2
SGCA-208ENST00000512526 XIRP1Q702N8 1843 aaKnown RBP22.53■■□□□ 1.2
SGCA-208ENST00000512526 CADPS2Q86UW7 1296 aa22.53■■□□□ 1.2
SGCA-208ENST00000512526 DLC1Q96QB1 1528 aa22.52■■□□□ 1.2
SGCA-208ENST00000512526 ADGRL3Q9HAR2 1447 aa22.52■■□□□ 1.2
SGCA-208ENST00000512526 ATF3P18847 181 aa22.52■■□□□ 1.2
SGCA-208ENST00000512526 KIAA1210Q9ULL0 1709 aa22.51■■□□□ 1.19
SGCA-208ENST00000512526 POGKQ9P215 609 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms