RNA–Protein interactions for RNA: ENST00000511977.1

LETM1-205, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-205ENST00000511977 NAIPQ13075 1403 aa27.07■■□□□ 1.92
LETM1-205ENST00000511977 E9PCH4 1651 aa27.05■■□□□ 1.92
LETM1-205ENST00000511977 MYO5BQ9ULV0 1848 aa27.04■■□□□ 1.92
LETM1-205ENST00000511977 HFM1A2PYH4 1435 aa27.03■■□□□ 1.92
LETM1-205ENST00000511977 SLC26A8Q96RN1 970 aa27.02■■□□□ 1.92
LETM1-205ENST00000511977 RBM33Q96EV2 1170 aaKnown RBP27■■□□□ 1.91
LETM1-205ENST00000511977 TMEM94Q12767 1356 aa26.97■■□□□ 1.91
LETM1-205ENST00000511977 NWD1Q149M9 1564 aa26.96■■□□□ 1.91
LETM1-205ENST00000511977 TMEM131LA2VDJ0 1609 aa26.95■■□□□ 1.91
LETM1-205ENST00000511977 CHGAP10645 457 aaKnown RBP26.95■■□□□ 1.9
LETM1-205ENST00000511977 ZFYVE9O95405 1425 aa26.95■■□□□ 1.9
LETM1-205ENST00000511977 TRIM52Q96A61 297 aa26.94■■□□□ 1.9
LETM1-205ENST00000511977 KCNA6P17658 529 aa26.92■■□□□ 1.9
LETM1-205ENST00000511977 RIMS2Q9UQ26 1411 aa26.9■■□□□ 1.9
LETM1-205ENST00000511977 PPP1R15AO75807 674 aaPredicted RBP26.88■■□□□ 1.89
LETM1-205ENST00000511977 HDGFP51858 240 aaKnown RBP26.88■■□□□ 1.89
LETM1-205ENST00000511977 PROSER2Q86WR7 435 aaPredicted RBP26.88■■□□□ 1.89
LETM1-205ENST00000511977 BCANQ96GW7 911 aa26.88■■□□□ 1.89
LETM1-205ENST00000511977 NKTRP30414 1462 aaKnown RBP26.87■■□□□ 1.89
LETM1-205ENST00000511977 ROBO1Q9Y6N7 1651 aa26.87■■□□□ 1.89
LETM1-205ENST00000511977 PHF23Q9BUL5 403 aaPredicted RBP26.87■■□□□ 1.89
LETM1-205ENST00000511977 SPHKAPQ2M3C7 1700 aa26.87■■□□□ 1.89
LETM1-205ENST00000511977 PLEKHG1Q9ULL1 1385 aa26.86■■□□□ 1.89
LETM1-205ENST00000511977 NUTM2DQ5VT03 806 aaPredicted RBP26.85■■□□□ 1.89
LETM1-205ENST00000511977 FAM135BQ49AJ0 1406 aa26.83■■□□□ 1.89
LETM1-205ENST00000511977 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.83■■□□□ 1.89
LETM1-205ENST00000511977 SLC4A1APQ9BWU0 796 aaKnown RBP26.83■■□□□ 1.89
LETM1-205ENST00000511977 CHD2O14647 1828 aaKnown RBP26.83■■□□□ 1.89
LETM1-205ENST00000511977 TRPM2O94759 1503 aa26.8■■□□□ 1.88
LETM1-205ENST00000511977 ADAMTS13Q76LX8 1427 aa26.79■■□□□ 1.88
LETM1-205ENST00000511977 RGS17Q9UGC6 210 aaPredicted RBP26.76■■□□□ 1.87
LETM1-205ENST00000511977 ZNF326Q5BKZ1 582 aaKnown RBP26.75■■□□□ 1.87
LETM1-205ENST00000511977 CLTCL1P53675 1640 aa26.75■■□□□ 1.87
LETM1-205ENST00000511977 MSH6P52701 1360 aa26.74■■□□□ 1.87
LETM1-205ENST00000511977 SETD5Q9C0A6 1442 aa26.72■■□□□ 1.87
LETM1-205ENST00000511977 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.87
LETM1-205ENST00000511977 TBX22Q9Y458 520 aa26.7■■□□□ 1.86
LETM1-205ENST00000511977 DIP2AQ14689 1571 aa26.7■■□□□ 1.86
LETM1-205ENST00000511977 PHLPP1O60346 1717 aa26.7■■□□□ 1.86
LETM1-205ENST00000511977 NRXN3Q9Y4C0 1643 aa26.68■■□□□ 1.86
LETM1-205ENST00000511977 PTPRUQ92729 1446 aa26.68■■□□□ 1.86
LETM1-205ENST00000511977 FOXD1Q16676 465 aa26.67■■□□□ 1.86
LETM1-205ENST00000511977 MPHOSPH9Q99550 1183 aa26.67■■□□□ 1.86
LETM1-205ENST00000511977 SLAIN2Q9P270 581 aa26.67■■□□□ 1.86
LETM1-205ENST00000511977 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.65■■□□□ 1.86
LETM1-205ENST00000511977 KIF1BO60333 1816 aa26.64■■□□□ 1.85
LETM1-205ENST00000511977 COL16A1Q07092 1604 aaPredicted RBP26.64■■□□□ 1.85
LETM1-205ENST00000511977 RAB3GAP2Q9H2M9 1393 aa26.62■■□□□ 1.85
LETM1-205ENST00000511977 C14orf37Q86TY3 774 aa26.61■■□□□ 1.85
LETM1-205ENST00000511977 NEXMIFQ5QGS0 1516 aa26.6■■□□□ 1.85
LETM1-205ENST00000511977 POTEAQ6S8J7 498 aa26.6■■□□□ 1.85
LETM1-205ENST00000511977 XRN1Q8IZH2 1706 aaKnown RBP26.59■■□□□ 1.85
LETM1-205ENST00000511977 CCDC144AA2RUR9 1427 aa26.59■■□□□ 1.85
LETM1-205ENST00000511977 PIK3R4Q99570 1358 aa26.58■■□□□ 1.85
LETM1-205ENST00000511977 SETBP1Q9Y6X0 1596 aa26.58■■□□□ 1.85
LETM1-205ENST00000511977 AMOTL2Q9Y2J4 779 aa26.58■■□□□ 1.85
LETM1-205ENST00000511977 NCOA3Q9Y6Q9 1424 aa26.57■■□□□ 1.84
LETM1-205ENST00000511977 LRP6O75581 1613 aa26.54■■□□□ 1.84
LETM1-205ENST00000511977 METP08581 1390 aa26.54■■□□□ 1.84
LETM1-205ENST00000511977 JCADQ9P266 1359 aa26.54■■□□□ 1.84
LETM1-205ENST00000511977 VGFO15240 615 aaPredicted RBP26.53■■□□□ 1.84
LETM1-205ENST00000511977 RPGRIP1LQ68CZ1 1315 aa26.53■■□□□ 1.84
LETM1-205ENST00000511977 AHDC1Q5TGY3 1603 aaPredicted RBP26.52■■□□□ 1.84
LETM1-205ENST00000511977 C19orf44Q9H6X5 657 aa26.51■■□□□ 1.83
LETM1-205ENST00000511977 SETD1AO15047 1707 aaKnown RBP26.5■■□□□ 1.83
LETM1-205ENST00000511977 ATF3P18847 181 aa26.49■■□□□ 1.83
LETM1-205ENST00000511977 CADPS2Q86UW7 1296 aa26.49■■□□□ 1.83
LETM1-205ENST00000511977 RGL3Q3MIN7 710 aa26.47■■□□□ 1.83
LETM1-205ENST00000511977 BRINP3Q76B58 766 aa26.46■■□□□ 1.83
LETM1-205ENST00000511977 NALCNQ8IZF0 1738 aa26.45■■□□□ 1.83
LETM1-205ENST00000511977 SHPRHQ149N8 1683 aa26.44■■□□□ 1.82
LETM1-205ENST00000511977 MST1RQ04912 1400 aa26.44■■□□□ 1.82
LETM1-205ENST00000511977 SPATA31E1Q6ZUB1 1445 aa26.44■■□□□ 1.82
LETM1-205ENST00000511977 ASXL1Q8IXJ9 1541 aa26.44■■□□□ 1.82
LETM1-205ENST00000511977 PPLO60437 1756 aa26.43■■□□□ 1.82
LETM1-205ENST00000511977 HRCP23327 699 aa26.43■■□□□ 1.82
LETM1-205ENST00000511977 DCCP43146 1447 aa26.42■■□□□ 1.82
LETM1-205ENST00000511977 ANKRD30BQ9BXX2 1392 aa26.39■■□□□ 1.82
LETM1-205ENST00000511977 NHSL1Q5SYE7 1610 aa26.39■■□□□ 1.81
LETM1-205ENST00000511977 ADGRL3Q9HAR2 1447 aa26.39■■□□□ 1.81
LETM1-205ENST00000511977 DDX17Q92841 729 aaKnown RBP26.37■■□□□ 1.81
LETM1-205ENST00000511977 SPATA31A6Q5VVP1 1343 aa26.37■■□□□ 1.81
LETM1-205ENST00000511977 ADGRF5Q8IZF2 1346 aa26.36■■□□□ 1.81
LETM1-205ENST00000511977 MEX3CQ5U5Q3 659 aaKnown RBP26.34■■□□□ 1.81
LETM1-205ENST00000511977 IFT172Q9UG01 1749 aa26.33■■□□□ 1.81
LETM1-205ENST00000511977 NUTM2BA6NNL0 878 aaPredicted RBP26.32■■□□□ 1.8
LETM1-205ENST00000511977 NUTM2EB1AL46 878 aaPredicted RBP26.32■■□□□ 1.8
LETM1-205ENST00000511977 NUTM2AQ8IVF1 878 aaPredicted RBP26.32■■□□□ 1.8
LETM1-205ENST00000511977 ROBO2Q9HCK4 1378 aa26.32■■□□□ 1.8
LETM1-205ENST00000511977 PTCH1Q13635 1447 aa26.29■■□□□ 1.8
LETM1-205ENST00000511977 PIK3C2GO75747 1445 aa26.27■■□□□ 1.8
LETM1-205ENST00000511977 C1orf167Q5SNV9 1468 aa26.27■■□□□ 1.8
LETM1-205ENST00000511977 MYOM2P54296 1465 aa26.24■■□□□ 1.79
LETM1-205ENST00000511977 PRAG1Q86YV5 1406 aa26.23■■□□□ 1.79
LETM1-205ENST00000511977 PNPLA6Q8IY17 1366 aa26.23■■□□□ 1.79
LETM1-205ENST00000511977 ZNF772Q68DY9 489 aaPredicted RBP26.21■■□□□ 1.79
LETM1-205ENST00000511977 STK26Q9P289 416 aa26.21■■□□□ 1.79
LETM1-205ENST00000511977 AFF2P51816 1311 aa26.19■■□□□ 1.78
LETM1-205ENST00000511977 NRXN1Q9ULB1 1477 aa26.19■■□□□ 1.78
LETM1-205ENST00000511977 LAMC1P11047 1609 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms