RNA–Protein interactions for RNA: ENST00000511831.1

YIPF3-215, Transcript of Yip1 domain family member 3, humanhuman

TSL 4

Gene YIPF3, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-215ENST00000511831 SLAIN2Q9P270 581 aa16.28■□□□□ 0.2
YIPF3-215ENST00000511831 NOS1P29475 1434 aa16.28■□□□□ 0.2
YIPF3-215ENST00000511831 COL16A1Q07092 1604 aaPredicted RBP16.27■□□□□ 0.19
YIPF3-215ENST00000511831 LOC105371045A0A1W2PR82 267 aa16.26■□□□□ 0.19
YIPF3-215ENST00000511831 TRIM52Q96A61 297 aa16.25■□□□□ 0.19
YIPF3-215ENST00000511831 MEX3CQ5U5Q3 659 aaKnown RBP16.23■□□□□ 0.19
YIPF3-215ENST00000511831 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
YIPF3-215ENST00000511831 UPF1Q92900 1129 aaKnown RBP eCLIP16.22■□□□□ 0.19
YIPF3-215ENST00000511831 ANKRD30AQ9BXX3 1397 aa16.22■□□□□ 0.19
YIPF3-215ENST00000511831 MYO5BQ9ULV0 1848 aa16.22■□□□□ 0.19
YIPF3-215ENST00000511831 RIMS2Q9UQ26 1411 aa16.21■□□□□ 0.19
YIPF3-215ENST00000511831 PPP1R15AO75807 674 aaPredicted RBP16.21■□□□□ 0.19
YIPF3-215ENST00000511831 PLEKHG1Q9ULL1 1385 aa16.21■□□□□ 0.19
YIPF3-215ENST00000511831 FGD6Q6ZV73 1430 aa16.2■□□□□ 0.18
YIPF3-215ENST00000511831 CHD2O14647 1828 aaKnown RBP16.2■□□□□ 0.18
YIPF3-215ENST00000511831 C14orf37Q86TY3 774 aa16.2■□□□□ 0.18
YIPF3-215ENST00000511831 GCC2Q8IWJ2 1684 aa16.19■□□□□ 0.18
YIPF3-215ENST00000511831 NUTM2DQ5VT03 806 aaPredicted RBP16.19■□□□□ 0.18
YIPF3-215ENST00000511831 SLC52A1Q9NWF4 448 aa16.19■□□□□ 0.18
YIPF3-215ENST00000511831 SPATA31A6Q5VVP1 1343 aa16.18■□□□□ 0.18
YIPF3-215ENST00000511831 AHDC1Q5TGY3 1603 aaPredicted RBP16.16■□□□□ 0.18
YIPF3-215ENST00000511831 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
YIPF3-215ENST00000511831 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
YIPF3-215ENST00000511831 CHGAP10645 457 aaKnown RBP16.16■□□□□ 0.18
YIPF3-215ENST00000511831 ZNF772Q68DY9 489 aaPredicted RBP16.16■□□□□ 0.18
YIPF3-215ENST00000511831 NUTM2AQ8IVF1 878 aaPredicted RBP16.16■□□□□ 0.18
YIPF3-215ENST00000511831 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
YIPF3-215ENST00000511831 TMEM131LA2VDJ0 1609 aa16.16■□□□□ 0.18
YIPF3-215ENST00000511831 SHPRHQ149N8 1683 aa16.14■□□□□ 0.18
YIPF3-215ENST00000511831 ADAMTS13Q76LX8 1427 aa16.14■□□□□ 0.17
YIPF3-215ENST00000511831 TBX22Q9Y458 520 aa16.13■□□□□ 0.17
YIPF3-215ENST00000511831 ADGRL2O95490 1459 aa16.13■□□□□ 0.17
YIPF3-215ENST00000511831 RPRD2Q5VT52 1461 aaKnown RBP16.13■□□□□ 0.17
YIPF3-215ENST00000511831 DIP2AQ14689 1571 aa16.13■□□□□ 0.17
YIPF3-215ENST00000511831 ATF3P18847 181 aa16.12■□□□□ 0.17
YIPF3-215ENST00000511831 RXRBP28702 533 aa16.12■□□□□ 0.17
YIPF3-215ENST00000511831 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
YIPF3-215ENST00000511831 BRINP3Q76B58 766 aa16.11■□□□□ 0.17
YIPF3-215ENST00000511831 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
YIPF3-215ENST00000511831 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
YIPF3-215ENST00000511831 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
YIPF3-215ENST00000511831 APLP2Q06481 763 aa16.1■□□□□ 0.17
YIPF3-215ENST00000511831 C19orf44Q9H6X5 657 aa16.1■□□□□ 0.17
YIPF3-215ENST00000511831 AFF2P51816 1311 aa16.1■□□□□ 0.17
YIPF3-215ENST00000511831 HDGFP51858 240 aaKnown RBP16.09■□□□□ 0.17
YIPF3-215ENST00000511831 FAM50AQ14320 339 aaKnown RBP16.09■□□□□ 0.17
YIPF3-215ENST00000511831 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.08■□□□□ 0.16
YIPF3-215ENST00000511831 AMOTL2Q9Y2J4 779 aa16.07■□□□□ 0.16
YIPF3-215ENST00000511831 ASXL1Q8IXJ9 1541 aa16.07■□□□□ 0.16
YIPF3-215ENST00000511831 RGS12O14924 1447 aa16.06■□□□□ 0.16
YIPF3-215ENST00000511831 DDX17Q92841 729 aaKnown RBP16.06■□□□□ 0.16
YIPF3-215ENST00000511831 E9PCH4 1651 aa16.05■□□□□ 0.16
YIPF3-215ENST00000511831 TRPM2O94759 1503 aa16.05■□□□□ 0.16
YIPF3-215ENST00000511831 CDK12Q9NYV4 1490 aaPredicted RBP16.05■□□□□ 0.16
YIPF3-215ENST00000511831 PIK3R4Q99570 1358 aa16.05■□□□□ 0.16
YIPF3-215ENST00000511831 SRCAPQ6ZRS2 3230 aa16.05■□□□□ 0.16
YIPF3-215ENST00000511831 C8orf37Q96NL8 207 aa16.04■□□□□ 0.16
YIPF3-215ENST00000511831 UNC13BO14795 1591 aa16.04■□□□□ 0.16
YIPF3-215ENST00000511831 MST1RQ04912 1400 aa16.02■□□□□ 0.16
YIPF3-215ENST00000511831 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.16
YIPF3-215ENST00000511831 NHSL1Q5SYE7 1610 aa16.01■□□□□ 0.15
YIPF3-215ENST00000511831 XRN1Q8IZH2 1706 aaKnown RBP16.01■□□□□ 0.15
YIPF3-215ENST00000511831 DCCP43146 1447 aa16.01■□□□□ 0.15
YIPF3-215ENST00000511831 NRXN3Q9Y4C0 1643 aa16.01■□□□□ 0.15
YIPF3-215ENST00000511831 QTRT2Q9H974 415 aaKnown RBP16■□□□□ 0.15
YIPF3-215ENST00000511831 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
YIPF3-215ENST00000511831 METP08581 1390 aa15.98■□□□□ 0.15
YIPF3-215ENST00000511831 ADAMTS2O95450 1211 aa15.97■□□□□ 0.15
YIPF3-215ENST00000511831 RBM6P78332 1123 aaKnown RBP15.97■□□□□ 0.15
YIPF3-215ENST00000511831 IQGAP3Q86VI3 1631 aa15.97■□□□□ 0.15
YIPF3-215ENST00000511831 LRRC59Q96AG4 307 aaKnown RBP15.96■□□□□ 0.15
YIPF3-215ENST00000511831 SETBP1Q9Y6X0 1596 aa15.96■□□□□ 0.14
YIPF3-215ENST00000511831 ADGRL3Q9HAR2 1447 aa15.94■□□□□ 0.14
YIPF3-215ENST00000511831 NALCNQ8IZF0 1738 aa15.94■□□□□ 0.14
YIPF3-215ENST00000511831 NGLY1Q96IV0 654 aa15.94■□□□□ 0.14
YIPF3-215ENST00000511831 NUP155O75694 1391 aa15.94■□□□□ 0.14
YIPF3-215ENST00000511831 ZNF326Q5BKZ1 582 aaKnown RBP15.93■□□□□ 0.14
YIPF3-215ENST00000511831 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
YIPF3-215ENST00000511831 ATAD2Q6PL18 1390 aa15.9■□□□□ 0.14
YIPF3-215ENST00000511831 ITGAEP38570 1179 aa15.89■□□□□ 0.13
YIPF3-215ENST00000511831 USP21Q9UK80 565 aa15.89■□□□□ 0.13
YIPF3-215ENST00000511831 ROCK1Q13464 1354 aa15.88■□□□□ 0.13
YIPF3-215ENST00000511831 ORAI2Q96SN7 254 aa15.88■□□□□ 0.13
YIPF3-215ENST00000511831 SPHKAPQ2M3C7 1700 aa15.88■□□□□ 0.13
YIPF3-215ENST00000511831 NEXMIFQ5QGS0 1516 aa15.87■□□□□ 0.13
YIPF3-215ENST00000511831 CLTCL1P53675 1640 aa15.86■□□□□ 0.13
YIPF3-215ENST00000511831 EP400Q96L91 3159 aa15.85■□□□□ 0.13
YIPF3-215ENST00000511831 TRPC5Q9UL62 973 aaPredicted RBP15.85■□□□□ 0.13
YIPF3-215ENST00000511831 ATRNO75882 1429 aa15.85■□□□□ 0.13
YIPF3-215ENST00000511831 SOS2Q07890 1332 aaPredicted RBP15.84■□□□□ 0.13
YIPF3-215ENST00000511831 ROBO2Q9HCK4 1378 aa15.84■□□□□ 0.13
YIPF3-215ENST00000511831 LAMC1P11047 1609 aa15.83■□□□□ 0.13
YIPF3-215ENST00000511831 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.12
YIPF3-215ENST00000511831 PTCH1Q13635 1447 aa15.82■□□□□ 0.12
YIPF3-215ENST00000511831 FNBP4Q8N3X1 1017 aaPredicted RBP15.81■□□□□ 0.12
YIPF3-215ENST00000511831 COL22A1Q8NFW1 1626 aaPredicted RBP15.79■□□□□ 0.12
YIPF3-215ENST00000511831 MYOM2P54296 1465 aa15.79■□□□□ 0.12
YIPF3-215ENST00000511831 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
YIPF3-215ENST00000511831 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
YIPF3-215ENST00000511831 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms