RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.62
SMN2-210ENST00000511812 MYO5BQ9ULV0 1848 aa25.14■■□□□ 1.62
SMN2-210ENST00000511812 ZFYVE9O95405 1425 aa25.14■■□□□ 1.62
SMN2-210ENST00000511812 SLC26A8Q96RN1 970 aa25.13■■□□□ 1.61
SMN2-210ENST00000511812 ZNF326Q5BKZ1 582 aaKnown RBP25.12■■□□□ 1.61
SMN2-210ENST00000511812 SENP3Q9H4L4 574 aaPredicted RBP25.12■■□□□ 1.61
SMN2-210ENST00000511812 PLEKHG1Q9ULL1 1385 aa25.11■■□□□ 1.61
SMN2-210ENST00000511812 SETD5Q9C0A6 1442 aa25.11■■□□□ 1.61
SMN2-210ENST00000511812 NUTM2DQ5VT03 806 aaPredicted RBP25.1■■□□□ 1.61
SMN2-210ENST00000511812 TRPM2O94759 1503 aa25.09■■□□□ 1.61
SMN2-210ENST00000511812 TOM1O60784 492 aa25.07■■□□□ 1.6
SMN2-210ENST00000511812 KCNA6P17658 529 aa25.06■■□□□ 1.6
SMN2-210ENST00000511812 MPHOSPH9Q99550 1183 aa25.06■■□□□ 1.6
SMN2-210ENST00000511812 LRRC7Q96NW7 1537 aa25.05■■□□□ 1.6
SMN2-210ENST00000511812 STRCP1A6NGW2 1772 aa25.05■■□□□ 1.6
SMN2-210ENST00000511812 CLTCL1P53675 1640 aa25.04■■□□□ 1.6
SMN2-210ENST00000511812 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
SMN2-210ENST00000511812 FOXD1Q16676 465 aa25.02■■□□□ 1.6
SMN2-210ENST00000511812 TBX22Q9Y458 520 aa25.02■■□□□ 1.6
SMN2-210ENST00000511812 RAB3GAP2Q9H2M9 1393 aa25■■□□□ 1.59
SMN2-210ENST00000511812 KIF1BO60333 1816 aa24.99■■□□□ 1.59
SMN2-210ENST00000511812 PIP4K2BP78356 416 aa24.99■■□□□ 1.59
SMN2-210ENST00000511812 PROSER2Q86WR7 435 aaPredicted RBP24.99■■□□□ 1.59
SMN2-210ENST00000511812 CCDC144AA2RUR9 1427 aa24.95■■□□□ 1.59
SMN2-210ENST00000511812 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
SMN2-210ENST00000511812 TMEM94Q12767 1356 aa24.94■■□□□ 1.58
SMN2-210ENST00000511812 DIP2AQ14689 1571 aa24.94■■□□□ 1.58
SMN2-210ENST00000511812 NKTRP30414 1462 aaKnown RBP24.94■■□□□ 1.58
SMN2-210ENST00000511812 NWD1Q149M9 1564 aa24.93■■□□□ 1.58
SMN2-210ENST00000511812 PIK3R4Q99570 1358 aa24.93■■□□□ 1.58
SMN2-210ENST00000511812 RPGRIP1LQ68CZ1 1315 aa24.92■■□□□ 1.58
SMN2-210ENST00000511812 VGFO15240 615 aaPredicted RBP24.92■■□□□ 1.58
SMN2-210ENST00000511812 NEXMIFQ5QGS0 1516 aa24.91■■□□□ 1.58
SMN2-210ENST00000511812 RBM33Q96EV2 1170 aaKnown RBP24.89■■□□□ 1.58
SMN2-210ENST00000511812 HRCP23327 699 aa24.88■■□□□ 1.57
SMN2-210ENST00000511812 CHD2O14647 1828 aaKnown RBP24.88■■□□□ 1.57
SMN2-210ENST00000511812 SETBP1Q9Y6X0 1596 aa24.87■■□□□ 1.57
SMN2-210ENST00000511812 RGL3Q3MIN7 710 aa24.86■■□□□ 1.57
SMN2-210ENST00000511812 AMOTL2Q9Y2J4 779 aa24.86■■□□□ 1.57
SMN2-210ENST00000511812 C14orf37Q86TY3 774 aa24.85■■□□□ 1.57
SMN2-210ENST00000511812 MSH6P52701 1360 aa24.84■■□□□ 1.57
SMN2-210ENST00000511812 XIRP1Q702N8 1843 aaKnown RBP24.84■■□□□ 1.57
SMN2-210ENST00000511812 HSPA1LP34931 641 aa24.82■■□□□ 1.56
SMN2-210ENST00000511812 NRXN3Q9Y4C0 1643 aa24.82■■□□□ 1.56
SMN2-210ENST00000511812 ALKQ9UM73 1620 aa24.81■■□□□ 1.56
SMN2-210ENST00000511812 NCOA3Q9Y6Q9 1424 aa24.79■■□□□ 1.56
SMN2-210ENST00000511812 METP08581 1390 aa24.79■■□□□ 1.56
SMN2-210ENST00000511812 SPATA31E1Q6ZUB1 1445 aa24.78■■□□□ 1.56
SMN2-210ENST00000511812 PTPRUQ92729 1446 aa24.78■■□□□ 1.56
SMN2-210ENST00000511812 ANKRD30BQ9BXX2 1392 aa24.77■■□□□ 1.56
SMN2-210ENST00000511812 PPLO60437 1756 aa24.77■■□□□ 1.56
SMN2-210ENST00000511812 C19orf44Q9H6X5 657 aa24.73■■□□□ 1.55
SMN2-210ENST00000511812 ADGRF5Q8IZF2 1346 aa24.72■■□□□ 1.55
SMN2-210ENST00000511812 ATF3P18847 181 aa24.72■■□□□ 1.55
SMN2-210ENST00000511812 FAM135BQ49AJ0 1406 aa24.71■■□□□ 1.55
SMN2-210ENST00000511812 CADPS2Q86UW7 1296 aa24.71■■□□□ 1.55
SMN2-210ENST00000511812 SLAIN2Q9P270 581 aa24.71■■□□□ 1.55
SMN2-210ENST00000511812 XRN1Q8IZH2 1706 aaKnown RBP24.71■■□□□ 1.55
SMN2-210ENST00000511812 DISP3Q9P2K9 1392 aa24.67■■□□□ 1.54
SMN2-210ENST00000511812 IFT172Q9UG01 1749 aa24.64■■□□□ 1.54
SMN2-210ENST00000511812 SETD1AO15047 1707 aaKnown RBP24.63■■□□□ 1.53
SMN2-210ENST00000511812 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.63■■□□□ 1.53
SMN2-210ENST00000511812 ROBO1Q9Y6N7 1651 aa24.62■■□□□ 1.53
SMN2-210ENST00000511812 PTCH1Q13635 1447 aa24.62■■□□□ 1.53
SMN2-210ENST00000511812 PIK3C2GO75747 1445 aa24.61■■□□□ 1.53
SMN2-210ENST00000511812 DCCP43146 1447 aa24.61■■□□□ 1.53
SMN2-210ENST00000511812 ADGRL3Q9HAR2 1447 aa24.6■■□□□ 1.53
SMN2-210ENST00000511812 MYOM2P54296 1465 aa24.59■■□□□ 1.53
SMN2-210ENST00000511812 ROBO2Q9HCK4 1378 aa24.59■■□□□ 1.53
SMN2-210ENST00000511812 STK26Q9P289 416 aa24.59■■□□□ 1.53
SMN2-210ENST00000511812 TMEM132EQ6IEE7 984 aa24.57■■□□□ 1.52
SMN2-210ENST00000511812 C14orf93Q9H972 538 aaKnown RBP24.57■■□□□ 1.52
SMN2-210ENST00000511812 KDM2AQ9Y2K7 1162 aa24.57■■□□□ 1.52
SMN2-210ENST00000511812 PRAG1Q86YV5 1406 aa24.56■■□□□ 1.52
SMN2-210ENST00000511812 DCAF11Q8TEB1 546 aa24.56■■□□□ 1.52
SMN2-210ENST00000511812 STAC3Q96MF2 364 aa24.55■■□□□ 1.52
SMN2-210ENST00000511812 LRPPRCP42704 1394 aaKnown RBP24.54■■□□□ 1.52
SMN2-210ENST00000511812 NRXN1Q9ULB1 1477 aa24.54■■□□□ 1.52
SMN2-210ENST00000511812 CFAP70Q5T0N1 1121 aa24.54■■□□□ 1.52
SMN2-210ENST00000511812 DHX57Q6P158 1386 aaKnown RBP24.52■■□□□ 1.52
SMN2-210ENST00000511812 ABCC11Q96J66 1382 aa24.52■■□□□ 1.52
SMN2-210ENST00000511812 TRIM26Q12899 539 aaPredicted RBP24.51■■□□□ 1.51
SMN2-210ENST00000511812 MST1RQ04912 1400 aa24.51■■□□□ 1.51
SMN2-210ENST00000511812 YTHDC2Q9H6S0 1430 aaKnown RBP24.51■■□□□ 1.51
SMN2-210ENST00000511812 NALCNQ8IZF0 1738 aa24.5■■□□□ 1.51
SMN2-210ENST00000511812 BRINP3Q76B58 766 aa24.5■■□□□ 1.51
SMN2-210ENST00000511812 TECPR2O15040 1411 aa24.5■■□□□ 1.51
SMN2-210ENST00000511812 LAMC1P11047 1609 aa24.5■■□□□ 1.51
SMN2-210ENST00000511812 MED1Q15648 1581 aaPredicted RBP24.49■■□□□ 1.51
SMN2-210ENST00000511812 PHLPP1O60346 1717 aa24.48■■□□□ 1.51
SMN2-210ENST00000511812 ASXL1Q8IXJ9 1541 aa24.48■■□□□ 1.51
SMN2-210ENST00000511812 WAPLQ7Z5K2 1190 aa24.47■■□□□ 1.51
SMN2-210ENST00000511812 PHF23Q9BUL5 403 aaPredicted RBP24.47■■□□□ 1.51
SMN2-210ENST00000511812 SIRT1Q96EB6 747 aa24.45■■□□□ 1.5
SMN2-210ENST00000511812 KNDC1Q76NI1 1749 aa24.44■■□□□ 1.5
SMN2-210ENST00000511812 JCADQ9P266 1359 aa24.43■■□□□ 1.5
SMN2-210ENST00000511812 C1orf167Q5SNV9 1468 aa24.43■■□□□ 1.5
SMN2-210ENST00000511812 AHDC1Q5TGY3 1603 aaPredicted RBP24.43■■□□□ 1.5
SMN2-210ENST00000511812 PLEKHH1Q9ULM0 1364 aa24.42■■□□□ 1.5
SMN2-210ENST00000511812 POGKQ9P215 609 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms