RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 MYOM2P54296 1465 aa19.2■□□□□ 0.66
LETM1-204ENST00000510940 MYO5BQ9ULV0 1848 aa19.2■□□□□ 0.66
LETM1-204ENST00000510940 UBR1Q8IWV7 1749 aa19.2■□□□□ 0.66
LETM1-204ENST00000510940 IFT172Q9UG01 1749 aa19.19■□□□□ 0.66
LETM1-204ENST00000510940 PPLO60437 1756 aa19.19■□□□□ 0.66
LETM1-204ENST00000510940 ZNF142P52746 1687 aaPredicted RBP19.18■□□□□ 0.66
LETM1-204ENST00000510940 CEP170BQ9Y4F5 1589 aaPredicted RBP19.18■□□□□ 0.66
LETM1-204ENST00000510940 ZFYVE9O95405 1425 aa19.17■□□□□ 0.66
LETM1-204ENST00000510940 PRAG1Q86YV5 1406 aa19.16■□□□□ 0.66
LETM1-204ENST00000510940 NEXMIFQ5QGS0 1516 aa19.15■□□□□ 0.66
LETM1-204ENST00000510940 EID1Q9Y6B2 187 aa19.15■□□□□ 0.66
LETM1-204ENST00000510940 RIMS2Q9UQ26 1411 aa19.15■□□□□ 0.66
LETM1-204ENST00000510940 TMEM2Q9UHN6 1383 aa19.14■□□□□ 0.65
LETM1-204ENST00000510940 DMRT2Q9Y5R5 561 aa19.12■□□□□ 0.65
LETM1-204ENST00000510940 KIAA1210Q9ULL0 1709 aa19.11■□□□□ 0.65
LETM1-204ENST00000510940 SLIT1O75093 1534 aa19.11■□□□□ 0.65
LETM1-204ENST00000510940 NRXN1Q9ULB1 1477 aa19.11■□□□□ 0.65
LETM1-204ENST00000510940 RALGAPBQ86X10 1494 aa19.09■□□□□ 0.65
LETM1-204ENST00000510940 NBPF8Q3BBV2 869 aa19.09■□□□□ 0.65
LETM1-204ENST00000510940 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
LETM1-204ENST00000510940 LAMC1P11047 1609 aa19.08■□□□□ 0.65
LETM1-204ENST00000510940 ADGRF5Q8IZF2 1346 aa19.08■□□□□ 0.65
LETM1-204ENST00000510940 PIK3C2GO75747 1445 aa19.08■□□□□ 0.64
LETM1-204ENST00000510940 ROCK2O75116 1388 aaKnown RBP19.07■□□□□ 0.64
LETM1-204ENST00000510940 TXNDC2Q86VQ3 553 aa19.07■□□□□ 0.64
LETM1-204ENST00000510940 ANKLE2Q86XL3 938 aa19.07■□□□□ 0.64
LETM1-204ENST00000510940 TRPM1Q7Z4N2 1603 aa19.07■□□□□ 0.64
LETM1-204ENST00000510940 LMTK3Q96Q04 1460 aa19.06■□□□□ 0.64
LETM1-204ENST00000510940 SCAF11Q99590 1463 aaKnown RBP19.04■□□□□ 0.64
LETM1-204ENST00000510940 C14orf93Q9H972 538 aaKnown RBP19.04■□□□□ 0.64
LETM1-204ENST00000510940 PLEKHG1Q9ULL1 1385 aa19.04■□□□□ 0.64
LETM1-204ENST00000510940 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
LETM1-204ENST00000510940 CARD11Q9BXL7 1154 aa19.03■□□□□ 0.64
LETM1-204ENST00000510940 GPRASP1Q5JY77 1395 aa19.03■□□□□ 0.64
LETM1-204ENST00000510940 BCANQ96GW7 911 aa19.02■□□□□ 0.64
LETM1-204ENST00000510940 SETBP1Q9Y6X0 1596 aa19.02■□□□□ 0.63
LETM1-204ENST00000510940 EIF4G2P78344 907 aaKnown RBP eCLIP19.01■□□□□ 0.63
LETM1-204ENST00000510940 LTKP29376 864 aa18.99■□□□□ 0.63
LETM1-204ENST00000510940 CFAP70Q5T0N1 1121 aa18.99■□□□□ 0.63
LETM1-204ENST00000510940 EIF3AQ14152 1382 aaKnown RBP18.98■□□□□ 0.63
LETM1-204ENST00000510940 HSPA2P54652 639 aa18.98■□□□□ 0.63
LETM1-204ENST00000510940 DIP2AQ14689 1571 aa18.98■□□□□ 0.63
LETM1-204ENST00000510940 ALKQ9UM73 1620 aa18.97■□□□□ 0.63
LETM1-204ENST00000510940 POLR1AO95602 1720 aaPredicted RBP18.97■□□□□ 0.63
LETM1-204ENST00000510940 SLC24A1O60721 1099 aa18.96■□□□□ 0.63
LETM1-204ENST00000510940 NBPF1Q3BBV0 1214 aa18.96■□□□□ 0.63
LETM1-204ENST00000510940 USP47Q96K76 1375 aa18.94■□□□□ 0.62
LETM1-204ENST00000510940 TBX22Q9Y458 520 aa18.94■□□□□ 0.62
LETM1-204ENST00000510940 MED14O60244 1454 aa18.93■□□□□ 0.62
LETM1-204ENST00000510940 IQGAP1P46940 1657 aa18.92■□□□□ 0.62
LETM1-204ENST00000510940 PIK3R4Q99570 1358 aa18.92■□□□□ 0.62
LETM1-204ENST00000510940 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
LETM1-204ENST00000510940 NRXN3Q9Y4C0 1643 aa18.91■□□□□ 0.62
LETM1-204ENST00000510940 ADGRB1O14514 1584 aa18.9■□□□□ 0.62
LETM1-204ENST00000510940 ADAMTS13Q76LX8 1427 aa18.9■□□□□ 0.62
LETM1-204ENST00000510940 ZNF316A6NFI3 1004 aaPredicted RBP18.89■□□□□ 0.61
LETM1-204ENST00000510940 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.61
LETM1-204ENST00000510940 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
LETM1-204ENST00000510940 LRPPRCP42704 1394 aaKnown RBP18.88■□□□□ 0.61
LETM1-204ENST00000510940 YTHDC2Q9H6S0 1430 aaKnown RBP18.88■□□□□ 0.61
LETM1-204ENST00000510940 TMEM132EQ6IEE7 984 aa18.87■□□□□ 0.61
LETM1-204ENST00000510940 ABCC11Q96J66 1382 aa18.86■□□□□ 0.61
LETM1-204ENST00000510940 NCKAP5LQ9HCH0 1330 aa18.86■□□□□ 0.61
LETM1-204ENST00000510940 SIRT1Q96EB6 747 aa18.85■□□□□ 0.61
LETM1-204ENST00000510940 SLC26A8Q96RN1 970 aa18.85■□□□□ 0.61
LETM1-204ENST00000510940 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
LETM1-204ENST00000510940 TRAK1Q9UPV9 953 aa18.84■□□□□ 0.61
LETM1-204ENST00000510940 DLC1Q96QB1 1528 aa18.84■□□□□ 0.61
LETM1-204ENST00000510940 KNDC1Q76NI1 1749 aa18.83■□□□□ 0.61
LETM1-204ENST00000510940 METP08581 1390 aa18.83■□□□□ 0.61
LETM1-204ENST00000510940 CENPJQ9HC77 1338 aaPredicted RBP18.83■□□□□ 0.61
LETM1-204ENST00000510940 ST20-MTHFSA0A0A6YYL1 179 aa18.83■□□□□ 0.6
LETM1-204ENST00000510940 STK26Q9P289 416 aa18.83■□□□□ 0.6
LETM1-204ENST00000510940 ASXL1Q8IXJ9 1541 aa18.83■□□□□ 0.6
LETM1-204ENST00000510940 POGKQ9P215 609 aa18.82■□□□□ 0.6
LETM1-204ENST00000510940 TECPR2O15040 1411 aa18.82■□□□□ 0.6
LETM1-204ENST00000510940 CDCA8Q53HL2 280 aa18.81■□□□□ 0.6
LETM1-204ENST00000510940 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
LETM1-204ENST00000510940 TMF1P82094 1093 aa18.8■□□□□ 0.6
LETM1-204ENST00000510940 FAM135BQ49AJ0 1406 aa18.8■□□□□ 0.6
LETM1-204ENST00000510940 ARHGEF28Q8N1W1 1705 aaKnown RBP18.8■□□□□ 0.6
LETM1-204ENST00000510940 AMOTL2Q9Y2J4 779 aa18.78■□□□□ 0.6
LETM1-204ENST00000510940 CHD2O14647 1828 aaKnown RBP18.78■□□□□ 0.6
LETM1-204ENST00000510940 CPS1P31327 1500 aa18.78■□□□□ 0.6
LETM1-204ENST00000510940 STRCQ7RTU9 1775 aa18.78■□□□□ 0.6
LETM1-204ENST00000510940 PTCH1Q13635 1447 aa18.77■□□□□ 0.6
LETM1-204ENST00000510940 KCNA6P17658 529 aa18.76■□□□□ 0.59
LETM1-204ENST00000510940 PRAM1Q96QH2 718 aa18.76■□□□□ 0.59
LETM1-204ENST00000510940 HIRIP3Q9BW71 556 aaPredicted RBP18.76■□□□□ 0.59
LETM1-204ENST00000510940 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
LETM1-204ENST00000510940 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
LETM1-204ENST00000510940 TESK2Q96S53 571 aa18.74■□□□□ 0.59
LETM1-204ENST00000510940 PTPRUQ92729 1446 aa18.73■□□□□ 0.59
LETM1-204ENST00000510940 EVC2Q86UK5 1308 aa18.73■□□□□ 0.59
LETM1-204ENST00000510940 PUS7Q96PZ0 661 aaKnown RBP18.72■□□□□ 0.59
LETM1-204ENST00000510940 NWD1Q149M9 1564 aa18.72■□□□□ 0.59
LETM1-204ENST00000510940 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
LETM1-204ENST00000510940 CCDC7Q96M83 1385 aa18.69■□□□□ 0.58
LETM1-204ENST00000510940 ROBO2Q9HCK4 1378 aa18.69■□□□□ 0.58
LETM1-204ENST00000510940 WAPLQ7Z5K2 1190 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms