RNA–Protein interactions for RNA: ENST00000510809.1

ITGA3-212, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 518 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-212ENST00000510809 RPGRIP1LQ68CZ1 1315 aa23.27■■□□□ 1.32
ITGA3-212ENST00000510809 ZFYVE9O95405 1425 aa23.26■■□□□ 1.31
ITGA3-212ENST00000510809 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
ITGA3-212ENST00000510809 TIMELESSQ9UNS1 1208 aa23.26■■□□□ 1.31
ITGA3-212ENST00000510809 POLR1AO95602 1720 aaPredicted RBP23.25■■□□□ 1.31
ITGA3-212ENST00000510809 L3MBTL2Q969R5 705 aa23.22■■□□□ 1.31
ITGA3-212ENST00000510809 SCAF11Q99590 1463 aaKnown RBP23.21■■□□□ 1.31
ITGA3-212ENST00000510809 STAC3Q96MF2 364 aa23.2■■□□□ 1.3
ITGA3-212ENST00000510809 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
ITGA3-212ENST00000510809 DCAF11Q8TEB1 546 aa23.19■■□□□ 1.3
ITGA3-212ENST00000510809 NRXN1Q9ULB1 1477 aa23.18■■□□□ 1.3
ITGA3-212ENST00000510809 HDGFP51858 240 aaKnown RBP23.18■■□□□ 1.3
ITGA3-212ENST00000510809 PPP1R15AO75807 674 aaPredicted RBP23.17■■□□□ 1.3
ITGA3-212ENST00000510809 EID1Q9Y6B2 187 aa23.17■■□□□ 1.3
ITGA3-212ENST00000510809 LAMC1P11047 1609 aa23.16■■□□□ 1.3
ITGA3-212ENST00000510809 VGFO15240 615 aaPredicted RBP23.15■■□□□ 1.3
ITGA3-212ENST00000510809 SETBP1Q9Y6X0 1596 aa23.14■■□□□ 1.3
ITGA3-212ENST00000510809 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
ITGA3-212ENST00000510809 PIK3C2GO75747 1445 aa23.14■■□□□ 1.29
ITGA3-212ENST00000510809 PRAG1Q86YV5 1406 aa23.14■■□□□ 1.29
ITGA3-212ENST00000510809 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
ITGA3-212ENST00000510809 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
ITGA3-212ENST00000510809 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
ITGA3-212ENST00000510809 PLEKHG1Q9ULL1 1385 aa23.13■■□□□ 1.29
ITGA3-212ENST00000510809 TXNDC2Q86VQ3 553 aa23.12■■□□□ 1.29
ITGA3-212ENST00000510809 ANKLE2Q86XL3 938 aa23.12■■□□□ 1.29
ITGA3-212ENST00000510809 KIAA1210Q9ULL0 1709 aa23.12■■□□□ 1.29
ITGA3-212ENST00000510809 NRXN3Q9Y4C0 1643 aa23.11■■□□□ 1.29
ITGA3-212ENST00000510809 HSPA2P54652 639 aa23.11■■□□□ 1.29
ITGA3-212ENST00000510809 NUTM2DQ5VT03 806 aaPredicted RBP23.11■■□□□ 1.29
ITGA3-212ENST00000510809 ADGRF5Q8IZF2 1346 aa23.1■■□□□ 1.29
ITGA3-212ENST00000510809 LTKP29376 864 aa23.1■■□□□ 1.29
ITGA3-212ENST00000510809 TRPM1Q7Z4N2 1603 aa23.1■■□□□ 1.29
ITGA3-212ENST00000510809 MED14O60244 1454 aa23.1■■□□□ 1.29
ITGA3-212ENST00000510809 DIP2AQ14689 1571 aa23.1■■□□□ 1.29
ITGA3-212ENST00000510809 STRCQ7RTU9 1775 aa23.09■■□□□ 1.29
ITGA3-212ENST00000510809 SETD1AO15047 1707 aaKnown RBP23.07■■□□□ 1.28
ITGA3-212ENST00000510809 NPHP4O75161 1426 aaPredicted RBP23.07■■□□□ 1.28
ITGA3-212ENST00000510809 RALGAPBQ86X10 1494 aa23.06■■□□□ 1.28
ITGA3-212ENST00000510809 ALKQ9UM73 1620 aa23.05■■□□□ 1.28
ITGA3-212ENST00000510809 NCKAP5LQ9HCH0 1330 aa23.03■■□□□ 1.28
ITGA3-212ENST00000510809 ADAMTS13Q76LX8 1427 aa23.02■■□□□ 1.28
ITGA3-212ENST00000510809 BCANQ96GW7 911 aa23.01■■□□□ 1.27
ITGA3-212ENST00000510809 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
ITGA3-212ENST00000510809 ASXL1Q8IXJ9 1541 aa22.99■■□□□ 1.27
ITGA3-212ENST00000510809 ADGRB1O14514 1584 aa22.98■■□□□ 1.27
ITGA3-212ENST00000510809 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
ITGA3-212ENST00000510809 C14orf93Q9H972 538 aaKnown RBP22.97■■□□□ 1.27
ITGA3-212ENST00000510809 CFAP70Q5T0N1 1121 aa22.96■■□□□ 1.27
ITGA3-212ENST00000510809 ROCK2O75116 1388 aaKnown RBP22.96■■□□□ 1.27
ITGA3-212ENST00000510809 GPRASP1Q5JY77 1395 aa22.94■■□□□ 1.26
ITGA3-212ENST00000510809 SLC26A8Q96RN1 970 aa22.93■■□□□ 1.26
ITGA3-212ENST00000510809 TBX22Q9Y458 520 aa22.93■■□□□ 1.26
ITGA3-212ENST00000510809 KNDC1Q76NI1 1749 aa22.93■■□□□ 1.26
ITGA3-212ENST00000510809 PIK3R4Q99570 1358 aa22.92■■□□□ 1.26
ITGA3-212ENST00000510809 XRN1Q8IZH2 1706 aaKnown RBP22.91■■□□□ 1.26
ITGA3-212ENST00000510809 METP08581 1390 aa22.9■■□□□ 1.26
ITGA3-212ENST00000510809 NWD1Q149M9 1564 aa22.9■■□□□ 1.26
ITGA3-212ENST00000510809 DMRT2Q9Y5R5 561 aa22.9■■□□□ 1.26
ITGA3-212ENST00000510809 CHD2O14647 1828 aaKnown RBP22.89■■□□□ 1.25
ITGA3-212ENST00000510809 NBPF1Q3BBV0 1214 aa22.88■■□□□ 1.25
ITGA3-212ENST00000510809 YTHDC2Q9H6S0 1430 aaKnown RBP22.88■■□□□ 1.25
ITGA3-212ENST00000510809 ARHGEF28Q8N1W1 1705 aaKnown RBP22.87■■□□□ 1.25
ITGA3-212ENST00000510809 LRPPRCP42704 1394 aaKnown RBP22.87■■□□□ 1.25
ITGA3-212ENST00000510809 CPS1P31327 1500 aa22.87■■□□□ 1.25
ITGA3-212ENST00000510809 CARD11Q9BXL7 1154 aa22.86■■□□□ 1.25
ITGA3-212ENST00000510809 DLC1Q96QB1 1528 aa22.86■■□□□ 1.25
ITGA3-212ENST00000510809 TECPR2O15040 1411 aa22.85■■□□□ 1.25
ITGA3-212ENST00000510809 TMEM132EQ6IEE7 984 aa22.85■■□□□ 1.25
ITGA3-212ENST00000510809 PTPRUQ92729 1446 aa22.83■■□□□ 1.25
ITGA3-212ENST00000510809 EIF3AQ14152 1382 aaKnown RBP22.83■■□□□ 1.25
ITGA3-212ENST00000510809 PTCH1Q13635 1447 aa22.82■■□□□ 1.24
ITGA3-212ENST00000510809 NKTRP30414 1462 aaKnown RBP22.82■■□□□ 1.24
ITGA3-212ENST00000510809 ABCC11Q96J66 1382 aa22.81■■□□□ 1.24
ITGA3-212ENST00000510809 USP47Q96K76 1375 aa22.81■■□□□ 1.24
ITGA3-212ENST00000510809 STRCP1A6NGW2 1772 aa22.79■■□□□ 1.24
ITGA3-212ENST00000510809 STK26Q9P289 416 aa22.78■■□□□ 1.24
ITGA3-212ENST00000510809 QRICH2Q9H0J4 1663 aa22.77■■□□□ 1.24
ITGA3-212ENST00000510809 FAM135BQ49AJ0 1406 aa22.77■■□□□ 1.24
ITGA3-212ENST00000510809 KCNA6P17658 529 aa22.77■■□□□ 1.24
ITGA3-212ENST00000510809 AMOTL2Q9Y2J4 779 aa22.77■■□□□ 1.24
ITGA3-212ENST00000510809 TRAK1Q9UPV9 953 aa22.76■■□□□ 1.23
ITGA3-212ENST00000510809 ROBO2Q9HCK4 1378 aa22.74■■□□□ 1.23
ITGA3-212ENST00000510809 EIF4G2P78344 907 aaKnown RBP eCLIP22.73■■□□□ 1.23
ITGA3-212ENST00000510809 ZNF335Q9H4Z2 1342 aaPredicted RBP22.72■■□□□ 1.23
ITGA3-212ENST00000510809 SIRT1Q96EB6 747 aa22.71■■□□□ 1.23
ITGA3-212ENST00000510809 CENPJQ9HC77 1338 aaPredicted RBP22.7■■□□□ 1.22
ITGA3-212ENST00000510809 PRAM1Q96QH2 718 aa22.69■■□□□ 1.22
ITGA3-212ENST00000510809 ADGRB2O60241 1585 aa22.68■■□□□ 1.22
ITGA3-212ENST00000510809 SBNO2Q9Y2G9 1366 aa22.68■■□□□ 1.22
ITGA3-212ENST00000510809 POGKQ9P215 609 aa22.68■■□□□ 1.22
ITGA3-212ENST00000510809 NALCNQ8IZF0 1738 aa22.68■■□□□ 1.22
ITGA3-212ENST00000510809 PLEKHH1Q9ULM0 1364 aa22.67■■□□□ 1.22
ITGA3-212ENST00000510809 HSPA5P11021 654 aaKnown RBP22.67■■□□□ 1.22
ITGA3-212ENST00000510809 LTBP4Q8N2S1 1624 aa22.66■■□□□ 1.22
ITGA3-212ENST00000510809 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.65■■□□□ 1.22
ITGA3-212ENST00000510809 ST20-MTHFSA0A0A6YYL1 179 aa22.65■■□□□ 1.22
ITGA3-212ENST00000510809 LRRC7Q96NW7 1537 aa22.65■■□□□ 1.22
ITGA3-212ENST00000510809 XIRP1Q702N8 1843 aaKnown RBP22.64■■□□□ 1.22
ITGA3-212ENST00000510809 ADGRL3Q9HAR2 1447 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms