RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 NWD1Q149M9 1564 aa30.74■■■□□ 2.51
TRIO-215ENST00000510281 PROSER2Q86WR7 435 aaPredicted RBP30.71■■■□□ 2.51
TRIO-215ENST00000510281 RPRD2Q5VT52 1461 aaKnown RBP30.7■■■□□ 2.51
TRIO-215ENST00000510281 RRBP1Q9P2E9 1410 aaKnown RBP30.69■■■□□ 2.5
TRIO-215ENST00000510281 ROCK1Q13464 1354 aa30.68■■■□□ 2.5
TRIO-215ENST00000510281 ROBO1Q9Y6N7 1651 aa30.68■■■□□ 2.5
TRIO-215ENST00000510281 ZFYVE9O95405 1425 aa30.65■■■□□ 2.5
TRIO-215ENST00000510281 RBM33Q96EV2 1170 aaKnown RBP30.64■■■□□ 2.5
TRIO-215ENST00000510281 PLEKHG1Q9ULL1 1385 aa30.63■■■□□ 2.49
TRIO-215ENST00000510281 MSH6P52701 1360 aa30.62■■■□□ 2.49
TRIO-215ENST00000510281 UNC13BO14795 1591 aa30.59■■■□□ 2.49
TRIO-215ENST00000510281 POTEAQ6S8J7 498 aa30.59■■■□□ 2.49
TRIO-215ENST00000510281 BCANQ96GW7 911 aa30.57■■■□□ 2.48
TRIO-215ENST00000510281 SLAIN2Q9P270 581 aa30.57■■■□□ 2.48
TRIO-215ENST00000510281 RIMS2Q9UQ26 1411 aa30.56■■■□□ 2.48
TRIO-215ENST00000510281 HDGFP51858 240 aaKnown RBP30.55■■■□□ 2.48
TRIO-215ENST00000510281 TMEM131LA2VDJ0 1609 aa30.55■■■□□ 2.48
TRIO-215ENST00000510281 NCOA3Q9Y6Q9 1424 aa30.53■■■□□ 2.48
TRIO-215ENST00000510281 CHD2O14647 1828 aaKnown RBP30.52■■■□□ 2.48
TRIO-215ENST00000510281 TBX22Q9Y458 520 aa30.52■■■□□ 2.48
TRIO-215ENST00000510281 JCADQ9P266 1359 aa30.51■■■□□ 2.47
TRIO-215ENST00000510281 GCC2Q8IWJ2 1684 aa30.5■■■□□ 2.47
TRIO-215ENST00000510281 PPP1R15AO75807 674 aaPredicted RBP30.5■■■□□ 2.47
TRIO-215ENST00000510281 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.48■■■□□ 2.47
TRIO-215ENST00000510281 MYO5BQ9ULV0 1848 aa30.47■■■□□ 2.47
TRIO-215ENST00000510281 PHLPP1O60346 1717 aa30.47■■■□□ 2.47
TRIO-215ENST00000510281 ADAMTS13Q76LX8 1427 aa30.47■■■□□ 2.47
TRIO-215ENST00000510281 IQGAP3Q86VI3 1631 aa30.45■■■□□ 2.47
TRIO-215ENST00000510281 PIK3R4Q99570 1358 aa30.44■■■□□ 2.46
TRIO-215ENST00000510281 COL16A1Q07092 1604 aaPredicted RBP30.44■■■□□ 2.46
TRIO-215ENST00000510281 DIP2AQ14689 1571 aa30.43■■■□□ 2.46
TRIO-215ENST00000510281 NUP155O75694 1391 aa30.41■■■□□ 2.46
TRIO-215ENST00000510281 NAIPQ13075 1403 aa30.4■■■□□ 2.46
TRIO-215ENST00000510281 E9PCH4 1651 aa30.39■■■□□ 2.46
TRIO-215ENST00000510281 CHGAP10645 457 aaKnown RBP30.37■■■□□ 2.45
TRIO-215ENST00000510281 CADPS2Q86UW7 1296 aa30.37■■■□□ 2.45
TRIO-215ENST00000510281 C19orf44Q9H6X5 657 aa30.37■■■□□ 2.45
TRIO-215ENST00000510281 SPATA31A6Q5VVP1 1343 aa30.36■■■□□ 2.45
TRIO-215ENST00000510281 AHDC1Q5TGY3 1603 aaPredicted RBP30.36■■■□□ 2.45
TRIO-215ENST00000510281 C14orf37Q86TY3 774 aa30.34■■■□□ 2.45
TRIO-215ENST00000510281 LRP6O75581 1613 aa30.33■■■□□ 2.45
TRIO-215ENST00000510281 NUTM2DQ5VT03 806 aaPredicted RBP30.33■■■□□ 2.45
TRIO-215ENST00000510281 HFM1A2PYH4 1435 aa30.32■■■□□ 2.44
TRIO-215ENST00000510281 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.32■■■□□ 2.44
TRIO-215ENST00000510281 ATF3P18847 181 aa30.31■■■□□ 2.44
TRIO-215ENST00000510281 TRPM2O94759 1503 aa30.31■■■□□ 2.44
TRIO-215ENST00000510281 PTPRUQ92729 1446 aa30.29■■■□□ 2.44
TRIO-215ENST00000510281 SETD1AO15047 1707 aaKnown RBP30.27■■■□□ 2.44
TRIO-215ENST00000510281 AMOTL2Q9Y2J4 779 aa30.27■■■□□ 2.44
TRIO-215ENST00000510281 DCCP43146 1447 aa30.26■■■□□ 2.43
TRIO-215ENST00000510281 SHPRHQ149N8 1683 aa30.26■■■□□ 2.43
TRIO-215ENST00000510281 ZNF772Q68DY9 489 aaPredicted RBP30.25■■■□□ 2.43
TRIO-215ENST00000510281 BRINP3Q76B58 766 aa30.23■■■□□ 2.43
TRIO-215ENST00000510281 SETBP1Q9Y6X0 1596 aa30.21■■■□□ 2.43
TRIO-215ENST00000510281 MEX3CQ5U5Q3 659 aaKnown RBP30.21■■■□□ 2.43
TRIO-215ENST00000510281 XRN1Q8IZH2 1706 aaKnown RBP30.19■■■□□ 2.42
TRIO-215ENST00000510281 NRXN3Q9Y4C0 1643 aa30.19■■■□□ 2.42
TRIO-215ENST00000510281 SPHKAPQ2M3C7 1700 aa30.16■■■□□ 2.42
TRIO-215ENST00000510281 ASXL1Q8IXJ9 1541 aa30.16■■■□□ 2.42
TRIO-215ENST00000510281 TRIM52Q96A61 297 aa30.15■■■□□ 2.42
TRIO-215ENST00000510281 MST1RQ04912 1400 aa30.14■■■□□ 2.42
TRIO-215ENST00000510281 SETD5Q9C0A6 1442 aa30.14■■■□□ 2.42
TRIO-215ENST00000510281 UPF1Q92900 1129 aaKnown RBP eCLIP30.12■■■□□ 2.41
TRIO-215ENST00000510281 METP08581 1390 aa30.11■■■□□ 2.41
TRIO-215ENST00000510281 CDK12Q9NYV4 1490 aaPredicted RBP30.1■■■□□ 2.41
TRIO-215ENST00000510281 NHSL1Q5SYE7 1610 aa30.08■■■□□ 2.41
TRIO-215ENST00000510281 RXRBP28702 533 aa30.08■■■□□ 2.41
TRIO-215ENST00000510281 CLTCL1P53675 1640 aa30.07■■■□□ 2.4
TRIO-215ENST00000510281 ADGRL3Q9HAR2 1447 aa30.06■■■□□ 2.4
TRIO-215ENST00000510281 ZNF326Q5BKZ1 582 aaKnown RBP30.06■■■□□ 2.4
TRIO-215ENST00000510281 NUTM2BA6NNL0 878 aaPredicted RBP30.05■■■□□ 2.4
TRIO-215ENST00000510281 NUTM2EB1AL46 878 aaPredicted RBP30.05■■■□□ 2.4
TRIO-215ENST00000510281 NUTM2AQ8IVF1 878 aaPredicted RBP30.05■■■□□ 2.4
TRIO-215ENST00000510281 LRRC59Q96AG4 307 aaKnown RBP30.04■■■□□ 2.4
TRIO-215ENST00000510281 SLC4A1APQ9BWU0 796 aaKnown RBP30.04■■■□□ 2.4
TRIO-215ENST00000510281 NEXMIFQ5QGS0 1516 aa30.03■■■□□ 2.4
TRIO-215ENST00000510281 AFF2P51816 1311 aa30.02■■■□□ 2.4
TRIO-215ENST00000510281 PNPLA6Q8IY17 1366 aa29.98■■■□□ 2.39
TRIO-215ENST00000510281 FOXD1Q16676 465 aa29.97■■■□□ 2.39
TRIO-215ENST00000510281 NALCNQ8IZF0 1738 aa29.96■■■□□ 2.39
TRIO-215ENST00000510281 PTCH1Q13635 1447 aa29.95■■■□□ 2.38
TRIO-215ENST00000510281 DDX17Q92841 729 aaKnown RBP29.94■■■□□ 2.38
TRIO-215ENST00000510281 C1orf167Q5SNV9 1468 aa29.93■■■□□ 2.38
TRIO-215ENST00000510281 PRAG1Q86YV5 1406 aa29.92■■■□□ 2.38
TRIO-215ENST00000510281 LAMC1P11047 1609 aa29.91■■■□□ 2.38
TRIO-215ENST00000510281 RBM6P78332 1123 aaKnown RBP29.9■■■□□ 2.38
TRIO-215ENST00000510281 C8orf37Q96NL8 207 aa29.9■■■□□ 2.38
TRIO-215ENST00000510281 RGS12O14924 1447 aa29.89■■■□□ 2.38
TRIO-215ENST00000510281 MPHOSPH9Q99550 1183 aa29.89■■■□□ 2.38
TRIO-215ENST00000510281 RAB3GAP2Q9H2M9 1393 aa29.89■■■□□ 2.37
TRIO-215ENST00000510281 QTRT2Q9H974 415 aaKnown RBP29.88■■■□□ 2.37
TRIO-215ENST00000510281 KIF1BO60333 1816 aa29.87■■■□□ 2.37
TRIO-215ENST00000510281 ROBO2Q9HCK4 1378 aa29.87■■■□□ 2.37
TRIO-215ENST00000510281 VGFO15240 615 aaPredicted RBP29.86■■■□□ 2.37
TRIO-215ENST00000510281 SOS2Q07890 1332 aaPredicted RBP29.86■■■□□ 2.37
TRIO-215ENST00000510281 RPGRIP1LQ68CZ1 1315 aa29.82■■■□□ 2.36
TRIO-215ENST00000510281 ORAI2Q96SN7 254 aa29.8■■■□□ 2.36
TRIO-215ENST00000510281 NGLY1Q96IV0 654 aa29.79■■■□□ 2.36
TRIO-215ENST00000510281 CCDC144AA2RUR9 1427 aa29.79■■■□□ 2.36
TRIO-215ENST00000510281 ADAMTS2O95450 1211 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms