RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-223ENST00000510199 MYOM2P54296 1465 aa17.2■□□□□ 0.34
RACK1-223ENST00000510199 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
RACK1-223ENST00000510199 DCAF11Q8TEB1 546 aa17.2■□□□□ 0.34
RACK1-223ENST00000510199 PPP1R15AO75807 674 aaPredicted RBP17.19■□□□□ 0.34
RACK1-223ENST00000510199 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
RACK1-223ENST00000510199 ARHGAP23Q9P227 1491 aa17.18■□□□□ 0.34
RACK1-223ENST00000510199 TMEM2Q9UHN6 1383 aa17.18■□□□□ 0.34
RACK1-223ENST00000510199 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
RACK1-223ENST00000510199 RIMS2Q9UQ26 1411 aa17.18■□□□□ 0.34
RACK1-223ENST00000510199 KIAA1210Q9ULL0 1709 aa17.17■□□□□ 0.34
RACK1-223ENST00000510199 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
RACK1-223ENST00000510199 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
RACK1-223ENST00000510199 NRXN1Q9ULB1 1477 aa17.16■□□□□ 0.34
RACK1-223ENST00000510199 TRPM1Q7Z4N2 1603 aa17.15■□□□□ 0.34
RACK1-223ENST00000510199 VGFO15240 615 aaPredicted RBP17.15■□□□□ 0.34
RACK1-223ENST00000510199 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.15■□□□□ 0.34
RACK1-223ENST00000510199 PRAG1Q86YV5 1406 aa17.14■□□□□ 0.33
RACK1-223ENST00000510199 LMTK3Q96Q04 1460 aa17.14■□□□□ 0.33
RACK1-223ENST00000510199 LAMC1P11047 1609 aa17.14■□□□□ 0.33
RACK1-223ENST00000510199 ADGRF5Q8IZF2 1346 aa17.12■□□□□ 0.33
RACK1-223ENST00000510199 IQGAP1P46940 1657 aa17.11■□□□□ 0.33
RACK1-223ENST00000510199 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
RACK1-223ENST00000510199 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
RACK1-223ENST00000510199 EID1Q9Y6B2 187 aa17.11■□□□□ 0.33
RACK1-223ENST00000510199 PIK3C2GO75747 1445 aa17.11■□□□□ 0.33
RACK1-223ENST00000510199 SCAF11Q99590 1463 aaKnown RBP17.11■□□□□ 0.33
RACK1-223ENST00000510199 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
RACK1-223ENST00000510199 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
RACK1-223ENST00000510199 TXNDC2Q86VQ3 553 aa17.1■□□□□ 0.33
RACK1-223ENST00000510199 SETBP1Q9Y6X0 1596 aa17.1■□□□□ 0.33
RACK1-223ENST00000510199 LTKP29376 864 aa17.09■□□□□ 0.33
RACK1-223ENST00000510199 RALGAPBQ86X10 1494 aa17.08■□□□□ 0.32
RACK1-223ENST00000510199 ANKLE2Q86XL3 938 aa17.08■□□□□ 0.32
RACK1-223ENST00000510199 STRCQ7RTU9 1775 aa17.07■□□□□ 0.32
RACK1-223ENST00000510199 PLEKHG1Q9ULL1 1385 aa17.07■□□□□ 0.32
RACK1-223ENST00000510199 ALKQ9UM73 1620 aa17.07■□□□□ 0.32
RACK1-223ENST00000510199 MED14O60244 1454 aa17.05■□□□□ 0.32
RACK1-223ENST00000510199 DIP2AQ14689 1571 aa17.04■□□□□ 0.32
RACK1-223ENST00000510199 C14orf93Q9H972 538 aaKnown RBP17.04■□□□□ 0.32
RACK1-223ENST00000510199 HSPA2P54652 639 aa17.03■□□□□ 0.32
RACK1-223ENST00000510199 CFAP70Q5T0N1 1121 aa17.02■□□□□ 0.32
RACK1-223ENST00000510199 NPHP4O75161 1426 aaPredicted RBP17.01■□□□□ 0.31
RACK1-223ENST00000510199 ADAMTS13Q76LX8 1427 aa17.01■□□□□ 0.31
RACK1-223ENST00000510199 ROCK2O75116 1388 aaKnown RBP17.01■□□□□ 0.31
RACK1-223ENST00000510199 GPRASP1Q5JY77 1395 aa17.01■□□□□ 0.31
RACK1-223ENST00000510199 ADGRB1O14514 1584 aa17■□□□□ 0.31
RACK1-223ENST00000510199 BCANQ96GW7 911 aa17■□□□□ 0.31
RACK1-223ENST00000510199 CHD2O14647 1828 aaKnown RBP17■□□□□ 0.31
RACK1-223ENST00000510199 ASXL1Q8IXJ9 1541 aa17■□□□□ 0.31
RACK1-223ENST00000510199 NCKAP5LQ9HCH0 1330 aa16.99■□□□□ 0.31
RACK1-223ENST00000510199 NBPF1Q3BBV0 1214 aa16.99■□□□□ 0.31
RACK1-223ENST00000510199 SENP3Q9H4L4 574 aaPredicted RBP16.98■□□□□ 0.31
RACK1-223ENST00000510199 KNDC1Q76NI1 1749 aa16.98■□□□□ 0.31
RACK1-223ENST00000510199 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
RACK1-223ENST00000510199 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
RACK1-223ENST00000510199 ARHGEF28Q8N1W1 1705 aaKnown RBP16.96■□□□□ 0.31
RACK1-223ENST00000510199 CARD11Q9BXL7 1154 aa16.96■□□□□ 0.31
RACK1-223ENST00000510199 SLC26A8Q96RN1 970 aa16.95■□□□□ 0.3
RACK1-223ENST00000510199 METP08581 1390 aa16.93■□□□□ 0.3
RACK1-223ENST00000510199 PIK3R4Q99570 1358 aa16.93■□□□□ 0.3
RACK1-223ENST00000510199 TMEM132EQ6IEE7 984 aa16.93■□□□□ 0.3
RACK1-223ENST00000510199 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
RACK1-223ENST00000510199 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
RACK1-223ENST00000510199 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
RACK1-223ENST00000510199 LRPPRCP42704 1394 aaKnown RBP16.9■□□□□ 0.3
RACK1-223ENST00000510199 USP47Q96K76 1375 aa16.9■□□□□ 0.3
RACK1-223ENST00000510199 QRICH2Q9H0J4 1663 aa16.89■□□□□ 0.29
RACK1-223ENST00000510199 EIF4G2P78344 907 aaKnown RBP eCLIP16.89■□□□□ 0.29
RACK1-223ENST00000510199 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
RACK1-223ENST00000510199 CPS1P31327 1500 aa16.89■□□□□ 0.29
RACK1-223ENST00000510199 NWD1Q149M9 1564 aa16.89■□□□□ 0.29
RACK1-223ENST00000510199 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
RACK1-223ENST00000510199 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
RACK1-223ENST00000510199 TECPR2O15040 1411 aa16.88■□□□□ 0.29
RACK1-223ENST00000510199 PTPRUQ92729 1446 aa16.88■□□□□ 0.29
RACK1-223ENST00000510199 STRCP1A6NGW2 1772 aa16.88■□□□□ 0.29
RACK1-223ENST00000510199 TRAK1Q9UPV9 953 aa16.87■□□□□ 0.29
RACK1-223ENST00000510199 STK26Q9P289 416 aa16.86■□□□□ 0.29
RACK1-223ENST00000510199 HSPA5P11021 654 aaKnown RBP16.85■□□□□ 0.29
RACK1-223ENST00000510199 AMOTL2Q9Y2J4 779 aa16.85■□□□□ 0.29
RACK1-223ENST00000510199 SIRT1Q96EB6 747 aa16.84■□□□□ 0.29
RACK1-223ENST00000510199 FAM135BQ49AJ0 1406 aa16.84■□□□□ 0.29
RACK1-223ENST00000510199 ST20-MTHFSA0A0A6YYL1 179 aa16.83■□□□□ 0.28
RACK1-223ENST00000510199 KCNA6P17658 529 aa16.83■□□□□ 0.28
RACK1-223ENST00000510199 PTCH1Q13635 1447 aa16.83■□□□□ 0.28
RACK1-223ENST00000510199 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
RACK1-223ENST00000510199 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
RACK1-223ENST00000510199 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
RACK1-223ENST00000510199 SBNO2Q9Y2G9 1366 aa16.8■□□□□ 0.28
RACK1-223ENST00000510199 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
RACK1-223ENST00000510199 PRAM1Q96QH2 718 aa16.79■□□□□ 0.28
RACK1-223ENST00000510199 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
RACK1-223ENST00000510199 POGKQ9P215 609 aa16.79■□□□□ 0.28
RACK1-223ENST00000510199 XIRP1Q702N8 1843 aaKnown RBP16.79■□□□□ 0.28
RACK1-223ENST00000510199 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
RACK1-223ENST00000510199 WAPLQ7Z5K2 1190 aa16.77■□□□□ 0.28
RACK1-223ENST00000510199 TESK2Q96S53 571 aa16.77■□□□□ 0.28
RACK1-223ENST00000510199 PLEKHH1Q9ULM0 1364 aa16.77■□□□□ 0.27
RACK1-223ENST00000510199 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
RACK1-223ENST00000510199 ADGRB2O60241 1585 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms