RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 SLC26A8Q96RN1 970 aa40.53■■■■■ 4.08
SNF8-208ENST00000510195 RIMS2Q9UQ26 1411 aa40.5■■■■■ 4.07
SNF8-208ENST00000510195 PLEKHG1Q9ULL1 1385 aa40.5■■■■■ 4.07
SNF8-208ENST00000510195 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.5■■■■■ 4.07
SNF8-208ENST00000510195 MYO5BQ9ULV0 1848 aa40.5■■■■■ 4.07
SNF8-208ENST00000510195 BCANQ96GW7 911 aa40.47■■■■■ 4.07
SNF8-208ENST00000510195 PPP1R15AO75807 674 aaPredicted RBP40.46■■■■■ 4.07
SNF8-208ENST00000510195 XIRP1Q702N8 1843 aaKnown RBP40.46■■■■■ 4.07
SNF8-208ENST00000510195 CHGAP10645 457 aaKnown RBP40.44■■■■■ 4.06
SNF8-208ENST00000510195 NKTRP30414 1462 aaKnown RBP40.41■■■■■ 4.06
SNF8-208ENST00000510195 TMEM94Q12767 1356 aa40.41■■■■■ 4.06
SNF8-208ENST00000510195 ILDR2Q71H61 639 aa40.41■■■■■ 4.06
SNF8-208ENST00000510195 NWD1Q149M9 1564 aa40.4■■■■■ 4.06
SNF8-208ENST00000510195 PROSER2Q86WR7 435 aaPredicted RBP40.39■■■■■ 4.06
SNF8-208ENST00000510195 TBX22Q9Y458 520 aa40.38■■■■■ 4.05
SNF8-208ENST00000510195 NAIPQ13075 1403 aa40.37■■■■■ 4.05
SNF8-208ENST00000510195 SPHKAPQ2M3C7 1700 aa40.3■■■■■ 4.04
SNF8-208ENST00000510195 CHD2O14647 1828 aaKnown RBP40.3■■■■■ 4.04
SNF8-208ENST00000510195 FAM135BQ49AJ0 1406 aa40.29■■■■■ 4.04
SNF8-208ENST00000510195 DIP2AQ14689 1571 aa40.27■■■■■ 4.04
SNF8-208ENST00000510195 HFM1A2PYH4 1435 aa40.27■■■■■ 4.04
SNF8-208ENST00000510195 PIK3R4Q99570 1358 aa40.26■■■■■ 4.04
SNF8-208ENST00000510195 ADAMTS13Q76LX8 1427 aa40.25■■■■■ 4.03
SNF8-208ENST00000510195 SENP3Q9H4L4 574 aaPredicted RBP40.24■■■■■ 4.03
SNF8-208ENST00000510195 NUTM2DQ5VT03 806 aaPredicted RBP40.23■■■■■ 4.03
SNF8-208ENST00000510195 MED1Q15648 1581 aaPredicted RBP40.23■■■■■ 4.03
SNF8-208ENST00000510195 NCOA3Q9Y6Q9 1424 aa40.22■■■■■ 4.03
SNF8-208ENST00000510195 MSH6P52701 1360 aa40.22■■■■■ 4.03
SNF8-208ENST00000510195 SOCS7O14512 581 aa40.21■■■■■ 4.03
SNF8-208ENST00000510195 RBM33Q96EV2 1170 aaKnown RBP40.2■■■■■ 4.03
SNF8-208ENST00000510195 TRPM2O94759 1503 aa40.16■■■■■ 4.02
SNF8-208ENST00000510195 ZNF326Q5BKZ1 582 aaKnown RBP40.13■■■■■ 4.01
SNF8-208ENST00000510195 TRIM52Q96A61 297 aa40.13■■■■■ 4.01
SNF8-208ENST00000510195 SLAIN2Q9P270 581 aa40.09■■■■■ 4.01
SNF8-208ENST00000510195 CLTCL1P53675 1640 aa40.09■■■■■ 4.01
SNF8-208ENST00000510195 SETBP1Q9Y6X0 1596 aa40.07■■■■■ 4.01
SNF8-208ENST00000510195 ROBO1Q9Y6N7 1651 aa40.06■■■■■ 4
SNF8-208ENST00000510195 SLC4A1APQ9BWU0 796 aaKnown RBP40.05■■■■■ 4
SNF8-208ENST00000510195 AMOTL2Q9Y2J4 779 aa40.05■■■■■ 4
SNF8-208ENST00000510195 KIF1BO60333 1816 aa40.03■■■■■ 4
SNF8-208ENST00000510195 PHF23Q9BUL5 403 aaPredicted RBP40.01■■■■■ 4
SNF8-208ENST00000510195 C19orf44Q9H6X5 657 aa40.01■■■■■ 4
SNF8-208ENST00000510195 NRXN3Q9Y4C0 1643 aa40.01■■■■■ 4
SNF8-208ENST00000510195 C14orf37Q86TY3 774 aa40■■■■□ 3.99
SNF8-208ENST00000510195 PTPRUQ92729 1446 aa39.99■■■■□ 3.99
SNF8-208ENST00000510195 NEXMIFQ5QGS0 1516 aa39.99■■■■□ 3.99
SNF8-208ENST00000510195 CADPS2Q86UW7 1296 aa39.97■■■■□ 3.99
SNF8-208ENST00000510195 RPGRIP1LQ68CZ1 1315 aa39.92■■■■□ 3.98
SNF8-208ENST00000510195 VGFO15240 615 aaPredicted RBP39.92■■■■□ 3.98
SNF8-208ENST00000510195 ATF3P18847 181 aa39.92■■■■□ 3.98
SNF8-208ENST00000510195 XRN1Q8IZH2 1706 aaKnown RBP39.91■■■■□ 3.98
SNF8-208ENST00000510195 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.91■■■■□ 3.98
SNF8-208ENST00000510195 ACIN1Q9UKV3 1341 aaKnown RBP39.9■■■■□ 3.98
SNF8-208ENST00000510195 METP08581 1390 aa39.89■■■■□ 3.98
SNF8-208ENST00000510195 DCCP43146 1447 aa39.87■■■■□ 3.97
SNF8-208ENST00000510195 PHLPP1O60346 1717 aa39.82■■■■□ 3.97
SNF8-208ENST00000510195 MPHOSPH9Q99550 1183 aa39.78■■■■□ 3.96
SNF8-208ENST00000510195 JCADQ9P266 1359 aa39.78■■■■□ 3.96
SNF8-208ENST00000510195 FOXD1Q16676 465 aa39.74■■■■□ 3.95
SNF8-208ENST00000510195 CCDC144AA2RUR9 1427 aa39.74■■■■□ 3.95
SNF8-208ENST00000510195 COL16A1Q07092 1604 aaPredicted RBP39.72■■■■□ 3.95
SNF8-208ENST00000510195 AHDC1Q5TGY3 1603 aaPredicted RBP39.72■■■■□ 3.95
SNF8-208ENST00000510195 PPLO60437 1756 aa39.72■■■■□ 3.95
SNF8-208ENST00000510195 RGS17Q9UGC6 210 aaPredicted RBP39.71■■■■□ 3.95
SNF8-208ENST00000510195 ADGRL3Q9HAR2 1447 aa39.69■■■■□ 3.94
SNF8-208ENST00000510195 BRINP3Q76B58 766 aa39.68■■■■□ 3.94
SNF8-208ENST00000510195 SETD1AO15047 1707 aaKnown RBP39.68■■■■□ 3.94
SNF8-208ENST00000510195 PTCH1Q13635 1447 aa39.67■■■■□ 3.94
SNF8-208ENST00000510195 PRAG1Q86YV5 1406 aa39.67■■■■□ 3.94
SNF8-208ENST00000510195 SETD5Q9C0A6 1442 aa39.67■■■■□ 3.94
SNF8-208ENST00000510195 MST1RQ04912 1400 aa39.65■■■■□ 3.94
SNF8-208ENST00000510195 SPATA31E1Q6ZUB1 1445 aa39.63■■■■□ 3.93
SNF8-208ENST00000510195 SPATA31A6Q5VVP1 1343 aa39.62■■■■□ 3.93
SNF8-208ENST00000510195 ANKRD30BQ9BXX2 1392 aa39.6■■■■□ 3.93
SNF8-208ENST00000510195 ASXL1Q8IXJ9 1541 aa39.58■■■■□ 3.93
SNF8-208ENST00000510195 NALCNQ8IZF0 1738 aa39.57■■■■□ 3.93
SNF8-208ENST00000510195 ROBO2Q9HCK4 1378 aa39.57■■■■□ 3.92
SNF8-208ENST00000510195 RGL3Q3MIN7 710 aa39.56■■■■□ 3.92
SNF8-208ENST00000510195 ADGRF5Q8IZF2 1346 aa39.53■■■■□ 3.92
SNF8-208ENST00000510195 SHPRHQ149N8 1683 aa39.53■■■■□ 3.92
SNF8-208ENST00000510195 IFT172Q9UG01 1749 aa39.49■■■■□ 3.91
SNF8-208ENST00000510195 POTEAQ6S8J7 498 aa39.49■■■■□ 3.91
SNF8-208ENST00000510195 NHSL1Q5SYE7 1610 aa39.48■■■■□ 3.91
SNF8-208ENST00000510195 RAB3GAP2Q9H2M9 1393 aa39.47■■■■□ 3.91
SNF8-208ENST00000510195 C1orf167Q5SNV9 1468 aa39.46■■■■□ 3.91
SNF8-208ENST00000510195 LRRC59Q96AG4 307 aaKnown RBP39.46■■■■□ 3.91
SNF8-208ENST00000510195 PIK3C2GO75747 1445 aa39.42■■■■□ 3.9
SNF8-208ENST00000510195 LRP6O75581 1613 aa39.42■■■■□ 3.9
SNF8-208ENST00000510195 TECPR2O15040 1411 aa39.4■■■■□ 3.9
SNF8-208ENST00000510195 MEX3CQ5U5Q3 659 aaKnown RBP39.4■■■■□ 3.9
SNF8-208ENST00000510195 LRPPRCP42704 1394 aaKnown RBP39.38■■■■□ 3.89
SNF8-208ENST00000510195 ABCC11Q96J66 1382 aa39.37■■■■□ 3.89
SNF8-208ENST00000510195 HRCP23327 699 aa39.37■■■■□ 3.89
SNF8-208ENST00000510195 LAMC1P11047 1609 aa39.35■■■■□ 3.89
SNF8-208ENST00000510195 ZNF772Q68DY9 489 aaPredicted RBP39.34■■■■□ 3.89
SNF8-208ENST00000510195 CDC42BPGQ6DT37 1551 aa39.31■■■■□ 3.88
SNF8-208ENST00000510195 DDX17Q92841 729 aaKnown RBP39.31■■■■□ 3.88
SNF8-208ENST00000510195 ORAI2Q96SN7 254 aa39.31■■■■□ 3.88
SNF8-208ENST00000510195 STK26Q9P289 416 aa39.31■■■■□ 3.88
SNF8-208ENST00000510195 NRXN1Q9ULB1 1477 aa39.3■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms