RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 TRPM2O94759 1503 aa31.85■■■□□ 2.69
UBE2D3-229ENST00000510129 PPP1R15AO75807 674 aaPredicted RBP31.84■■■□□ 2.69
UBE2D3-229ENST00000510129 PLEKHG1Q9ULL1 1385 aa31.81■■■□□ 2.68
UBE2D3-229ENST00000510129 SETD5Q9C0A6 1442 aa31.8■■■□□ 2.68
UBE2D3-229ENST00000510129 BCANQ96GW7 911 aa31.79■■■□□ 2.68
UBE2D3-229ENST00000510129 UBAP1LF5GYI3 381 aa31.74■■■□□ 2.67
UBE2D3-229ENST00000510129 CLTCL1P53675 1640 aa31.74■■■□□ 2.67
UBE2D3-229ENST00000510129 STRCP1A6NGW2 1772 aa31.73■■■□□ 2.67
UBE2D3-229ENST00000510129 SLC26A8Q96RN1 970 aa31.72■■■□□ 2.67
UBE2D3-229ENST00000510129 KIF1BO60333 1816 aa31.72■■■□□ 2.67
UBE2D3-229ENST00000510129 LRRC7Q96NW7 1537 aa31.71■■■□□ 2.67
UBE2D3-229ENST00000510129 TOM1O60784 492 aa31.71■■■□□ 2.67
UBE2D3-229ENST00000510129 KCNA6P17658 529 aa31.7■■■□□ 2.67
UBE2D3-229ENST00000510129 ZNF326Q5BKZ1 582 aaKnown RBP31.7■■■□□ 2.67
UBE2D3-229ENST00000510129 DIP2AQ14689 1571 aa31.69■■■□□ 2.66
UBE2D3-229ENST00000510129 MPHOSPH9Q99550 1183 aa31.69■■■□□ 2.66
UBE2D3-229ENST00000510129 TBX22Q9Y458 520 aa31.69■■■□□ 2.66
UBE2D3-229ENST00000510129 NKTRP30414 1462 aaKnown RBP31.65■■■□□ 2.66
UBE2D3-229ENST00000510129 NWD1Q149M9 1564 aa31.64■■■□□ 2.66
UBE2D3-229ENST00000510129 RAB3GAP2Q9H2M9 1393 aa31.64■■■□□ 2.66
UBE2D3-229ENST00000510129 PIK3R4Q99570 1358 aa31.63■■■□□ 2.65
UBE2D3-229ENST00000510129 CCDC144AA2RUR9 1427 aa31.61■■■□□ 2.65
UBE2D3-229ENST00000510129 RPGRIP1LQ68CZ1 1315 aa31.61■■■□□ 2.65
UBE2D3-229ENST00000510129 HRCP23327 699 aa31.61■■■□□ 2.65
UBE2D3-229ENST00000510129 NUTM2DQ5VT03 806 aaPredicted RBP31.6■■■□□ 2.65
UBE2D3-229ENST00000510129 ADAMTS13Q76LX8 1427 aa31.59■■■□□ 2.65
UBE2D3-229ENST00000510129 SETBP1Q9Y6X0 1596 aa31.58■■■□□ 2.65
UBE2D3-229ENST00000510129 NEXMIFQ5QGS0 1516 aa31.58■■■□□ 2.65
UBE2D3-229ENST00000510129 CHD2O14647 1828 aaKnown RBP31.57■■■□□ 2.64
UBE2D3-229ENST00000510129 VGFO15240 615 aaPredicted RBP31.56■■■□□ 2.64
UBE2D3-229ENST00000510129 PROSER2Q86WR7 435 aaPredicted RBP31.56■■■□□ 2.64
UBE2D3-229ENST00000510129 FOXD1Q16676 465 aa31.55■■■□□ 2.64
UBE2D3-229ENST00000510129 TMEM94Q12767 1356 aa31.53■■■□□ 2.64
UBE2D3-229ENST00000510129 SENP3Q9H4L4 574 aaPredicted RBP31.52■■■□□ 2.64
UBE2D3-229ENST00000510129 XIRP1Q702N8 1843 aaKnown RBP31.5■■■□□ 2.63
UBE2D3-229ENST00000510129 SCAF1Q9H7N4 1312 aaKnown RBP31.49■■■□□ 2.63
UBE2D3-229ENST00000510129 NCOA3Q9Y6Q9 1424 aa31.49■■■□□ 2.63
UBE2D3-229ENST00000510129 NRXN3Q9Y4C0 1643 aa31.49■■■□□ 2.63
UBE2D3-229ENST00000510129 PIP4K2BP78356 416 aa31.48■■■□□ 2.63
UBE2D3-229ENST00000510129 PPLO60437 1756 aa31.44■■■□□ 2.62
UBE2D3-229ENST00000510129 ALKQ9UM73 1620 aa31.44■■■□□ 2.62
UBE2D3-229ENST00000510129 MSH6P52701 1360 aa31.43■■■□□ 2.62
UBE2D3-229ENST00000510129 SPATA31E1Q6ZUB1 1445 aa31.43■■■□□ 2.62
UBE2D3-229ENST00000510129 ANKRD30BQ9BXX2 1392 aa31.42■■■□□ 2.62
UBE2D3-229ENST00000510129 AMOTL2Q9Y2J4 779 aa31.41■■■□□ 2.62
UBE2D3-229ENST00000510129 XRN1Q8IZH2 1706 aaKnown RBP31.36■■■□□ 2.61
UBE2D3-229ENST00000510129 PTPRUQ92729 1446 aa31.35■■■□□ 2.61
UBE2D3-229ENST00000510129 METP08581 1390 aa31.35■■■□□ 2.61
UBE2D3-229ENST00000510129 RGL3Q3MIN7 710 aa31.35■■■□□ 2.61
UBE2D3-229ENST00000510129 C14orf37Q86TY3 774 aa31.34■■■□□ 2.61
UBE2D3-229ENST00000510129 RBM33Q96EV2 1170 aaKnown RBP31.32■■■□□ 2.6
UBE2D3-229ENST00000510129 IFT172Q9UG01 1749 aa31.32■■■□□ 2.6
UBE2D3-229ENST00000510129 FAM135BQ49AJ0 1406 aa31.32■■■□□ 2.6
UBE2D3-229ENST00000510129 HSPA1LP34931 641 aa31.31■■■□□ 2.6
UBE2D3-229ENST00000510129 C19orf44Q9H6X5 657 aa31.31■■■□□ 2.6
UBE2D3-229ENST00000510129 SETD1AO15047 1707 aaKnown RBP31.28■■■□□ 2.6
UBE2D3-229ENST00000510129 CADPS2Q86UW7 1296 aa31.28■■■□□ 2.6
UBE2D3-229ENST00000510129 PRAG1Q86YV5 1406 aa31.25■■■□□ 2.59
UBE2D3-229ENST00000510129 ATF3P18847 181 aa31.25■■■□□ 2.59
UBE2D3-229ENST00000510129 SLAIN2Q9P270 581 aa31.25■■■□□ 2.59
UBE2D3-229ENST00000510129 DCCP43146 1447 aa31.24■■■□□ 2.59
UBE2D3-229ENST00000510129 PTCH1Q13635 1447 aa31.24■■■□□ 2.59
UBE2D3-229ENST00000510129 ADGRF5Q8IZF2 1346 aa31.24■■■□□ 2.59
UBE2D3-229ENST00000510129 MYOM2P54296 1465 aa31.22■■■□□ 2.59
UBE2D3-229ENST00000510129 PIK3C2GO75747 1445 aa31.22■■■□□ 2.59
UBE2D3-229ENST00000510129 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.21■■■□□ 2.59
UBE2D3-229ENST00000510129 STAC3Q96MF2 364 aa31.2■■■□□ 2.59
UBE2D3-229ENST00000510129 ROBO1Q9Y6N7 1651 aa31.19■■■□□ 2.58
UBE2D3-229ENST00000510129 NRXN1Q9ULB1 1477 aa31.16■■■□□ 2.58
UBE2D3-229ENST00000510129 LAMC1P11047 1609 aa31.16■■■□□ 2.58
UBE2D3-229ENST00000510129 ADGRL3Q9HAR2 1447 aa31.15■■■□□ 2.58
UBE2D3-229ENST00000510129 ROBO2Q9HCK4 1378 aa31.1■■■□□ 2.57
UBE2D3-229ENST00000510129 DISP3Q9P2K9 1392 aa31.1■■■□□ 2.57
UBE2D3-229ENST00000510129 C14orf93Q9H972 538 aaKnown RBP31.1■■■□□ 2.57
UBE2D3-229ENST00000510129 TECPR2O15040 1411 aa31.09■■■□□ 2.57
UBE2D3-229ENST00000510129 LRPPRCP42704 1394 aaKnown RBP31.09■■■□□ 2.57
UBE2D3-229ENST00000510129 ABCC11Q96J66 1382 aa31.07■■■□□ 2.56
UBE2D3-229ENST00000510129 NALCNQ8IZF0 1738 aa31.07■■■□□ 2.56
UBE2D3-229ENST00000510129 KNDC1Q76NI1 1749 aa31.05■■■□□ 2.56
UBE2D3-229ENST00000510129 DCAF11Q8TEB1 546 aa31.04■■■□□ 2.56
UBE2D3-229ENST00000510129 DHX57Q6P158 1386 aaKnown RBP31.04■■■□□ 2.56
UBE2D3-229ENST00000510129 TRIM26Q12899 539 aaPredicted RBP31.03■■■□□ 2.56
UBE2D3-229ENST00000510129 YTHDC2Q9H6S0 1430 aaKnown RBP31.03■■■□□ 2.56
UBE2D3-229ENST00000510129 MST1RQ04912 1400 aa31.02■■■□□ 2.56
UBE2D3-229ENST00000510129 SIRT1Q96EB6 747 aa31.02■■■□□ 2.56
UBE2D3-229ENST00000510129 PHLPP1O60346 1717 aa31.01■■■□□ 2.56
UBE2D3-229ENST00000510129 ASXL1Q8IXJ9 1541 aa31.01■■■□□ 2.55
UBE2D3-229ENST00000510129 TMEM132EQ6IEE7 984 aa31■■■□□ 2.55
UBE2D3-229ENST00000510129 STK26Q9P289 416 aa31■■■□□ 2.55
UBE2D3-229ENST00000510129 MED1Q15648 1581 aaPredicted RBP31■■■□□ 2.55
UBE2D3-229ENST00000510129 CFAP70Q5T0N1 1121 aa30.99■■■□□ 2.55
UBE2D3-229ENST00000510129 AHDC1Q5TGY3 1603 aaPredicted RBP30.98■■■□□ 2.55
UBE2D3-229ENST00000510129 BRINP3Q76B58 766 aa30.97■■■□□ 2.55
UBE2D3-229ENST00000510129 KDM2AQ9Y2K7 1162 aa30.97■■■□□ 2.55
UBE2D3-229ENST00000510129 CDC42BPGQ6DT37 1551 aa30.95■■■□□ 2.54
UBE2D3-229ENST00000510129 JCADQ9P266 1359 aa30.92■■■□□ 2.54
UBE2D3-229ENST00000510129 C1orf167Q5SNV9 1468 aa30.92■■■□□ 2.54
UBE2D3-229ENST00000510129 COL16A1Q07092 1604 aaPredicted RBP30.91■■■□□ 2.54
UBE2D3-229ENST00000510129 DLC1Q96QB1 1528 aa30.9■■■□□ 2.54
UBE2D3-229ENST00000510129 WAPLQ7Z5K2 1190 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms