RNA–Protein interactions for RNA: ENST00000510051.5

PACRGL-223, Transcript of parkin coregulated like, human

TSL 1 (best)

Gene PACRGL, Length 981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-223	ENST00000510051	RIMS2	Q9UQ26	1411 aa		29.09	■■■□□ 2.25
PACRGL-223	ENST00000510051	MYO5B	Q9ULV0	1848 aa		29.08	■■■□□ 2.25
PACRGL-223	ENST00000510051	TMEM131L	A2VDJ0	1609 aa		29.08	■■■□□ 2.25
PACRGL-223	ENST00000510051	TRIM52	Q96A61	297 aa		29.07	■■■□□ 2.24
PACRGL-223	ENST00000510051	ZFYVE9	O95405	1425 aa		29.05	■■■□□ 2.24
PACRGL-223	ENST00000510051	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.05	■■■□□ 2.24
PACRGL-223	ENST00000510051	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.05	■■■□□ 2.24
PACRGL-223	ENST00000510051	KCNA6	P17658	529 aa		29.04	■■■□□ 2.24
PACRGL-223	ENST00000510051	HFM1	A2PYH4	1435 aa		29.02	■■■□□ 2.24
PACRGL-223	ENST00000510051	PLEKHG1	Q9ULL1	1385 aa		29.01	■■■□□ 2.24
PACRGL-223	ENST00000510051	HSPA1L	P34931	641 aa		29	■■■□□ 2.23
PACRGL-223	ENST00000510051	PROSER2	Q86WR7	435 aa	Predicted RBP	28.99	■■■□□ 2.23
PACRGL-223	ENST00000510051	DISP3	Q9P2K9	1392 aa		28.99	■■■□□ 2.23
PACRGL-223	ENST00000510051	ZNF326	Q5BKZ1	582 aa	Known RBP	28.96	■■■□□ 2.23
PACRGL-223	ENST00000510051	SPHKAP	Q2M3C7	1700 aa		28.96	■■■□□ 2.23
PACRGL-223	ENST00000510051	RBM33	Q96EV2	1170 aa	Known RBP	28.95	■■■□□ 2.22
PACRGL-223	ENST00000510051	TMEM94	Q12767	1356 aa		28.95	■■■□□ 2.22
PACRGL-223	ENST00000510051	ALK	Q9UM73	1620 aa		28.94	■■■□□ 2.22
PACRGL-223	ENST00000510051	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.93	■■■□□ 2.22
PACRGL-223	ENST00000510051	TBX22	Q9Y458	520 aa		28.93	■■■□□ 2.22
PACRGL-223	ENST00000510051	XIRP1	Q702N8	1843 aa	Known RBP	28.9	■■■□□ 2.22
PACRGL-223	ENST00000510051	NKTR	P30414	1462 aa	Known RBP	28.86	■■■□□ 2.21
PACRGL-223	ENST00000510051	NWD1	Q149M9	1564 aa		28.86	■■■□□ 2.21
PACRGL-223	ENST00000510051	ADAMTS13	Q76LX8	1427 aa		28.86	■■■□□ 2.21
PACRGL-223	ENST00000510051	TRPM2	O94759	1503 aa		28.84	■■■□□ 2.21
PACRGL-223	ENST00000510051	CLTCL1	P53675	1640 aa		28.83	■■■□□ 2.21
PACRGL-223	ENST00000510051	CHD2	O14647	1828 aa	Known RBP	28.83	■■■□□ 2.21
PACRGL-223	ENST00000510051	MSH6	P52701	1360 aa		28.79	■■■□□ 2.2
PACRGL-223	ENST00000510051	FOXD1	Q16676	465 aa		28.79	■■■□□ 2.2
PACRGL-223	ENST00000510051	DIP2A	Q14689	1571 aa		28.79	■■■□□ 2.2
PACRGL-223	ENST00000510051	PIK3R4	Q99570	1358 aa		28.78	■■■□□ 2.2
PACRGL-223	ENST00000510051	C14orf37	Q86TY3	774 aa		28.78	■■■□□ 2.2
PACRGL-223	ENST00000510051	AMOTL2	Q9Y2J4	779 aa		28.77	■■■□□ 2.2
PACRGL-223	ENST00000510051	KIF1B	O60333	1816 aa		28.76	■■■□□ 2.19
PACRGL-223	ENST00000510051	ILDR2	Q71H61	639 aa		28.74	■■■□□ 2.19
PACRGL-223	ENST00000510051	MPHOSPH9	Q99550	1183 aa		28.74	■■■□□ 2.19
PACRGL-223	ENST00000510051	FAM135B	Q49AJ0	1406 aa		28.72	■■■□□ 2.19
PACRGL-223	ENST00000510051	NEXMIF	Q5QGS0	1516 aa		28.71	■■■□□ 2.19
PACRGL-223	ENST00000510051	PTPRU	Q92729	1446 aa		28.7	■■■□□ 2.19
PACRGL-223	ENST00000510051	SETBP1	Q9Y6X0	1596 aa		28.7	■■■□□ 2.18
PACRGL-223	ENST00000510051	SETD5	Q9C0A6	1442 aa		28.69	■■■□□ 2.18
PACRGL-223	ENST00000510051	VGF	O15240	615 aa	Predicted RBP	28.69	■■■□□ 2.18
PACRGL-223	ENST00000510051	SLAIN2	Q9P270	581 aa		28.69	■■■□□ 2.18
PACRGL-223	ENST00000510051	NRXN3	Q9Y4C0	1643 aa		28.69	■■■□□ 2.18
PACRGL-223	ENST00000510051	NCOA3	Q9Y6Q9	1424 aa		28.69	■■■□□ 2.18
PACRGL-223	ENST00000510051	RPGRIP1L	Q68CZ1	1315 aa		28.67	■■■□□ 2.18
PACRGL-223	ENST00000510051	MET	P08581	1390 aa		28.66	■■■□□ 2.18
PACRGL-223	ENST00000510051	ACIN1	Q9UKV3	1341 aa	Known RBP	28.66	■■■□□ 2.18
PACRGL-223	ENST00000510051	C19orf44	Q9H6X5	657 aa		28.65	■■■□□ 2.18
PACRGL-223	ENST00000510051	MED1	Q15648	1581 aa	Predicted RBP	28.64	■■■□□ 2.18
PACRGL-223	ENST00000510051	ATF3	P18847	181 aa		28.64	■■■□□ 2.18
PACRGL-223	ENST00000510051	ROBO1	Q9Y6N7	1651 aa		28.64	■■■□□ 2.17
PACRGL-223	ENST00000510051	CCDC144A	A2RUR9	1427 aa		28.63	■■■□□ 2.17
PACRGL-223	ENST00000510051	RGL3	Q3MIN7	710 aa		28.62	■■■□□ 2.17
PACRGL-223	ENST00000510051	CADPS2	Q86UW7	1296 aa		28.61	■■■□□ 2.17
PACRGL-223	ENST00000510051	PHF23	Q9BUL5	403 aa	Predicted RBP	28.6	■■■□□ 2.17
PACRGL-223	ENST00000510051	RAB3GAP2	Q9H2M9	1393 aa		28.59	■■■□□ 2.17
PACRGL-223	ENST00000510051	XRN1	Q8IZH2	1706 aa	Known RBP	28.57	■■■□□ 2.16
PACRGL-223	ENST00000510051	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.56	■■■□□ 2.16
PACRGL-223	ENST00000510051	PPL	O60437	1756 aa		28.52	■■■□□ 2.16
PACRGL-223	ENST00000510051	SPATA31E1	Q6ZUB1	1445 aa		28.5	■■■□□ 2.15
PACRGL-223	ENST00000510051	ADGRF5	Q8IZF2	1346 aa		28.49	■■■□□ 2.15
PACRGL-223	ENST00000510051	SOCS7	O14512	581 aa		28.49	■■■□□ 2.15
PACRGL-223	ENST00000510051	PHLPP1	O60346	1717 aa		28.47	■■■□□ 2.15
PACRGL-223	ENST00000510051	ANKRD30B	Q9BXX2	1392 aa		28.46	■■■□□ 2.15
PACRGL-223	ENST00000510051	DCC	P43146	1447 aa		28.45	■■■□□ 2.15
PACRGL-223	ENST00000510051	SETD1A	O15047	1707 aa	Known RBP	28.44	■■■□□ 2.14
PACRGL-223	ENST00000510051	ADGRL3	Q9HAR2	1447 aa		28.43	■■■□□ 2.14
PACRGL-223	ENST00000510051	ROBO2	Q9HCK4	1378 aa		28.43	■■■□□ 2.14
PACRGL-223	ENST00000510051	BRINP3	Q76B58	766 aa		28.43	■■■□□ 2.14
PACRGL-223	ENST00000510051	JCAD	Q9P266	1359 aa		28.41	■■■□□ 2.14
PACRGL-223	ENST00000510051	PTCH1	Q13635	1447 aa		28.41	■■■□□ 2.14
PACRGL-223	ENST00000510051	MST1R	Q04912	1400 aa		28.39	■■■□□ 2.14
PACRGL-223	ENST00000510051	STK26	Q9P289	416 aa		28.39	■■■□□ 2.14
PACRGL-223	ENST00000510051	HRC	P23327	699 aa		28.38	■■■□□ 2.13
PACRGL-223	ENST00000510051	NALCN	Q8IZF0	1738 aa		28.36	■■■□□ 2.13
PACRGL-223	ENST00000510051	IFT172	Q9UG01	1749 aa		28.36	■■■□□ 2.13
PACRGL-223	ENST00000510051	TMEM132E	Q6IEE7	984 aa		28.36	■■■□□ 2.13
PACRGL-223	ENST00000510051	COL16A1	Q07092	1604 aa	Predicted RBP	28.36	■■■□□ 2.13
PACRGL-223	ENST00000510051	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.34	■■■□□ 2.13
PACRGL-223	ENST00000510051	RGS17	Q9UGC6	210 aa	Predicted RBP	28.33	■■■□□ 2.13
PACRGL-223	ENST00000510051	ASXL1	Q8IXJ9	1541 aa		28.33	■■■□□ 2.13
PACRGL-223	ENST00000510051	PIK3C2G	O75747	1445 aa		28.32	■■■□□ 2.12
PACRGL-223	ENST00000510051	PRAG1	Q86YV5	1406 aa		28.32	■■■□□ 2.12
PACRGL-223	ENST00000510051	LRPPRC	P42704	1394 aa	Known RBP	28.29	■■■□□ 2.12
PACRGL-223	ENST00000510051	WAPL	Q7Z5K2	1190 aa		28.29	■■■□□ 2.12
PACRGL-223	ENST00000510051	DDX17	Q92841	729 aa	Known RBP	28.29	■■■□□ 2.12
PACRGL-223	ENST00000510051	C14orf93	Q9H972	538 aa	Known RBP	28.28	■■■□□ 2.12
PACRGL-223	ENST00000510051	C1orf167	Q5SNV9	1468 aa		28.27	■■■□□ 2.12
PACRGL-223	ENST00000510051	SPATA31A6	Q5VVP1	1343 aa		28.27	■■■□□ 2.12
PACRGL-223	ENST00000510051	CFAP70	Q5T0N1	1121 aa		28.27	■■■□□ 2.12
PACRGL-223	ENST00000510051	ABCC11	Q96J66	1382 aa		28.25	■■■□□ 2.11
PACRGL-223	ENST00000510051	MEX3C	Q5U5Q3	659 aa	Known RBP	28.25	■■■□□ 2.11
PACRGL-223	ENST00000510051	ORAI2	Q96SN7	254 aa		28.25	■■■□□ 2.11
PACRGL-223	ENST00000510051	LRRC59	Q96AG4	307 aa	Known RBP	28.24	■■■□□ 2.11
PACRGL-223	ENST00000510051	KDM2A	Q9Y2K7	1162 aa		28.24	■■■□□ 2.11
PACRGL-223	ENST00000510051	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.24	■■■□□ 2.11
PACRGL-223	ENST00000510051	MYOM2	P54296	1465 aa		28.23	■■■□□ 2.11
PACRGL-223	ENST00000510051	TECPR2	O15040	1411 aa		28.23	■■■□□ 2.11
PACRGL-223	ENST00000510051	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.22	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms