RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 GCC2Q8IWJ2 1684 aa16.1■□□□□ 0.17
CYSTM1-203ENST00000509589 ZFYVE9O95405 1425 aa16.09■□□□□ 0.17
CYSTM1-203ENST00000509589 ADGRL2O95490 1459 aa16.09■□□□□ 0.17
CYSTM1-203ENST00000509589 BCANQ96GW7 911 aa16.08■□□□□ 0.16
CYSTM1-203ENST00000509589 MSH6P52701 1360 aa16.07■□□□□ 0.16
CYSTM1-203ENST00000509589 SLC52A1Q9NWF4 448 aa16.06■□□□□ 0.16
CYSTM1-203ENST00000509589 PHLPP1O60346 1717 aa16.05■□□□□ 0.16
CYSTM1-203ENST00000509589 RPRD2Q5VT52 1461 aaKnown RBP16.05■□□□□ 0.16
CYSTM1-203ENST00000509589 PLEKHG1Q9ULL1 1385 aa16.05■□□□□ 0.16
CYSTM1-203ENST00000509589 SLAIN2Q9P270 581 aa16.05■□□□□ 0.16
CYSTM1-203ENST00000509589 ANKRD50Q9ULJ7 1429 aa16.04■□□□□ 0.16
CYSTM1-203ENST00000509589 RIMS2Q9UQ26 1411 aa16.04■□□□□ 0.16
CYSTM1-203ENST00000509589 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
CYSTM1-203ENST00000509589 SETD1AO15047 1707 aaKnown RBP16.04■□□□□ 0.16
CYSTM1-203ENST00000509589 TMEM131LA2VDJ0 1609 aa16.04■□□□□ 0.16
CYSTM1-203ENST00000509589 CHD2O14647 1828 aaKnown RBP16.03■□□□□ 0.16
CYSTM1-203ENST00000509589 PPP1R15AO75807 674 aaPredicted RBP16.02■□□□□ 0.16
CYSTM1-203ENST00000509589 COL16A1Q07092 1604 aaPredicted RBP16.01■□□□□ 0.15
CYSTM1-203ENST00000509589 JCADQ9P266 1359 aa16■□□□□ 0.15
CYSTM1-203ENST00000509589 NUTM2DQ5VT03 806 aaPredicted RBP16■□□□□ 0.15
CYSTM1-203ENST00000509589 LRP6O75581 1613 aa16■□□□□ 0.15
CYSTM1-203ENST00000509589 ADAMTS13Q76LX8 1427 aa15.99■□□□□ 0.15
CYSTM1-203ENST00000509589 UNC13BO14795 1591 aa15.99■□□□□ 0.15
CYSTM1-203ENST00000509589 CHGAP10645 457 aaKnown RBP15.98■□□□□ 0.15
CYSTM1-203ENST00000509589 TBX22Q9Y458 520 aa15.98■□□□□ 0.15
CYSTM1-203ENST00000509589 E9PCH4 1651 aa15.98■□□□□ 0.15
CYSTM1-203ENST00000509589 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.95■□□□□ 0.14
CYSTM1-203ENST00000509589 C14orf37Q86TY3 774 aa15.95■□□□□ 0.14
CYSTM1-203ENST00000509589 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
CYSTM1-203ENST00000509589 HDGFP51858 240 aaKnown RBP15.94■□□□□ 0.14
CYSTM1-203ENST00000509589 AHDC1Q5TGY3 1603 aaPredicted RBP15.94■□□□□ 0.14
CYSTM1-203ENST00000509589 DIP2AQ14689 1571 aa15.93■□□□□ 0.14
CYSTM1-203ENST00000509589 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.93■□□□□ 0.14
CYSTM1-203ENST00000509589 PTPRUQ92729 1446 aa15.93■□□□□ 0.14
CYSTM1-203ENST00000509589 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
CYSTM1-203ENST00000509589 SPATA31A6Q5VVP1 1343 aa15.92■□□□□ 0.14
CYSTM1-203ENST00000509589 C19orf44Q9H6X5 657 aa15.91■□□□□ 0.14
CYSTM1-203ENST00000509589 PIK3R4Q99570 1358 aa15.9■□□□□ 0.14
CYSTM1-203ENST00000509589 SHPRHQ149N8 1683 aa15.9■□□□□ 0.14
CYSTM1-203ENST00000509589 ATF3P18847 181 aa15.9■□□□□ 0.14
CYSTM1-203ENST00000509589 ITGAEP38570 1179 aa15.9■□□□□ 0.14
CYSTM1-203ENST00000509589 MEX3CQ5U5Q3 659 aaKnown RBP15.9■□□□□ 0.14
CYSTM1-203ENST00000509589 CADPS2Q86UW7 1296 aa15.9■□□□□ 0.14
CYSTM1-203ENST00000509589 TRPM2O94759 1503 aa15.89■□□□□ 0.13
CYSTM1-203ENST00000509589 BRINP3Q76B58 766 aa15.89■□□□□ 0.13
CYSTM1-203ENST00000509589 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
CYSTM1-203ENST00000509589 AMOTL2Q9Y2J4 779 aa15.89■□□□□ 0.13
CYSTM1-203ENST00000509589 ROCK1Q13464 1354 aa15.88■□□□□ 0.13
CYSTM1-203ENST00000509589 NRXN3Q9Y4C0 1643 aa15.88■□□□□ 0.13
CYSTM1-203ENST00000509589 TRIM52Q96A61 297 aa15.88■□□□□ 0.13
CYSTM1-203ENST00000509589 NUP155O75694 1391 aa15.87■□□□□ 0.13
CYSTM1-203ENST00000509589 ZNF772Q68DY9 489 aaPredicted RBP15.86■□□□□ 0.13
CYSTM1-203ENST00000509589 XRN1Q8IZH2 1706 aaKnown RBP15.85■□□□□ 0.13
CYSTM1-203ENST00000509589 ASXL1Q8IXJ9 1541 aa15.85■□□□□ 0.13
CYSTM1-203ENST00000509589 NUTM2BA6NNL0 878 aaPredicted RBP15.85■□□□□ 0.13
CYSTM1-203ENST00000509589 NUTM2EB1AL46 878 aaPredicted RBP15.85■□□□□ 0.13
CYSTM1-203ENST00000509589 NUTM2AQ8IVF1 878 aaPredicted RBP15.85■□□□□ 0.13
CYSTM1-203ENST00000509589 UPF1Q92900 1129 aaKnown RBP eCLIP15.85■□□□□ 0.136e-7■■■■■ 56.9
CYSTM1-203ENST00000509589 SPHKAPQ2M3C7 1700 aa15.85■□□□□ 0.13
CYSTM1-203ENST00000509589 SETBP1Q9Y6X0 1596 aa15.83■□□□□ 0.13
CYSTM1-203ENST00000509589 METP08581 1390 aa15.83■□□□□ 0.12
CYSTM1-203ENST00000509589 DCCP43146 1447 aa15.83■□□□□ 0.12
CYSTM1-203ENST00000509589 MST1RQ04912 1400 aa15.83■□□□□ 0.12
CYSTM1-203ENST00000509589 DDX17Q92841 729 aaKnown RBP15.82■□□□□ 0.12
CYSTM1-203ENST00000509589 NHSL1Q5SYE7 1610 aa15.8■□□□□ 0.12
CYSTM1-203ENST00000509589 SETD5Q9C0A6 1442 aa15.8■□□□□ 0.12
CYSTM1-203ENST00000509589 AFF2P51816 1311 aa15.8■□□□□ 0.12
CYSTM1-203ENST00000509589 RXRBP28702 533 aa15.8■□□□□ 0.12
CYSTM1-203ENST00000509589 NALCNQ8IZF0 1738 aa15.78■□□□□ 0.12
CYSTM1-203ENST00000509589 ZNF326Q5BKZ1 582 aaKnown RBP15.78■□□□□ 0.12
CYSTM1-203ENST00000509589 CLTCL1P53675 1640 aa15.77■□□□□ 0.12
CYSTM1-203ENST00000509589 NEXMIFQ5QGS0 1516 aa15.77■□□□□ 0.11
CYSTM1-203ENST00000509589 KIF1BO60333 1816 aa15.77■□□□□ 0.11
CYSTM1-203ENST00000509589 CDK12Q9NYV4 1490 aaPredicted RBP15.77■□□□□ 0.11
CYSTM1-203ENST00000509589 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.11
CYSTM1-203ENST00000509589 PNPLA6Q8IY17 1366 aa15.75■□□□□ 0.11
CYSTM1-203ENST00000509589 C8orf37Q96NL8 207 aa15.75■□□□□ 0.11
CYSTM1-203ENST00000509589 RGS12O14924 1447 aa15.75■□□□□ 0.11
CYSTM1-203ENST00000509589 LRRC59Q96AG4 307 aaKnown RBP15.74■□□□□ 0.11
CYSTM1-203ENST00000509589 SRCAPQ6ZRS2 3230 aa15.73■□□□□ 0.11
CYSTM1-203ENST00000509589 C1orf167Q5SNV9 1468 aa15.71■□□□□ 0.11
CYSTM1-203ENST00000509589 QTRT2Q9H974 415 aaKnown RBP15.71■□□□□ 0.11
CYSTM1-203ENST00000509589 ADAMTS2O95450 1211 aa15.7■□□□□ 0.1
CYSTM1-203ENST00000509589 ROBO2Q9HCK4 1378 aa15.7■□□□□ 0.1
CYSTM1-203ENST00000509589 RBM6P78332 1123 aaKnown RBP15.69■□□□□ 0.1
CYSTM1-203ENST00000509589 ORAI2Q96SN7 254 aa15.69■□□□□ 0.1
CYSTM1-203ENST00000509589 LAMC1P11047 1609 aa15.68■□□□□ 0.1
CYSTM1-203ENST00000509589 PTCH1Q13635 1447 aa15.68■□□□□ 0.1
CYSTM1-203ENST00000509589 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
CYSTM1-203ENST00000509589 NAIPQ13075 1403 aa15.66■□□□□ 0.1
CYSTM1-203ENST00000509589 SOS2Q07890 1332 aaPredicted RBP15.66■□□□□ 0.1
CYSTM1-203ENST00000509589 PPLO60437 1756 aa15.62■□□□□ 0.09
CYSTM1-203ENST00000509589 PRAG1Q86YV5 1406 aa15.62■□□□□ 0.09
CYSTM1-203ENST00000509589 USP21Q9UK80 565 aa15.62■□□□□ 0.09
CYSTM1-203ENST00000509589 EP400Q96L91 3159 aa15.61■□□□□ 0.09
CYSTM1-203ENST00000509589 VGFO15240 615 aaPredicted RBP15.61■□□□□ 0.09
CYSTM1-203ENST00000509589 RRBP1Q9P2E9 1410 aaKnown RBP15.6■□□□□ 0.09
CYSTM1-203ENST00000509589 COL22A1Q8NFW1 1626 aaPredicted RBP15.6■□□□□ 0.09
CYSTM1-203ENST00000509589 FNBP4Q8N3X1 1017 aaPredicted RBP15.59■□□□□ 0.09
CYSTM1-203ENST00000509589 ATAD2Q6PL18 1390 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms