RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 EID1Q9Y6B2 187 aa20.94■□□□□ 0.94
DDX41-210ENST00000509576 RPRD2Q5VT52 1461 aaKnown RBP20.92■□□□□ 0.94
DDX41-210ENST00000509576 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
DDX41-210ENST00000509576 FAM135BQ49AJ0 1406 aa20.9■□□□□ 0.94
DDX41-210ENST00000509576 KCNA6P17658 529 aa20.9■□□□□ 0.94
DDX41-210ENST00000509576 STAG3Q9UJ98 1225 aa20.9■□□□□ 0.94
DDX41-210ENST00000509576 NKTRP30414 1462 aaKnown RBP20.89■□□□□ 0.94
DDX41-210ENST00000509576 IQGAP3Q86VI3 1631 aa20.89■□□□□ 0.93
DDX41-210ENST00000509576 RIMS2Q9UQ26 1411 aa20.86■□□□□ 0.93
DDX41-210ENST00000509576 SLC52A1Q9NWF4 448 aa20.85■□□□□ 0.93
DDX41-210ENST00000509576 PLEKHG1Q9ULL1 1385 aa20.84■□□□□ 0.93
DDX41-210ENST00000509576 PROSER2Q86WR7 435 aaPredicted RBP20.83■□□□□ 0.93
DDX41-210ENST00000509576 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
DDX41-210ENST00000509576 ADAMTS13Q76LX8 1427 aa20.83■□□□□ 0.93
DDX41-210ENST00000509576 PHLPP1O60346 1717 aa20.81■□□□□ 0.92
DDX41-210ENST00000509576 COL16A1Q07092 1604 aaPredicted RBP20.8■□□□□ 0.92
DDX41-210ENST00000509576 NRXN3Q9Y4C0 1643 aa20.8■□□□□ 0.92
DDX41-210ENST00000509576 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.79■□□□□ 0.92
DDX41-210ENST00000509576 ROCK1Q13464 1354 aa20.78■□□□□ 0.92
DDX41-210ENST00000509576 NUTM2DQ5VT03 806 aaPredicted RBP20.77■□□□□ 0.92
DDX41-210ENST00000509576 POTEAQ6S8J7 498 aa20.76■□□□□ 0.91
DDX41-210ENST00000509576 PTPRUQ92729 1446 aa20.76■□□□□ 0.91
DDX41-210ENST00000509576 SETD1AO15047 1707 aaKnown RBP20.75■□□□□ 0.91
DDX41-210ENST00000509576 SPHKAPQ2M3C7 1700 aa20.75■□□□□ 0.91
DDX41-210ENST00000509576 DIP2AQ14689 1571 aa20.73■□□□□ 0.91
DDX41-210ENST00000509576 XRN1Q8IZH2 1706 aaKnown RBP20.73■□□□□ 0.91
DDX41-210ENST00000509576 MSH6P52701 1360 aa20.72■□□□□ 0.91
DDX41-210ENST00000509576 TBX22Q9Y458 520 aa20.72■□□□□ 0.91
DDX41-210ENST00000509576 PPARGC1BQ86YN6 1023 aaKnown RBP20.71■□□□□ 0.91
DDX41-210ENST00000509576 BCANQ96GW7 911 aa20.71■□□□□ 0.91
DDX41-210ENST00000509576 SLAIN2Q9P270 581 aa20.71■□□□□ 0.91
DDX41-210ENST00000509576 LRP6O75581 1613 aa20.71■□□□□ 0.91
DDX41-210ENST00000509576 CHGAP10645 457 aaKnown RBP20.69■□□□□ 0.9
DDX41-210ENST00000509576 NUP155O75694 1391 aa20.69■□□□□ 0.9
DDX41-210ENST00000509576 PPP1R15AO75807 674 aaPredicted RBP20.68■□□□□ 0.9
DDX41-210ENST00000509576 CLTCL1P53675 1640 aa20.67■□□□□ 0.9
DDX41-210ENST00000509576 AHDC1Q5TGY3 1603 aaPredicted RBP20.67■□□□□ 0.9
DDX41-210ENST00000509576 TRPM2O94759 1503 aa20.67■□□□□ 0.9
DDX41-210ENST00000509576 SETBP1Q9Y6X0 1596 aa20.67■□□□□ 0.9
DDX41-210ENST00000509576 ITGAEP38570 1179 aa20.66■□□□□ 0.9
DDX41-210ENST00000509576 SHPRHQ149N8 1683 aa20.65■□□□□ 0.9
DDX41-210ENST00000509576 NCOA3Q9Y6Q9 1424 aa20.65■□□□□ 0.9
DDX41-210ENST00000509576 PIK3R4Q99570 1358 aa20.63■□□□□ 0.89
DDX41-210ENST00000509576 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
DDX41-210ENST00000509576 JCADQ9P266 1359 aa20.62■□□□□ 0.89
DDX41-210ENST00000509576 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
DDX41-210ENST00000509576 NALCNQ8IZF0 1738 aa20.61■□□□□ 0.89
DDX41-210ENST00000509576 NHSL1Q5SYE7 1610 aa20.6■□□□□ 0.89
DDX41-210ENST00000509576 METP08581 1390 aa20.59■□□□□ 0.89
DDX41-210ENST00000509576 AMOTL2Q9Y2J4 779 aa20.59■□□□□ 0.89
DDX41-210ENST00000509576 HDGFP51858 240 aaKnown RBP20.58■□□□□ 0.89
DDX41-210ENST00000509576 KIF1BO60333 1816 aa20.57■□□□□ 0.88
DDX41-210ENST00000509576 C19orf44Q9H6X5 657 aa20.57■□□□□ 0.88
DDX41-210ENST00000509576 MST1RQ04912 1400 aa20.56■□□□□ 0.88
DDX41-210ENST00000509576 NAIPQ13075 1403 aa20.56■□□□□ 0.88
DDX41-210ENST00000509576 RRBP1Q9P2E9 1410 aaKnown RBP20.56■□□□□ 0.88
DDX41-210ENST00000509576 ASXL1Q8IXJ9 1541 aa20.56■□□□□ 0.88
DDX41-210ENST00000509576 BRINP3Q76B58 766 aa20.55■□□□□ 0.88
DDX41-210ENST00000509576 C14orf37Q86TY3 774 aa20.53■□□□□ 0.88
DDX41-210ENST00000509576 CADPS2Q86UW7 1296 aa20.53■□□□□ 0.88
DDX41-210ENST00000509576 DCCP43146 1447 aa20.53■□□□□ 0.88
DDX41-210ENST00000509576 ATF3P18847 181 aa20.5■□□□□ 0.87
DDX41-210ENST00000509576 PPLO60437 1756 aa20.49■□□□□ 0.87
DDX41-210ENST00000509576 SPATA31A6Q5VVP1 1343 aa20.49■□□□□ 0.87
DDX41-210ENST00000509576 ADGRL3Q9HAR2 1447 aa20.48■□□□□ 0.87
DDX41-210ENST00000509576 DDX17Q92841 729 aaKnown RBP20.48■□□□□ 0.87
DDX41-210ENST00000509576 LAMC1P11047 1609 aa20.47■□□□□ 0.87
DDX41-210ENST00000509576 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
DDX41-210ENST00000509576 ZNF326Q5BKZ1 582 aaKnown RBP20.45■□□□□ 0.86
DDX41-210ENST00000509576 ROBO2Q9HCK4 1378 aa20.42■□□□□ 0.86
DDX41-210ENST00000509576 HFM1A2PYH4 1435 aa20.41■□□□□ 0.86
DDX41-210ENST00000509576 PRAG1Q86YV5 1406 aa20.4■□□□□ 0.86
DDX41-210ENST00000509576 PNPLA6Q8IY17 1366 aa20.4■□□□□ 0.86
DDX41-210ENST00000509576 IFT172Q9UG01 1749 aa20.4■□□□□ 0.86
DDX41-210ENST00000509576 C1orf167Q5SNV9 1468 aa20.39■□□□□ 0.85
DDX41-210ENST00000509576 PTCH1Q13635 1447 aa20.39■□□□□ 0.85
DDX41-210ENST00000509576 NUTM2BA6NNL0 878 aaPredicted RBP20.39■□□□□ 0.85
DDX41-210ENST00000509576 NUTM2EB1AL46 878 aaPredicted RBP20.39■□□□□ 0.85
DDX41-210ENST00000509576 NUTM2AQ8IVF1 878 aaPredicted RBP20.39■□□□□ 0.85
DDX41-210ENST00000509576 TRIM52Q96A61 297 aa20.38■□□□□ 0.85
DDX41-210ENST00000509576 MEX3CQ5U5Q3 659 aaKnown RBP20.37■□□□□ 0.85
DDX41-210ENST00000509576 UPF1Q92900 1129 aaKnown RBP eCLIP20.36■□□□□ 0.85
DDX41-210ENST00000509576 AFF2P51816 1311 aa20.35■□□□□ 0.85
DDX41-210ENST00000509576 ZNF772Q68DY9 489 aaPredicted RBP20.35■□□□□ 0.85
DDX41-210ENST00000509576 FOXD1Q16676 465 aa20.34■□□□□ 0.85
DDX41-210ENST00000509576 CDK12Q9NYV4 1490 aaPredicted RBP20.33■□□□□ 0.85
DDX41-210ENST00000509576 ORAI2Q96SN7 254 aa20.33■□□□□ 0.85
DDX41-210ENST00000509576 RGS12O14924 1447 aa20.32■□□□□ 0.84
DDX41-210ENST00000509576 COL22A1Q8NFW1 1626 aaPredicted RBP20.31■□□□□ 0.84
DDX41-210ENST00000509576 SOS2Q07890 1332 aaPredicted RBP20.29■□□□□ 0.84
DDX41-210ENST00000509576 SPATA31E1Q6ZUB1 1445 aa20.29■□□□□ 0.84
DDX41-210ENST00000509576 LRRC59Q96AG4 307 aaKnown RBP20.29■□□□□ 0.84
DDX41-210ENST00000509576 CDC42BPGQ6DT37 1551 aa20.29■□□□□ 0.84
DDX41-210ENST00000509576 RXRBP28702 533 aa20.28■□□□□ 0.84
DDX41-210ENST00000509576 SLC4A1APQ9BWU0 796 aaKnown RBP20.28■□□□□ 0.84
DDX41-210ENST00000509576 ADGRF5Q8IZF2 1346 aa20.27■□□□□ 0.84
DDX41-210ENST00000509576 KNDC1Q76NI1 1749 aa20.27■□□□□ 0.84
DDX41-210ENST00000509576 MARF1Q9Y4F3 1742 aaKnown RBP20.27■□□□□ 0.84
DDX41-210ENST00000509576 VGFO15240 615 aaPredicted RBP20.27■□□□□ 0.84
DDX41-210ENST00000509576 C8orf37Q96NL8 207 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms