RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 TMEM94Q12767 1356 aa22.29■■□□□ 1.16
HMGCL-208ENST00000509389 TMEM131LA2VDJ0 1609 aa22.28■■□□□ 1.16
HMGCL-208ENST00000509389 ZFYVE9O95405 1425 aa22.28■■□□□ 1.16
HMGCL-208ENST00000509389 ITGAEP38570 1179 aa22.28■■□□□ 1.16
HMGCL-208ENST00000509389 IQGAP3Q86VI3 1631 aa22.28■■□□□ 1.16
HMGCL-208ENST00000509389 BCANQ96GW7 911 aa22.27■■□□□ 1.16
HMGCL-208ENST00000509389 RIMS2Q9UQ26 1411 aa22.26■■□□□ 1.15
HMGCL-208ENST00000509389 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
HMGCL-208ENST00000509389 NWD1Q149M9 1564 aa22.25■■□□□ 1.15
HMGCL-208ENST00000509389 PLEKHG1Q9ULL1 1385 aa22.24■■□□□ 1.15
HMGCL-208ENST00000509389 HDGFP51858 240 aaKnown RBP22.24■■□□□ 1.15
HMGCL-208ENST00000509389 RBM33Q96EV2 1170 aaKnown RBP22.24■■□□□ 1.15
HMGCL-208ENST00000509389 NUP155O75694 1391 aa22.23■■□□□ 1.15
HMGCL-208ENST00000509389 PPP1R15AO75807 674 aaPredicted RBP22.23■■□□□ 1.15
HMGCL-208ENST00000509389 CHGAP10645 457 aaKnown RBP22.23■■□□□ 1.15
HMGCL-208ENST00000509389 NKTRP30414 1462 aaKnown RBP22.23■■□□□ 1.15
HMGCL-208ENST00000509389 FAM135BQ49AJ0 1406 aa22.21■■□□□ 1.15
HMGCL-208ENST00000509389 CHD2O14647 1828 aaKnown RBP22.21■■□□□ 1.15
HMGCL-208ENST00000509389 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.19■■□□□ 1.14
HMGCL-208ENST00000509389 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
HMGCL-208ENST00000509389 TBX22Q9Y458 520 aa22.17■■□□□ 1.14
HMGCL-208ENST00000509389 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
HMGCL-208ENST00000509389 ROBO1Q9Y6N7 1651 aa22.15■■□□□ 1.14
HMGCL-208ENST00000509389 MSH6P52701 1360 aa22.14■■□□□ 1.13
HMGCL-208ENST00000509389 ADAMTS13Q76LX8 1427 aa22.14■■□□□ 1.13
HMGCL-208ENST00000509389 SPHKAPQ2M3C7 1700 aa22.11■■□□□ 1.13
HMGCL-208ENST00000509389 DIP2AQ14689 1571 aa22.11■■□□□ 1.13
HMGCL-208ENST00000509389 RRBP1Q9P2E9 1410 aaKnown RBP22.1■■□□□ 1.13
HMGCL-208ENST00000509389 SLAIN2Q9P270 581 aa22.09■■□□□ 1.13
HMGCL-208ENST00000509389 PIK3R4Q99570 1358 aa22.07■■□□□ 1.12
HMGCL-208ENST00000509389 NCOA3Q9Y6Q9 1424 aa22.07■■□□□ 1.12
HMGCL-208ENST00000509389 TRPM2O94759 1503 aa22.05■■□□□ 1.12
HMGCL-208ENST00000509389 NAIPQ13075 1403 aa22.04■■□□□ 1.12
HMGCL-208ENST00000509389 RGS17Q9UGC6 210 aaPredicted RBP22.04■■□□□ 1.12
HMGCL-208ENST00000509389 PHLPP1O60346 1717 aa22.03■■□□□ 1.12
HMGCL-208ENST00000509389 PTPRUQ92729 1446 aa22.03■■□□□ 1.12
HMGCL-208ENST00000509389 C14orf37Q86TY3 774 aa22.02■■□□□ 1.12
HMGCL-208ENST00000509389 AMOTL2Q9Y2J4 779 aa22.02■■□□□ 1.12
HMGCL-208ENST00000509389 NRXN3Q9Y4C0 1643 aa22.02■■□□□ 1.11
HMGCL-208ENST00000509389 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.01■■□□□ 1.11
HMGCL-208ENST00000509389 ZNF326Q5BKZ1 582 aaKnown RBP22.01■■□□□ 1.11
HMGCL-208ENST00000509389 CLTCL1P53675 1640 aa22.01■■□□□ 1.11
HMGCL-208ENST00000509389 C19orf44Q9H6X5 657 aa21.99■■□□□ 1.11
HMGCL-208ENST00000509389 SETBP1Q9Y6X0 1596 aa21.99■■□□□ 1.11
HMGCL-208ENST00000509389 CADPS2Q86UW7 1296 aa21.97■■□□□ 1.11
HMGCL-208ENST00000509389 XRN1Q8IZH2 1706 aaKnown RBP21.96■■□□□ 1.11
HMGCL-208ENST00000509389 ATF3P18847 181 aa21.96■■□□□ 1.11
HMGCL-208ENST00000509389 TRIM26Q12899 539 aaPredicted RBP21.96■■□□□ 1.11
HMGCL-208ENST00000509389 NEXMIFQ5QGS0 1516 aa21.96■■□□□ 1.11
HMGCL-208ENST00000509389 KIF1BO60333 1816 aa21.95■■□□□ 1.11
HMGCL-208ENST00000509389 COL16A1Q07092 1604 aaPredicted RBP21.95■■□□□ 1.1
HMGCL-208ENST00000509389 HFM1A2PYH4 1435 aa21.94■■□□□ 1.1
HMGCL-208ENST00000509389 JCADQ9P266 1359 aa21.94■■□□□ 1.1
HMGCL-208ENST00000509389 METP08581 1390 aa21.93■■□□□ 1.1
HMGCL-208ENST00000509389 TRIM52Q96A61 297 aa21.93■■□□□ 1.1
HMGCL-208ENST00000509389 POTEAQ6S8J7 498 aa21.91■■□□□ 1.1
HMGCL-208ENST00000509389 AHDC1Q5TGY3 1603 aaPredicted RBP21.91■■□□□ 1.1
HMGCL-208ENST00000509389 DCCP43146 1447 aa21.89■■□□□ 1.09
HMGCL-208ENST00000509389 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
HMGCL-208ENST00000509389 BRINP3Q76B58 766 aa21.87■■□□□ 1.09
HMGCL-208ENST00000509389 VGFO15240 615 aaPredicted RBP21.84■■□□□ 1.09
HMGCL-208ENST00000509389 MST1RQ04912 1400 aa21.84■■□□□ 1.09
HMGCL-208ENST00000509389 SPATA31A6Q5VVP1 1343 aa21.83■■□□□ 1.09
HMGCL-208ENST00000509389 LRP6O75581 1613 aa21.83■■□□□ 1.09
HMGCL-208ENST00000509389 SHPRHQ149N8 1683 aa21.83■■□□□ 1.09
HMGCL-208ENST00000509389 SETD1AO15047 1707 aaKnown RBP21.82■■□□□ 1.08
HMGCL-208ENST00000509389 ADGRL3Q9HAR2 1447 aa21.82■■□□□ 1.08
HMGCL-208ENST00000509389 ASXL1Q8IXJ9 1541 aa21.82■■□□□ 1.08
HMGCL-208ENST00000509389 NALCNQ8IZF0 1738 aa21.82■■□□□ 1.08
HMGCL-208ENST00000509389 RPGRIP1LQ68CZ1 1315 aa21.81■■□□□ 1.08
HMGCL-208ENST00000509389 PPLO60437 1756 aa21.79■■□□□ 1.08
HMGCL-208ENST00000509389 FOXD1Q16676 465 aa21.79■■□□□ 1.08
HMGCL-208ENST00000509389 NHSL1Q5SYE7 1610 aa21.78■■□□□ 1.08
HMGCL-208ENST00000509389 MEX3CQ5U5Q3 659 aaKnown RBP21.77■■□□□ 1.08
HMGCL-208ENST00000509389 PTCH1Q13635 1447 aa21.76■■□□□ 1.07
HMGCL-208ENST00000509389 ROBO2Q9HCK4 1378 aa21.75■■□□□ 1.07
HMGCL-208ENST00000509389 SETD5Q9C0A6 1442 aa21.75■■□□□ 1.07
HMGCL-208ENST00000509389 PCGF6Q9BYE7 350 aa21.74■■□□□ 1.07
HMGCL-208ENST00000509389 PRAG1Q86YV5 1406 aa21.73■■□□□ 1.07
HMGCL-208ENST00000509389 NUTM2BA6NNL0 878 aaPredicted RBP21.73■■□□□ 1.07
HMGCL-208ENST00000509389 NUTM2EB1AL46 878 aaPredicted RBP21.73■■□□□ 1.07
HMGCL-208ENST00000509389 NUTM2AQ8IVF1 878 aaPredicted RBP21.73■■□□□ 1.07
HMGCL-208ENST00000509389 DDX17Q92841 729 aaKnown RBP21.73■■□□□ 1.07
HMGCL-208ENST00000509389 ZNF772Q68DY9 489 aaPredicted RBP21.72■■□□□ 1.07
HMGCL-208ENST00000509389 MPHOSPH9Q99550 1183 aa21.72■■□□□ 1.07
HMGCL-208ENST00000509389 C1orf167Q5SNV9 1468 aa21.71■■□□□ 1.07
HMGCL-208ENST00000509389 CCDC144AA2RUR9 1427 aa21.71■■□□□ 1.07
HMGCL-208ENST00000509389 LRRC59Q96AG4 307 aaKnown RBP21.71■■□□□ 1.07
HMGCL-208ENST00000509389 ADGRF5Q8IZF2 1346 aa21.68■■□□□ 1.06
HMGCL-208ENST00000509389 RGL3Q3MIN7 710 aa21.68■■□□□ 1.06
HMGCL-208ENST00000509389 SPATA31E1Q6ZUB1 1445 aa21.68■■□□□ 1.06
HMGCL-208ENST00000509389 IFT172Q9UG01 1749 aa21.66■■□□□ 1.06
HMGCL-208ENST00000509389 ORAI2Q96SN7 254 aa21.66■■□□□ 1.06
HMGCL-208ENST00000509389 LAMC1P11047 1609 aa21.66■■□□□ 1.06
HMGCL-208ENST00000509389 PNPLA6Q8IY17 1366 aa21.66■■□□□ 1.06
HMGCL-208ENST00000509389 ANKRD30BQ9BXX2 1392 aa21.63■■□□□ 1.05
HMGCL-208ENST00000509389 AFF2P51816 1311 aa21.63■■□□□ 1.05
HMGCL-208ENST00000509389 SOS2Q07890 1332 aaPredicted RBP21.61■■□□□ 1.05
HMGCL-208ENST00000509389 RXRBP28702 533 aa21.61■■□□□ 1.05
HMGCL-208ENST00000509389 CDC42BPGQ6DT37 1551 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms