RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.44
PDLIM5-212ENST00000509333 FOXD1Q16676 465 aa24.07■■□□□ 1.44
PDLIM5-212ENST00000509333 BCANQ96GW7 911 aa24.07■■□□□ 1.44
PDLIM5-212ENST00000509333 KCNA6P17658 529 aa24.05■■□□□ 1.44
PDLIM5-212ENST00000509333 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
PDLIM5-212ENST00000509333 UBAP1LF5GYI3 381 aa24.04■■□□□ 1.44
PDLIM5-212ENST00000509333 PPP1R15AO75807 674 aaPredicted RBP24.04■■□□□ 1.44
PDLIM5-212ENST00000509333 TBX22Q9Y458 520 aa24.04■■□□□ 1.44
PDLIM5-212ENST00000509333 CPS1P31327 1500 aa24.04■■□□□ 1.44
PDLIM5-212ENST00000509333 PLEKHG1Q9ULL1 1385 aa24.03■■□□□ 1.44
PDLIM5-212ENST00000509333 MYO5BQ9ULV0 1848 aa24.02■■□□□ 1.44
PDLIM5-212ENST00000509333 ZNF326Q5BKZ1 582 aaKnown RBP24.01■■□□□ 1.43
PDLIM5-212ENST00000509333 HRCP23327 699 aa24■■□□□ 1.43
PDLIM5-212ENST00000509333 RAB3GAP2Q9H2M9 1393 aa23.98■■□□□ 1.43
PDLIM5-212ENST00000509333 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
PDLIM5-212ENST00000509333 STRCP1A6NGW2 1772 aa23.97■■□□□ 1.43
PDLIM5-212ENST00000509333 TOM1O60784 492 aa23.97■■□□□ 1.43
PDLIM5-212ENST00000509333 LRRC7Q96NW7 1537 aa23.97■■□□□ 1.43
PDLIM5-212ENST00000509333 TRPM2O94759 1503 aa23.95■■□□□ 1.43
PDLIM5-212ENST00000509333 PROSER2Q86WR7 435 aaPredicted RBP23.94■■□□□ 1.42
PDLIM5-212ENST00000509333 ADAMTS13Q76LX8 1427 aa23.93■■□□□ 1.42
PDLIM5-212ENST00000509333 CLTCL1P53675 1640 aa23.92■■□□□ 1.42
PDLIM5-212ENST00000509333 RPGRIP1LQ68CZ1 1315 aa23.91■■□□□ 1.42
PDLIM5-212ENST00000509333 RBM33Q96EV2 1170 aaKnown RBP23.9■■□□□ 1.42
PDLIM5-212ENST00000509333 VGFO15240 615 aaPredicted RBP23.89■■□□□ 1.41
PDLIM5-212ENST00000509333 PIP4K2BP78356 416 aa23.87■■□□□ 1.41
PDLIM5-212ENST00000509333 TMEM94Q12767 1356 aa23.87■■□□□ 1.41
PDLIM5-212ENST00000509333 RGL3Q3MIN7 710 aa23.86■■□□□ 1.41
PDLIM5-212ENST00000509333 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
PDLIM5-212ENST00000509333 PIK3R4Q99570 1358 aa23.85■■□□□ 1.41
PDLIM5-212ENST00000509333 CCDC144AA2RUR9 1427 aa23.83■■□□□ 1.4
PDLIM5-212ENST00000509333 KIF1BO60333 1816 aa23.82■■□□□ 1.4
PDLIM5-212ENST00000509333 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
PDLIM5-212ENST00000509333 NEXMIFQ5QGS0 1516 aa23.8■■□□□ 1.4
PDLIM5-212ENST00000509333 CHD2O14647 1828 aaKnown RBP23.8■■□□□ 1.4
PDLIM5-212ENST00000509333 SPATA31E1Q6ZUB1 1445 aa23.8■■□□□ 1.4
PDLIM5-212ENST00000509333 METP08581 1390 aa23.79■■□□□ 1.4
PDLIM5-212ENST00000509333 PTPRUQ92729 1446 aa23.79■■□□□ 1.4
PDLIM5-212ENST00000509333 ALKQ9UM73 1620 aa23.79■■□□□ 1.4
PDLIM5-212ENST00000509333 HSPA1LP34931 641 aa23.78■■□□□ 1.4
PDLIM5-212ENST00000509333 ANKRD30BQ9BXX2 1392 aa23.78■■□□□ 1.4
PDLIM5-212ENST00000509333 NKTRP30414 1462 aaKnown RBP23.76■■□□□ 1.39
PDLIM5-212ENST00000509333 XIRP1Q702N8 1843 aaKnown RBP23.76■■□□□ 1.39
PDLIM5-212ENST00000509333 NWD1Q149M9 1564 aa23.76■■□□□ 1.39
PDLIM5-212ENST00000509333 SETBP1Q9Y6X0 1596 aa23.76■■□□□ 1.39
PDLIM5-212ENST00000509333 ADGRF5Q8IZF2 1346 aa23.76■■□□□ 1.39
PDLIM5-212ENST00000509333 NCOA3Q9Y6Q9 1424 aa23.74■■□□□ 1.39
PDLIM5-212ENST00000509333 DIP2AQ14689 1571 aa23.74■■□□□ 1.39
PDLIM5-212ENST00000509333 NRXN3Q9Y4C0 1643 aa23.73■■□□□ 1.39
PDLIM5-212ENST00000509333 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
PDLIM5-212ENST00000509333 SLAIN2Q9P270 581 aa23.72■■□□□ 1.39
PDLIM5-212ENST00000509333 MSH6P52701 1360 aa23.69■■□□□ 1.38
PDLIM5-212ENST00000509333 C14orf37Q86TY3 774 aa23.68■■□□□ 1.38
PDLIM5-212ENST00000509333 FAM135BQ49AJ0 1406 aa23.67■■□□□ 1.38
PDLIM5-212ENST00000509333 PPLO60437 1756 aa23.65■■□□□ 1.38
PDLIM5-212ENST00000509333 C14orf93Q9H972 538 aaKnown RBP23.64■■□□□ 1.37
PDLIM5-212ENST00000509333 ATF3P18847 181 aa23.63■■□□□ 1.37
PDLIM5-212ENST00000509333 CADPS2Q86UW7 1296 aa23.63■■□□□ 1.37
PDLIM5-212ENST00000509333 TMEM132EQ6IEE7 984 aa23.62■■□□□ 1.37
PDLIM5-212ENST00000509333 TRIM26Q12899 539 aaPredicted RBP23.59■■□□□ 1.37
PDLIM5-212ENST00000509333 CFAP70Q5T0N1 1121 aa23.59■■□□□ 1.37
PDLIM5-212ENST00000509333 ROBO2Q9HCK4 1378 aa23.58■■□□□ 1.37
PDLIM5-212ENST00000509333 DCAF11Q8TEB1 546 aa23.58■■□□□ 1.37
PDLIM5-212ENST00000509333 STAC3Q96MF2 364 aa23.58■■□□□ 1.37
PDLIM5-212ENST00000509333 KDM2AQ9Y2K7 1162 aa23.58■■□□□ 1.37
PDLIM5-212ENST00000509333 XRN1Q8IZH2 1706 aaKnown RBP23.58■■□□□ 1.37
PDLIM5-212ENST00000509333 STK26Q9P289 416 aa23.57■■□□□ 1.36
PDLIM5-212ENST00000509333 PIK3C2GO75747 1445 aa23.56■■□□□ 1.36
PDLIM5-212ENST00000509333 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
PDLIM5-212ENST00000509333 ABCC11Q96J66 1382 aa23.54■■□□□ 1.36
PDLIM5-212ENST00000509333 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
PDLIM5-212ENST00000509333 WAPLQ7Z5K2 1190 aa23.53■■□□□ 1.36
PDLIM5-212ENST00000509333 SIRT1Q96EB6 747 aa23.53■■□□□ 1.36
PDLIM5-212ENST00000509333 NRXN1Q9ULB1 1477 aa23.53■■□□□ 1.36
PDLIM5-212ENST00000509333 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
PDLIM5-212ENST00000509333 IFT172Q9UG01 1749 aa23.53■■□□□ 1.36
PDLIM5-212ENST00000509333 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
PDLIM5-212ENST00000509333 PRAG1Q86YV5 1406 aa23.51■■□□□ 1.35
PDLIM5-212ENST00000509333 PTCH1Q13635 1447 aa23.5■■□□□ 1.35
PDLIM5-212ENST00000509333 MYOM2P54296 1465 aa23.49■■□□□ 1.35
PDLIM5-212ENST00000509333 BRINP3Q76B58 766 aa23.49■■□□□ 1.35
PDLIM5-212ENST00000509333 DISP3Q9P2K9 1392 aa23.49■■□□□ 1.35
PDLIM5-212ENST00000509333 DCCP43146 1447 aa23.49■■□□□ 1.35
PDLIM5-212ENST00000509333 ADGRL3Q9HAR2 1447 aa23.49■■□□□ 1.35
PDLIM5-212ENST00000509333 SIN3AQ96ST3 1273 aa23.47■■□□□ 1.35
PDLIM5-212ENST00000509333 YTHDC2Q9H6S0 1430 aaKnown RBP23.46■■□□□ 1.35
PDLIM5-212ENST00000509333 ROBO1Q9Y6N7 1651 aa23.46■■□□□ 1.35
PDLIM5-212ENST00000509333 TECPR2O15040 1411 aa23.45■■□□□ 1.34
PDLIM5-212ENST00000509333 MST1RQ04912 1400 aa23.44■■□□□ 1.34
PDLIM5-212ENST00000509333 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
PDLIM5-212ENST00000509333 PLEKHH1Q9ULM0 1364 aa23.42■■□□□ 1.34
PDLIM5-212ENST00000509333 ORAI2Q96SN7 254 aa23.4■■□□□ 1.34
PDLIM5-212ENST00000509333 L3MBTL2Q969R5 705 aa23.39■■□□□ 1.33
PDLIM5-212ENST00000509333 NEUROD1Q13562 356 aa23.38■■□□□ 1.33
PDLIM5-212ENST00000509333 PRAM1Q96QH2 718 aa23.38■■□□□ 1.33
PDLIM5-212ENST00000509333 TRAK1Q9UPV9 953 aa23.38■■□□□ 1.33
PDLIM5-212ENST00000509333 C1orf167Q5SNV9 1468 aa23.37■■□□□ 1.33
PDLIM5-212ENST00000509333 ILDR2Q71H61 639 aa23.37■■□□□ 1.33
PDLIM5-212ENST00000509333 DDX17Q92841 729 aaKnown RBP23.37■■□□□ 1.33
PDLIM5-212ENST00000509333 POGKQ9P215 609 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms