RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 HDGFP51858 240 aaKnown RBP29.76■■■□□ 2.35
HOXC6-204ENST00000509328 CCDC144AA2RUR9 1427 aa29.75■■■□□ 2.35
HOXC6-204ENST00000509328 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.72■■■□□ 2.35
HOXC6-204ENST00000509328 ZNF326Q5BKZ1 582 aaKnown RBP29.7■■■□□ 2.35
HOXC6-204ENST00000509328 PPP1R15AO75807 674 aaPredicted RBP29.68■■■□□ 2.34
HOXC6-204ENST00000509328 ANKRD30BQ9BXX2 1392 aa29.66■■■□□ 2.34
HOXC6-204ENST00000509328 NEXMIFQ5QGS0 1516 aa29.66■■■□□ 2.34
HOXC6-204ENST00000509328 PLEKHG1Q9ULL1 1385 aa29.65■■■□□ 2.34
HOXC6-204ENST00000509328 LTBP4Q8N2S1 1624 aa29.64■■■□□ 2.34
HOXC6-204ENST00000509328 ZNF335Q9H4Z2 1342 aaPredicted RBP29.64■■■□□ 2.34
HOXC6-204ENST00000509328 NUTM2DQ5VT03 806 aaPredicted RBP29.62■■■□□ 2.33
HOXC6-204ENST00000509328 PPLO60437 1756 aa29.62■■■□□ 2.33
HOXC6-204ENST00000509328 SPATA31E1Q6ZUB1 1445 aa29.61■■■□□ 2.33
HOXC6-204ENST00000509328 BCANQ96GW7 911 aa29.6■■■□□ 2.33
HOXC6-204ENST00000509328 RPGRIP1LQ68CZ1 1315 aa29.6■■■□□ 2.33
HOXC6-204ENST00000509328 SLC26A8Q96RN1 970 aa29.56■■■□□ 2.32
HOXC6-204ENST00000509328 IFT172Q9UG01 1749 aa29.56■■■□□ 2.32
HOXC6-204ENST00000509328 STRCP1A6NGW2 1772 aa29.55■■■□□ 2.32
HOXC6-204ENST00000509328 CERKQ8TCT0 537 aa29.54■■■□□ 2.32
HOXC6-204ENST00000509328 SENP3Q9H4L4 574 aaPredicted RBP29.54■■■□□ 2.32
HOXC6-204ENST00000509328 DIP2AQ14689 1571 aa29.54■■■□□ 2.32
HOXC6-204ENST00000509328 CPS1P31327 1500 aa29.54■■■□□ 2.32
HOXC6-204ENST00000509328 SETBP1Q9Y6X0 1596 aa29.53■■■□□ 2.32
HOXC6-204ENST00000509328 VGFO15240 615 aaPredicted RBP29.53■■■□□ 2.32
HOXC6-204ENST00000509328 RGL3Q3MIN7 710 aa29.53■■■□□ 2.32
HOXC6-204ENST00000509328 NRXN3Q9Y4C0 1643 aa29.53■■■□□ 2.32
HOXC6-204ENST00000509328 ADAMTS13Q76LX8 1427 aa29.51■■■□□ 2.31
HOXC6-204ENST00000509328 TBX22Q9Y458 520 aa29.5■■■□□ 2.31
HOXC6-204ENST00000509328 CHD2O14647 1828 aaKnown RBP29.48■■■□□ 2.31
HOXC6-204ENST00000509328 DHX57Q6P158 1386 aaKnown RBP29.48■■■□□ 2.31
HOXC6-204ENST00000509328 PCGF6Q9BYE7 350 aa29.47■■■□□ 2.31
HOXC6-204ENST00000509328 IQSEC2Q5JU85 1478 aa29.46■■■□□ 2.31
HOXC6-204ENST00000509328 NWD1Q149M9 1564 aa29.44■■■□□ 2.3
HOXC6-204ENST00000509328 KCNA6P17658 529 aa29.44■■■□□ 2.3
HOXC6-204ENST00000509328 PIK3R4Q99570 1358 aa29.42■■■□□ 2.3
HOXC6-204ENST00000509328 SETD1AO15047 1707 aaKnown RBP29.4■■■□□ 2.3
HOXC6-204ENST00000509328 LRRC7Q96NW7 1537 aa29.39■■■□□ 2.3
HOXC6-204ENST00000509328 ADGRF5Q8IZF2 1346 aa29.39■■■□□ 2.3
HOXC6-204ENST00000509328 ALKQ9UM73 1620 aa29.38■■■□□ 2.29
HOXC6-204ENST00000509328 MYOM2P54296 1465 aa29.38■■■□□ 2.29
HOXC6-204ENST00000509328 NKTRP30414 1462 aaKnown RBP29.37■■■□□ 2.29
HOXC6-204ENST00000509328 XIRP1Q702N8 1843 aaKnown RBP29.35■■■□□ 2.29
HOXC6-204ENST00000509328 NRXN1Q9ULB1 1477 aa29.34■■■□□ 2.29
HOXC6-204ENST00000509328 METP08581 1390 aa29.33■■■□□ 2.29
HOXC6-204ENST00000509328 PIK3C2GO75747 1445 aa29.33■■■□□ 2.29
HOXC6-204ENST00000509328 XRN1Q8IZH2 1706 aaKnown RBP29.31■■■□□ 2.28
HOXC6-204ENST00000509328 PTPRUQ92729 1446 aa29.31■■■□□ 2.28
HOXC6-204ENST00000509328 STAC3Q96MF2 364 aa29.31■■■□□ 2.28
HOXC6-204ENST00000509328 DCAF11Q8TEB1 546 aa29.3■■■□□ 2.28
HOXC6-204ENST00000509328 PROSER2Q86WR7 435 aaPredicted RBP29.29■■■□□ 2.28
HOXC6-204ENST00000509328 FBXO41Q8TF61 875 aa29.29■■■□□ 2.28
HOXC6-204ENST00000509328 AMOTL2Q9Y2J4 779 aa29.29■■■□□ 2.28
HOXC6-204ENST00000509328 LAMC1P11047 1609 aa29.29■■■□□ 2.28
HOXC6-204ENST00000509328 SIN3AQ96ST3 1273 aa29.28■■■□□ 2.28
HOXC6-204ENST00000509328 KDM2AQ9Y2K7 1162 aa29.26■■■□□ 2.27
HOXC6-204ENST00000509328 TMEM94Q12767 1356 aa29.26■■■□□ 2.27
HOXC6-204ENST00000509328 NEUROD1Q13562 356 aa29.22■■■□□ 2.27
HOXC6-204ENST00000509328 C14orf93Q9H972 538 aaKnown RBP29.22■■■□□ 2.27
HOXC6-204ENST00000509328 NCOA3Q9Y6Q9 1424 aa29.2■■■□□ 2.26
HOXC6-204ENST00000509328 UBAP1LF5GYI3 381 aa29.19■■■□□ 2.26
HOXC6-204ENST00000509328 RBM33Q96EV2 1170 aaKnown RBP29.19■■■□□ 2.26
HOXC6-204ENST00000509328 ASXL1Q8IXJ9 1541 aa29.19■■■□□ 2.26
HOXC6-204ENST00000509328 PRAG1Q86YV5 1406 aa29.18■■■□□ 2.26
HOXC6-204ENST00000509328 CFAP70Q5T0N1 1121 aa29.17■■■□□ 2.26
HOXC6-204ENST00000509328 TOM1O60784 492 aa29.16■■■□□ 2.26
HOXC6-204ENST00000509328 ILDR1Q86SU0 546 aaPredicted RBP29.16■■■□□ 2.26
HOXC6-204ENST00000509328 KNDC1Q76NI1 1749 aa29.15■■■□□ 2.26
HOXC6-204ENST00000509328 PTCH1Q13635 1447 aa29.15■■■□□ 2.26
HOXC6-204ENST00000509328 TMEM132EQ6IEE7 984 aa29.14■■■□□ 2.26
HOXC6-204ENST00000509328 L3MBTL2Q969R5 705 aa29.14■■■□□ 2.26
HOXC6-204ENST00000509328 LRPPRCP42704 1394 aaKnown RBP29.13■■■□□ 2.25
HOXC6-204ENST00000509328 MSH6P52701 1360 aa29.13■■■□□ 2.25
HOXC6-204ENST00000509328 KIAA1210Q9ULL0 1709 aa29.12■■■□□ 2.25
HOXC6-204ENST00000509328 YTHDC2Q9H6S0 1430 aaKnown RBP29.11■■■□□ 2.25
HOXC6-204ENST00000509328 TECPR2O15040 1411 aa29.11■■■□□ 2.25
HOXC6-204ENST00000509328 C14orf37Q86TY3 774 aa29.1■■■□□ 2.25
HOXC6-204ENST00000509328 ABCC11Q96J66 1382 aa29.1■■■□□ 2.25
HOXC6-204ENST00000509328 ROBO2Q9HCK4 1378 aa29.1■■■□□ 2.25
HOXC6-204ENST00000509328 ADGRB1O14514 1584 aa29.09■■■□□ 2.25
HOXC6-204ENST00000509328 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.09■■■□□ 2.25
HOXC6-204ENST00000509328 STK26Q9P289 416 aa29.08■■■□□ 2.25
HOXC6-204ENST00000509328 CLSPNQ9HAW4 1339 aa29.06■■■□□ 2.24
HOXC6-204ENST00000509328 C19orf44Q9H6X5 657 aa29.06■■■□□ 2.24
HOXC6-204ENST00000509328 NALCNQ8IZF0 1738 aa29.06■■■□□ 2.24
HOXC6-204ENST00000509328 TONSLQ96HA7 1378 aa29.05■■■□□ 2.24
HOXC6-204ENST00000509328 ADGRL3Q9HAR2 1447 aa29.03■■■□□ 2.24
HOXC6-204ENST00000509328 PIP4K2BP78356 416 aa29.02■■■□□ 2.24
HOXC6-204ENST00000509328 SIRT1Q96EB6 747 aa29.01■■■□□ 2.23
HOXC6-204ENST00000509328 DCCP43146 1447 aa29.01■■■□□ 2.23
HOXC6-204ENST00000509328 DLC1Q96QB1 1528 aa29■■■□□ 2.23
HOXC6-204ENST00000509328 SCAF1Q9H7N4 1312 aaKnown RBP29■■■□□ 2.23
HOXC6-204ENST00000509328 FAM135BQ49AJ0 1406 aa29■■■□□ 2.23
HOXC6-204ENST00000509328 ATF3P18847 181 aa28.99■■■□□ 2.23
HOXC6-204ENST00000509328 CADPS2Q86UW7 1296 aa28.99■■■□□ 2.23
HOXC6-204ENST00000509328 TRPM1Q7Z4N2 1603 aa28.98■■■□□ 2.23
HOXC6-204ENST00000509328 CCER1Q8TC90 406 aaPredicted RBP28.97■■■□□ 2.23
HOXC6-204ENST00000509328 WAPLQ7Z5K2 1190 aa28.96■■■□□ 2.23
HOXC6-204ENST00000509328 SLAIN2Q9P270 581 aa28.95■■■□□ 2.22
HOXC6-204ENST00000509328 PLEKHH1Q9ULM0 1364 aa28.94■■■□□ 2.22
HOXC6-204ENST00000509328 NBPF1Q3BBV0 1214 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms