RNA–Protein interactions for RNA: ENST00000509312.2

DDX4-209, Transcript of DEAD-box helicase 4, humanhuman

TSL 5

Gene DDX4, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-209ENST00000509312 HRO43593 1189 aa13.59□□□□□ -0.23
DDX4-209ENST00000509312 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
DDX4-209ENST00000509312 FAM98CQ17RN3 349 aaKnown RBP13.56□□□□□ -0.24
DDX4-209ENST00000509312 SWT1Q5T5J6 900 aaKnown RBP13.54□□□□□ -0.24
DDX4-209ENST00000509312 NBPF3Q9H094 633 aa13.54□□□□□ -0.24
DDX4-209ENST00000509312 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
DDX4-209ENST00000509312 DDX11L8A8MPP1 907 aa13.51□□□□□ -0.25
DDX4-209ENST00000509312 SAMD7Q7Z3H4 446 aa13.51□□□□□ -0.25
DDX4-209ENST00000509312 LAPTM4BQ86VI4 370 aa13.51□□□□□ -0.25
DDX4-209ENST00000509312 MRPL50Q8N5N7 158 aaKnown RBP13.51□□□□□ -0.25
DDX4-209ENST00000509312 ZFRQ96KR1 1074 aaKnown RBP13.51□□□□□ -0.25
DDX4-209ENST00000509312 BEGAINQ9BUH8 593 aa13.51□□□□□ -0.25
DDX4-209ENST00000509312 DDRGK1Q96HY6 314 aa13.5□□□□□ -0.25
DDX4-209ENST00000509312 CD46P15529 392 aa13.48□□□□□ -0.25
DDX4-209ENST00000509312 SLC10A3P09131 477 aa13.47□□□□□ -0.25
DDX4-209ENST00000509312 SULF1Q8IWU6 871 aa13.44□□□□□ -0.26
DDX4-209ENST00000509312 RDH13Q8NBN7 331 aa13.43□□□□□ -0.26
DDX4-209ENST00000509312 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
DDX4-209ENST00000509312 STAC3Q96MF2 364 aa13.41□□□□□ -0.26
DDX4-209ENST00000509312 RNF40O75150 1001 aa13.39□□□□□ -0.27
DDX4-209ENST00000509312 SPIRE2Q8WWL2 714 aa13.39□□□□□ -0.27
DDX4-209ENST00000509312 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
DDX4-209ENST00000509312 BCAMP50895 628 aa13.38□□□□□ -0.27
DDX4-209ENST00000509312 LRCH3Q96II8 777 aa13.38□□□□□ -0.27
DDX4-209ENST00000509312 GOLGA8CPA6NN73 597 aa13.37□□□□□ -0.27
DDX4-209ENST00000509312 GCGRP47871 477 aa13.37□□□□□ -0.27
DDX4-209ENST00000509312 MYSM1Q5VVJ2 828 aa13.37□□□□□ -0.27
DDX4-209ENST00000509312 SLF2Q8IX21 1173 aa13.37□□□□□ -0.27
DDX4-209ENST00000509312 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.37□□□□□ -0.27
DDX4-209ENST00000509312 ANKK1Q8NFD2 765 aa13.36□□□□□ -0.27
DDX4-209ENST00000509312 WNT2BQ93097 391 aa13.36□□□□□ -0.27
DDX4-209ENST00000509312 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
DDX4-209ENST00000509312 SOWAHBA6NEL2 793 aa13.34□□□□□ -0.27
DDX4-209ENST00000509312 SH3D19Q5HYK7 790 aa13.34□□□□□ -0.27
DDX4-209ENST00000509312 PROCA1Q8NCQ7 364 aaPredicted RBP13.33□□□□□ -0.28
DDX4-209ENST00000509312 GTF3C3Q9Y5Q9 886 aa13.33□□□□□ -0.28
DDX4-209ENST00000509312 CFHP08603 1231 aa13.32□□□□□ -0.28
DDX4-209ENST00000509312 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
DDX4-209ENST00000509312 NUTM1Q86Y26 1132 aa13.32□□□□□ -0.28
DDX4-209ENST00000509312 RSPH6AQ9H0K4 717 aa13.32□□□□□ -0.28
DDX4-209ENST00000509312 GOPCQ9HD26 462 aa13.32□□□□□ -0.28
DDX4-209ENST00000509312 MOXD2PA6NHM9 499 aa13.31□□□□□ -0.28
DDX4-209ENST00000509312 KDM4AO75164 1064 aa13.31□□□□□ -0.28
DDX4-209ENST00000509312 NDUFV2P19404 249 aa13.31□□□□□ -0.28
DDX4-209ENST00000509312 SKIV2LQ15477 1246 aaKnown RBP13.31□□□□□ -0.28
DDX4-209ENST00000509312 HPS5Q9UPZ3 1129 aa13.31□□□□□ -0.28
DDX4-209ENST00000509312 SLC4A3P48751 1232 aa13.3□□□□□ -0.28
DDX4-209ENST00000509312 HLA-CQ95604 372 aa13.3□□□□□ -0.28
DDX4-209ENST00000509312 KCTD12Q96CX2 325 aaKnown RBP13.3□□□□□ -0.28
DDX4-209ENST00000509312 LIMD1Q9UGP4 676 aa13.3□□□□□ -0.28
DDX4-209ENST00000509312 FUT2Q10981 343 aa13.28□□□□□ -0.28
DDX4-209ENST00000509312 PPP4CP60510 307 aa13.27□□□□□ -0.29
DDX4-209ENST00000509312 FBXO31Q5XUX0 539 aaPredicted RBP13.27□□□□□ -0.29
DDX4-209ENST00000509312 THSD4Q6ZMP0 1018 aa13.27□□□□□ -0.29
DDX4-209ENST00000509312 RIC3Q7Z5B4 369 aa13.27□□□□□ -0.29
DDX4-209ENST00000509312 WBP1LQ9NX94 342 aa13.27□□□□□ -0.29
DDX4-209ENST00000509312 HOXA2O43364 376 aa13.26□□□□□ -0.29
DDX4-209ENST00000509312 GUCA2AQ02747 115 aa13.26□□□□□ -0.29
DDX4-209ENST00000509312 PCMTD1Q96MG8 357 aaPredicted RBP13.26□□□□□ -0.29
DDX4-209ENST00000509312 TSR3Q9UJK0 312 aaKnown RBP13.26□□□□□ -0.29
DDX4-209ENST00000509312 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
DDX4-209ENST00000509312 APLP1P51693 650 aa13.25□□□□□ -0.29
DDX4-209ENST00000509312 DIXDC1Q155Q3 683 aa13.25□□□□□ -0.29
DDX4-209ENST00000509312 RSBN1LQ6PCB5 846 aaPredicted RBP13.25□□□□□ -0.29
DDX4-209ENST00000509312 PCDHB15Q9Y5E8 787 aa13.25□□□□□ -0.29
DDX4-209ENST00000509312 SPTLC1O15269 473 aa13.24□□□□□ -0.29
DDX4-209ENST00000509312 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
DDX4-209ENST00000509312 ACTN4O43707 911 aaKnown RBP13.22□□□□□ -0.29
DDX4-209ENST00000509312 USP46P62068 366 aa13.22□□□□□ -0.29
DDX4-209ENST00000509312 PUS10Q3MIT2 529 aaKnown RBP13.22□□□□□ -0.29
DDX4-209ENST00000509312 PCDHGC3Q9UN70 934 aa13.22□□□□□ -0.29
DDX4-209ENST00000509312 CSPP1Q1MSJ5 1256 aa13.21□□□□□ -0.29
DDX4-209ENST00000509312 KMT5BQ4FZB7 885 aa13.21□□□□□ -0.29
DDX4-209ENST00000509312 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.29
DDX4-209ENST00000509312 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
DDX4-209ENST00000509312 ATP6V1AP38606 617 aa13.19□□□□□ -0.3
DDX4-209ENST00000509312 QPCTQ16769 361 aa13.19□□□□□ -0.3
DDX4-209ENST00000509312 FDX1P10109 184 aa13.18□□□□□ -0.3
DDX4-209ENST00000509312 PTPN5P54829 565 aa13.18□□□□□ -0.3
DDX4-209ENST00000509312 SPNS2Q8IVW8 549 aa13.18□□□□□ -0.3
DDX4-209ENST00000509312 NECTIN2Q92692 538 aa13.18□□□□□ -0.3
DDX4-209ENST00000509312 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
DDX4-209ENST00000509312 MORN1Q5T089 497 aa13.17□□□□□ -0.3
DDX4-209ENST00000509312 GJA5P36382 358 aa13.16□□□□□ -0.3
DDX4-209ENST00000509312 CABLES1Q8TDN4 633 aa13.16□□□□□ -0.3
DDX4-209ENST00000509312 TUSC1Q2TAM9 212 aa13.15□□□□□ -0.3
DDX4-209ENST00000509312 SLC27A5Q9Y2P5 690 aa13.14□□□□□ -0.31
DDX4-209ENST00000509312 LILRB3O75022 631 aa13.13□□□□□ -0.31
DDX4-209ENST00000509312 RTL5Q5HYW3 569 aaPredicted RBP13.13□□□□□ -0.31
DDX4-209ENST00000509312 SYMPKQ92797 1274 aaKnown RBP13.13□□□□□ -0.31
DDX4-209ENST00000509312 HRCP23327 699 aa13.12□□□□□ -0.31
DDX4-209ENST00000509312 GRIPAP1Q4V328 841 aa13.12□□□□□ -0.31
DDX4-209ENST00000509312 BLOC1S3Q6QNY0 202 aa13.12□□□□□ -0.31
DDX4-209ENST00000509312 PRR14Q9BWN1 585 aa13.12□□□□□ -0.31
DDX4-209ENST00000509312 PCDHB3Q9Y5E6 796 aa13.11□□□□□ -0.31
DDX4-209ENST00000509312 RFC5P40937 340 aa13.1□□□□□ -0.31
DDX4-209ENST00000509312 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
DDX4-209ENST00000509312 SCUBE3Q8IX30 993 aa13.09□□□□□ -0.31
DDX4-209ENST00000509312 RNF19BQ6ZMZ0 732 aa13.08□□□□□ -0.32
DDX4-209ENST00000509312 NUTM2BA6NNL0 878 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms