RNA–Protein interactions for RNA: ENST00000509220.1

COMMD8-202, Transcript of COMM domain containing 8, humanhuman

TSL 2

Gene COMMD8, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-202ENST00000509220 CHGAP10645 457 aaKnown RBP23.58■■□□□ 1.37
COMMD8-202ENST00000509220 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.58■■□□□ 1.37
COMMD8-202ENST00000509220 PLEKHG1Q9ULL1 1385 aa23.55■■□□□ 1.36
COMMD8-202ENST00000509220 LRRC7Q96NW7 1537 aa23.55■■□□□ 1.36
COMMD8-202ENST00000509220 PPP1R15AO75807 674 aaPredicted RBP23.54■■□□□ 1.36
COMMD8-202ENST00000509220 TRPM2O94759 1503 aa23.54■■□□□ 1.36
COMMD8-202ENST00000509220 SLC26A8Q96RN1 970 aa23.53■■□□□ 1.36
COMMD8-202ENST00000509220 SLC4A1APQ9BWU0 796 aaKnown RBP23.53■■□□□ 1.36
COMMD8-202ENST00000509220 ACIN1Q9UKV3 1341 aaKnown RBP23.53■■□□□ 1.36
COMMD8-202ENST00000509220 TOM1O60784 492 aa23.52■■□□□ 1.36
COMMD8-202ENST00000509220 BCANQ96GW7 911 aa23.52■■□□□ 1.36
COMMD8-202ENST00000509220 KCNA6P17658 529 aa23.51■■□□□ 1.35
COMMD8-202ENST00000509220 CLTCL1P53675 1640 aa23.48■■□□□ 1.35
COMMD8-202ENST00000509220 TBX22Q9Y458 520 aa23.47■■□□□ 1.35
COMMD8-202ENST00000509220 NWD1Q149M9 1564 aa23.45■■□□□ 1.34
COMMD8-202ENST00000509220 SETD5Q9C0A6 1442 aa23.45■■□□□ 1.34
COMMD8-202ENST00000509220 KIF1BO60333 1816 aa23.45■■□□□ 1.34
COMMD8-202ENST00000509220 NUTM2DQ5VT03 806 aaPredicted RBP23.44■■□□□ 1.34
COMMD8-202ENST00000509220 DIP2AQ14689 1571 aa23.44■■□□□ 1.34
COMMD8-202ENST00000509220 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
COMMD8-202ENST00000509220 ZNF326Q5BKZ1 582 aaKnown RBP23.43■■□□□ 1.34
COMMD8-202ENST00000509220 XIRP1Q702N8 1843 aaKnown RBP23.43■■□□□ 1.34
COMMD8-202ENST00000509220 ADAMTS13Q76LX8 1427 aa23.42■■□□□ 1.34
COMMD8-202ENST00000509220 CHD2O14647 1828 aaKnown RBP23.42■■□□□ 1.34
COMMD8-202ENST00000509220 MPHOSPH9Q99550 1183 aa23.41■■□□□ 1.34
COMMD8-202ENST00000509220 ALKQ9UM73 1620 aa23.41■■□□□ 1.34
COMMD8-202ENST00000509220 PIK3R4Q99570 1358 aa23.4■■□□□ 1.34
COMMD8-202ENST00000509220 PIP4K2BP78356 416 aa23.4■■□□□ 1.34
COMMD8-202ENST00000509220 TMEM94Q12767 1356 aa23.4■■□□□ 1.34
COMMD8-202ENST00000509220 PROSER2Q86WR7 435 aaPredicted RBP23.39■■□□□ 1.33
COMMD8-202ENST00000509220 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
COMMD8-202ENST00000509220 NEXMIFQ5QGS0 1516 aa23.38■■□□□ 1.33
COMMD8-202ENST00000509220 SETBP1Q9Y6X0 1596 aa23.37■■□□□ 1.33
COMMD8-202ENST00000509220 FOXD1Q16676 465 aa23.36■■□□□ 1.33
COMMD8-202ENST00000509220 RPGRIP1LQ68CZ1 1315 aa23.34■■□□□ 1.33
COMMD8-202ENST00000509220 RAB3GAP2Q9H2M9 1393 aa23.34■■□□□ 1.33
COMMD8-202ENST00000509220 NRXN3Q9Y4C0 1643 aa23.33■■□□□ 1.33
COMMD8-202ENST00000509220 CCDC144AA2RUR9 1427 aa23.33■■□□□ 1.32
COMMD8-202ENST00000509220 VGFO15240 615 aaPredicted RBP23.32■■□□□ 1.32
COMMD8-202ENST00000509220 NCOA3Q9Y6Q9 1424 aa23.32■■□□□ 1.32
COMMD8-202ENST00000509220 HSPA1LP34931 641 aa23.3■■□□□ 1.32
COMMD8-202ENST00000509220 HRCP23327 699 aa23.29■■□□□ 1.32
COMMD8-202ENST00000509220 MSH6P52701 1360 aa23.28■■□□□ 1.32
COMMD8-202ENST00000509220 RBM33Q96EV2 1170 aaKnown RBP23.28■■□□□ 1.32
COMMD8-202ENST00000509220 AMOTL2Q9Y2J4 779 aa23.28■■□□□ 1.32
COMMD8-202ENST00000509220 PTPRUQ92729 1446 aa23.26■■□□□ 1.31
COMMD8-202ENST00000509220 PPLO60437 1756 aa23.26■■□□□ 1.31
COMMD8-202ENST00000509220 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
COMMD8-202ENST00000509220 SPATA31E1Q6ZUB1 1445 aa23.25■■□□□ 1.31
COMMD8-202ENST00000509220 METP08581 1390 aa23.24■■□□□ 1.31
COMMD8-202ENST00000509220 XRN1Q8IZH2 1706 aaKnown RBP23.23■■□□□ 1.31
COMMD8-202ENST00000509220 C19orf44Q9H6X5 657 aa23.2■■□□□ 1.3
COMMD8-202ENST00000509220 ANKRD30BQ9BXX2 1392 aa23.19■■□□□ 1.3
COMMD8-202ENST00000509220 RGL3Q3MIN7 710 aa23.19■■□□□ 1.3
COMMD8-202ENST00000509220 C14orf37Q86TY3 774 aa23.19■■□□□ 1.3
COMMD8-202ENST00000509220 SLAIN2Q9P270 581 aa23.18■■□□□ 1.3
COMMD8-202ENST00000509220 SETD1AO15047 1707 aaKnown RBP23.18■■□□□ 1.3
COMMD8-202ENST00000509220 DISP3Q9P2K9 1392 aa23.17■■□□□ 1.3
COMMD8-202ENST00000509220 IFT172Q9UG01 1749 aa23.16■■□□□ 1.3
COMMD8-202ENST00000509220 CADPS2Q86UW7 1296 aa23.16■■□□□ 1.3
COMMD8-202ENST00000509220 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.16■■□□□ 1.3
COMMD8-202ENST00000509220 ROBO1Q9Y6N7 1651 aa23.16■■□□□ 1.3
COMMD8-202ENST00000509220 ATF3P18847 181 aa23.14■■□□□ 1.29
COMMD8-202ENST00000509220 ADGRF5Q8IZF2 1346 aa23.13■■□□□ 1.29
COMMD8-202ENST00000509220 DCCP43146 1447 aa23.13■■□□□ 1.29
COMMD8-202ENST00000509220 PRAG1Q86YV5 1406 aa23.13■■□□□ 1.29
COMMD8-202ENST00000509220 PTCH1Q13635 1447 aa23.11■■□□□ 1.29
COMMD8-202ENST00000509220 PIK3C2GO75747 1445 aa23.08■■□□□ 1.28
COMMD8-202ENST00000509220 ADGRL3Q9HAR2 1447 aa23.08■■□□□ 1.28
COMMD8-202ENST00000509220 MED1Q15648 1581 aaPredicted RBP23.06■■□□□ 1.28
COMMD8-202ENST00000509220 MYOM2P54296 1465 aa23.05■■□□□ 1.28
COMMD8-202ENST00000509220 ROBO2Q9HCK4 1378 aa23.05■■□□□ 1.28
COMMD8-202ENST00000509220 NRXN1Q9ULB1 1477 aa23.05■■□□□ 1.28
COMMD8-202ENST00000509220 NALCNQ8IZF0 1738 aa23.02■■□□□ 1.28
COMMD8-202ENST00000509220 PHLPP1O60346 1717 aa23.02■■□□□ 1.28
COMMD8-202ENST00000509220 C14orf93Q9H972 538 aaKnown RBP23.01■■□□□ 1.27
COMMD8-202ENST00000509220 LRPPRCP42704 1394 aaKnown RBP23.01■■□□□ 1.27
COMMD8-202ENST00000509220 TECPR2O15040 1411 aa23■■□□□ 1.27
COMMD8-202ENST00000509220 MST1RQ04912 1400 aa23■■□□□ 1.27
COMMD8-202ENST00000509220 STAC3Q96MF2 364 aa23■■□□□ 1.27
COMMD8-202ENST00000509220 ABCC11Q96J66 1382 aa23■■□□□ 1.27
COMMD8-202ENST00000509220 LAMC1P11047 1609 aa22.99■■□□□ 1.27
COMMD8-202ENST00000509220 AHDC1Q5TGY3 1603 aaPredicted RBP22.98■■□□□ 1.27
COMMD8-202ENST00000509220 BRINP3Q76B58 766 aa22.98■■□□□ 1.27
COMMD8-202ENST00000509220 ASXL1Q8IXJ9 1541 aa22.98■■□□□ 1.27
COMMD8-202ENST00000509220 KNDC1Q76NI1 1749 aa22.96■■□□□ 1.27
COMMD8-202ENST00000509220 TMEM132EQ6IEE7 984 aa22.96■■□□□ 1.27
COMMD8-202ENST00000509220 COL16A1Q07092 1604 aaPredicted RBP22.96■■□□□ 1.27
COMMD8-202ENST00000509220 YTHDC2Q9H6S0 1430 aaKnown RBP22.95■■□□□ 1.26
COMMD8-202ENST00000509220 STK26Q9P289 416 aa22.95■■□□□ 1.26
COMMD8-202ENST00000509220 JCADQ9P266 1359 aa22.94■■□□□ 1.26
COMMD8-202ENST00000509220 CFAP70Q5T0N1 1121 aa22.94■■□□□ 1.26
COMMD8-202ENST00000509220 ILDR2Q71H61 639 aa22.94■■□□□ 1.26
COMMD8-202ENST00000509220 SIRT1Q96EB6 747 aa22.94■■□□□ 1.26
COMMD8-202ENST00000509220 DHX57Q6P158 1386 aaKnown RBP22.93■■□□□ 1.26
COMMD8-202ENST00000509220 DCAF11Q8TEB1 546 aa22.93■■□□□ 1.26
COMMD8-202ENST00000509220 C1orf167Q5SNV9 1468 aa22.92■■□□□ 1.26
COMMD8-202ENST00000509220 CDC42BPGQ6DT37 1551 aa22.9■■□□□ 1.26
COMMD8-202ENST00000509220 WAPLQ7Z5K2 1190 aa22.9■■□□□ 1.26
COMMD8-202ENST00000509220 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms