RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 SPHKAPQ2M3C7 1700 aa36.44■■■■□ 3.42
PROM1-209ENST00000508940 SLC26A8Q96RN1 970 aa36.41■■■■□ 3.42
PROM1-209ENST00000508940 ZFYVE9O95405 1425 aa36.41■■■■□ 3.42
PROM1-209ENST00000508940 SENP3Q9H4L4 574 aaPredicted RBP36.38■■■■□ 3.41
PROM1-209ENST00000508940 PLEKHG1Q9ULL1 1385 aa36.36■■■■□ 3.41
PROM1-209ENST00000508940 STRCP1A6NGW2 1772 aa36.35■■■■□ 3.41
PROM1-209ENST00000508940 NUTM2DQ5VT03 806 aaPredicted RBP36.35■■■■□ 3.41
PROM1-209ENST00000508940 TOM1O60784 492 aa36.34■■■■□ 3.41
PROM1-209ENST00000508940 ZNF326Q5BKZ1 582 aaKnown RBP36.33■■■■□ 3.41
PROM1-209ENST00000508940 ACIN1Q9UKV3 1341 aaKnown RBP36.32■■■■□ 3.4
PROM1-209ENST00000508940 LRRC7Q96NW7 1537 aa36.31■■■■□ 3.4
PROM1-209ENST00000508940 TRPM2O94759 1503 aa36.3■■■■□ 3.4
PROM1-209ENST00000508940 KCNA6P17658 529 aa36.3■■■■□ 3.4
PROM1-209ENST00000508940 SETD5Q9C0A6 1442 aa36.29■■■■□ 3.4
PROM1-209ENST00000508940 SCAF1Q9H7N4 1312 aaKnown RBP36.26■■■■□ 3.39
PROM1-209ENST00000508940 CLTCL1P53675 1640 aa36.26■■■■□ 3.39
PROM1-209ENST00000508940 MPHOSPH9Q99550 1183 aa36.25■■■■□ 3.39
PROM1-209ENST00000508940 TBX22Q9Y458 520 aa36.24■■■■□ 3.39
PROM1-209ENST00000508940 PIP4K2BP78356 416 aa36.23■■■■□ 3.39
PROM1-209ENST00000508940 FOXD1Q16676 465 aa36.22■■■■□ 3.39
PROM1-209ENST00000508940 KIF1BO60333 1816 aa36.2■■■■□ 3.39
PROM1-209ENST00000508940 PROSER2Q86WR7 435 aaPredicted RBP36.2■■■■□ 3.39
PROM1-209ENST00000508940 RAB3GAP2Q9H2M9 1393 aa36.14■■■■□ 3.38
PROM1-209ENST00000508940 ADAMTS13Q76LX8 1427 aa36.13■■■■□ 3.37
PROM1-209ENST00000508940 TMEM94Q12767 1356 aa36.13■■■■□ 3.37
PROM1-209ENST00000508940 DIP2AQ14689 1571 aa36.11■■■■□ 3.37
PROM1-209ENST00000508940 NKTRP30414 1462 aaKnown RBP36.11■■■■□ 3.37
PROM1-209ENST00000508940 NWD1Q149M9 1564 aa36.1■■■■□ 3.37
PROM1-209ENST00000508940 CHD2O14647 1828 aaKnown RBP36.09■■■■□ 3.37
PROM1-209ENST00000508940 CCDC144AA2RUR9 1427 aa36.08■■■■□ 3.37
PROM1-209ENST00000508940 PIK3R4Q99570 1358 aa36.07■■■■□ 3.36
PROM1-209ENST00000508940 RBM33Q96EV2 1170 aaKnown RBP36.07■■■■□ 3.36
PROM1-209ENST00000508940 RPGRIP1LQ68CZ1 1315 aa36.07■■■■□ 3.36
PROM1-209ENST00000508940 XIRP1Q702N8 1843 aaKnown RBP36.06■■■■□ 3.36
PROM1-209ENST00000508940 VGFO15240 615 aaPredicted RBP36.06■■■■□ 3.36
PROM1-209ENST00000508940 NEXMIFQ5QGS0 1516 aa36.06■■■■□ 3.36
PROM1-209ENST00000508940 SETBP1Q9Y6X0 1596 aa36.02■■■■□ 3.36
PROM1-209ENST00000508940 ALKQ9UM73 1620 aa36.01■■■■□ 3.35
PROM1-209ENST00000508940 AMOTL2Q9Y2J4 779 aa36■■■■□ 3.35
PROM1-209ENST00000508940 HSPA1LP34931 641 aa35.99■■■■□ 3.35
PROM1-209ENST00000508940 HRCP23327 699 aa35.97■■■■□ 3.35
PROM1-209ENST00000508940 MSH6P52701 1360 aa35.97■■■■□ 3.35
PROM1-209ENST00000508940 RGL3Q3MIN7 710 aa35.96■■■■□ 3.35
PROM1-209ENST00000508940 C14orf37Q86TY3 774 aa35.96■■■■□ 3.35
PROM1-209ENST00000508940 NRXN3Q9Y4C0 1643 aa35.96■■■■□ 3.35
PROM1-209ENST00000508940 PTPRUQ92729 1446 aa35.91■■■■□ 3.34
PROM1-209ENST00000508940 NCOA3Q9Y6Q9 1424 aa35.91■■■■□ 3.34
PROM1-209ENST00000508940 METP08581 1390 aa35.9■■■■□ 3.34
PROM1-209ENST00000508940 PPLO60437 1756 aa35.88■■■■□ 3.33
PROM1-209ENST00000508940 SPATA31E1Q6ZUB1 1445 aa35.87■■■■□ 3.33
PROM1-209ENST00000508940 C19orf44Q9H6X5 657 aa35.83■■■■□ 3.33
PROM1-209ENST00000508940 ANKRD30BQ9BXX2 1392 aa35.83■■■■□ 3.33
PROM1-209ENST00000508940 FAM135BQ49AJ0 1406 aa35.82■■■■□ 3.32
PROM1-209ENST00000508940 SLAIN2Q9P270 581 aa35.81■■■■□ 3.32
PROM1-209ENST00000508940 ATF3P18847 181 aa35.8■■■■□ 3.32
PROM1-209ENST00000508940 XRN1Q8IZH2 1706 aaKnown RBP35.8■■■■□ 3.32
PROM1-209ENST00000508940 ADGRF5Q8IZF2 1346 aa35.79■■■■□ 3.32
PROM1-209ENST00000508940 DISP3Q9P2K9 1392 aa35.78■■■■□ 3.32
PROM1-209ENST00000508940 CADPS2Q86UW7 1296 aa35.78■■■■□ 3.32
PROM1-209ENST00000508940 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.71■■■■□ 3.31
PROM1-209ENST00000508940 IFT172Q9UG01 1749 aa35.7■■■■□ 3.31
PROM1-209ENST00000508940 ROBO1Q9Y6N7 1651 aa35.7■■■■□ 3.31
PROM1-209ENST00000508940 SETD1AO15047 1707 aaKnown RBP35.69■■■■□ 3.3
PROM1-209ENST00000508940 DCCP43146 1447 aa35.63■■■■□ 3.29
PROM1-209ENST00000508940 PTCH1Q13635 1447 aa35.63■■■■□ 3.29
PROM1-209ENST00000508940 PIK3C2GO75747 1445 aa35.61■■■■□ 3.29
PROM1-209ENST00000508940 ROBO2Q9HCK4 1378 aa35.61■■■■□ 3.29
PROM1-209ENST00000508940 ADGRL3Q9HAR2 1447 aa35.6■■■■□ 3.29
PROM1-209ENST00000508940 STK26Q9P289 416 aa35.59■■■■□ 3.29
PROM1-209ENST00000508940 TMEM132EQ6IEE7 984 aa35.57■■■■□ 3.28
PROM1-209ENST00000508940 MYOM2P54296 1465 aa35.56■■■■□ 3.28
PROM1-209ENST00000508940 C14orf93Q9H972 538 aaKnown RBP35.56■■■■□ 3.28
PROM1-209ENST00000508940 PRAG1Q86YV5 1406 aa35.56■■■■□ 3.28
PROM1-209ENST00000508940 KDM2AQ9Y2K7 1162 aa35.54■■■■□ 3.28
PROM1-209ENST00000508940 LRPPRCP42704 1394 aaKnown RBP35.53■■■■□ 3.28
PROM1-209ENST00000508940 DCAF11Q8TEB1 546 aa35.53■■■■□ 3.28
PROM1-209ENST00000508940 MED1Q15648 1581 aaPredicted RBP35.52■■■■□ 3.28
PROM1-209ENST00000508940 CFAP70Q5T0N1 1121 aa35.52■■■■□ 3.28
PROM1-209ENST00000508940 NRXN1Q9ULB1 1477 aa35.52■■■■□ 3.28
PROM1-209ENST00000508940 PHLPP1O60346 1717 aa35.52■■■■□ 3.28
PROM1-209ENST00000508940 NALCNQ8IZF0 1738 aa35.51■■■■□ 3.27
PROM1-209ENST00000508940 BRINP3Q76B58 766 aa35.5■■■■□ 3.27
PROM1-209ENST00000508940 STAC3Q96MF2 364 aa35.5■■■■□ 3.27
PROM1-209ENST00000508940 MST1RQ04912 1400 aa35.49■■■■□ 3.27
PROM1-209ENST00000508940 ABCC11Q96J66 1382 aa35.49■■■■□ 3.27
PROM1-209ENST00000508940 DHX57Q6P158 1386 aaKnown RBP35.48■■■■□ 3.27
PROM1-209ENST00000508940 PHF23Q9BUL5 403 aaPredicted RBP35.46■■■■□ 3.27
PROM1-209ENST00000508940 YTHDC2Q9H6S0 1430 aaKnown RBP35.46■■■■□ 3.27
PROM1-209ENST00000508940 WAPLQ7Z5K2 1190 aa35.45■■■■□ 3.27
PROM1-209ENST00000508940 TECPR2O15040 1411 aa35.45■■■■□ 3.27
PROM1-209ENST00000508940 ASXL1Q8IXJ9 1541 aa35.45■■■■□ 3.27
PROM1-209ENST00000508940 LAMC1P11047 1609 aa35.45■■■■□ 3.27
PROM1-209ENST00000508940 JCADQ9P266 1359 aa35.4■■■■□ 3.26
PROM1-209ENST00000508940 ILDR2Q71H61 639 aa35.39■■■■□ 3.26
PROM1-209ENST00000508940 SIRT1Q96EB6 747 aa35.39■■■■□ 3.26
PROM1-209ENST00000508940 KNDC1Q76NI1 1749 aa35.39■■■■□ 3.26
PROM1-209ENST00000508940 AHDC1Q5TGY3 1603 aaPredicted RBP35.39■■■■□ 3.26
PROM1-209ENST00000508940 C1orf167Q5SNV9 1468 aa35.37■■■■□ 3.25
PROM1-209ENST00000508940 TRIM26Q12899 539 aaPredicted RBP35.37■■■■□ 3.25
PROM1-209ENST00000508940 COL16A1Q07092 1604 aaPredicted RBP35.36■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms